Cyprinodon tularosa (White Sands pupfish): 119789478
Help
Entry
119789478 CDS
T07496
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04530
Tight junction
ctul04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119789478
09142 Cell motility
04810 Regulation of actin cytoskeleton
119789478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119789478
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
119789478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PH_10
PDZ_2
PDZ_6
PH_11
Motif
Other DBs
NCBI-GeneID:
119789478
NCBI-ProteinID:
XP_038150301
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MGNTESQNREHALYSTGRGYLSRKHMSRSLRISNKQSRRSRHASSGKMEHRNSETSTRSS
STPSIPQSLADNGLEPFNETRNFPDFGSPIWVDRVAMSLRPVSFHNDLASPSVHMNTMRI
TLPGPTAEETQDEEVYTNEVKYIQQTLECSRETVSFKKRSKSADTWQDDSLEFSLSDVSQ
DNLTSTEEIIDMANEREFPDCEGHMQFSPTDSADRSNSLDELYSNTSPASRQTHGRYAKW
NDTNRSMGEEEDGKMLSPSEEDGTAYGAYTLPCRRSHCLSEGLSNLQATMCTSMQGRRAK
TIQDVTAGDGSEYEDSGIDGVMLEVEHQPRRYKTMSASFSVCSMHGRSVLVGSDSGSSSG
GGASEGVQGVYENFRQELQMSSCQTESLEEAGSALSDEQSTMSSAYQSDLLLSVVQGMVR
KAGKLAVKNFLVHKKNKKVESATRRKWKTYWVSLKGCTLFFYDTDGRSAIDNNSIPKHAI
WVENSIVQAVPEHPKKDFVFCLSNSLGDAYLFQTCSQTELENWITAIHSACATAVARQHH
REDTVRLLRAEIKKLEQKIDMDEKMKKMGEMQLSAVTDTKKRKTILEQIFLWEQNLEQFH
MDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLTMGRLGIFSVSSFHALVAARTESGVR
RRTQAMSHSCSKRKSRFSSLWGVDTTSKKKTKAHPTVSQVFADEEPEKKPVDRVFVDSVK
ENTKSEDGSVKSLPRANVDSDMWVPDHLTPSWVCLPNDQPVLNTIQPGDSALCVLESICK
THELDPTKHYLRLKFFIENQVQFYIPKPEEDIYDLLYKEIELCSKITKVIQFDRDESCMI
GYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKTAFS
QVSLALTVNTLPSVDRRQLCYLPPRRSDAAEDLYTDIFSQSQEEILDDGVGLLLESCGDS
PDDDSEIFSELDECRKSTEQVAAFCRSLHDMNPSECMSSSPSPDSPFPPTVTPRQLSDAD
KLRKVICELVETERTYVKDLNCLIGRYLTPLQKENFLTQDELDVLFGNLPEMVEFQVEFL
KTLEDGTRLVPDLERLESVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKA
KTDLNFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDV
AIKAMNKVASHINEMQKIHEEFGAVFDQLITEQSSEKKEVADLSMGDLLLHNTVTWINPP
VSLGKWKKEPQMATFVFKTAVVFVCKEESKQKKKIGGSHRVSVSSEEKDPFRFRHMIPTD
ALQIRSMSNTDGESSAMCEVVHTKSESEGRPERTFHLCCSSPESRKEFLKTFHSILREKH
RRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTIDTD
IVFDGDPEQQDLTSPQESDSVPPQQKDEQLAGDTDRWVEEQFDLEEYEDQEEMKETDILS
DDDDEFSQTPRALSEEAELESPLRALSLEVSETDSRKNLQSPAENKEPDEEKISDTGKSS
ITHNSGNQAEKDEVWVRRELSGSSSDSAT
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggggaacactgagagccaaaacagggaacatgccctctacagtaccgggcggggctat
ttgtcacgaaagcacatgtctcggtctctacgcatttccaacaaacagtctagacgctct
cgccatgcttcctcaggcaaaatggagcacagaaattctgagacaagtactcgctcgagt
agcacgcctagcatcccacaatccctagctgataatggtttggaaccattcaacgaaaca
agaaacttcccagactttggaagtcccatttgggtggatcgtgtggccatgagtttgcgc
cctgtgtcctttcataatgatttggccagtccctcagtgcatatgaatacaatgcgcata
accttacctggtcctactgcggaagagacgcaggatgaggaagtgtacacaaatgaggtg
aaatatatccaacagactttagagtgctccagagagacagtgagcttcaaaaagagatca
aaatctgcagacacctggcaagatgacagcctcgaattctccctgtccgatgtcagtcaa
gataatttaaccagcactgaagagattatcgacatggctaatgagagagaattccctgac
tgtgaaggccacatgcagttcagcccgacagactctgcagacaggtcaaactcactggat
gaactgtacagtaacacaagcccagcctccaggcagacccacggccgctatgccaagtgg
aacgacaccaacaggtctatgggagaagaggaggatggtaagatgctgtcaccatcagag
gaggatggaaccgcatatggcgcgtacactcttccctgccgacgttcccactgcctgtct
gaaggcctgagtaacctccaagctacaatgtgcacgagtatgcagggcaggagggcaaag
actatacaggatgtcacggccggggatggcagcgaatatgaagacagcggaatcgatggg
gtgatgttggaggtagagcaccagcctcggcgctacaagacaatgtccgcctccttctct
gtctgttccatgcatggaaggagcgtgctcgttggcagtgacagcggcagcagcagtggc
ggcggtgccagcgagggtgtgcagggggtttacgagaacttccgtcaagaacttcaaatg
agttcctgccagacggagagcttggaggaagctggctccgccctgagcgatgagcagagc
accatgagctctgcctaccagtctgatttgttgctcagcgttgtccaggggatggtgcgc
aaagcggggaaacttgctgttaagaacttccttgtgcacaaaaagaacaagaaagttgaa
tctgccacaagacgcaagtggaagacttactgggtgtccttgaaaggctgtactctcttt
ttttatgacactgatggccgttcagctattgacaacaacagtattcccaagcatgccata
tgggtagagaacagtattgtccaagctgtgccagagcatcccaaaaaagactttgtgttc
tgcctcagcaattctttgggtgatgcttatctcttccagacctgcagccagacagagcta
gaaaactggatcacagccatccactcagcatgcgctactgctgttgctcgccagcatcac
agagaggacaccgttcggctgctccgtgctgaaatcaagaaactagagcagaagatcgac
atggatgaaaagatgaagaagatgggagagatgcaactgtcagctgtcactgacaccaag
aagaggaagacaattctggaacaaatcttcttgtgggagcagaacctggagcagtttcac
atggatctgtttcgctttagatgctacctggccagcttgcaaggaggagagctgcccaac
cctaagcgcctcttggccttcgcctctcgccccaccaagctgacaatgggcagactgggc
atattttcggtctcttccttccatgcactggtggcagctcgaacagagagcggagtgaga
cgcagaacgcaagcaatgtctcattcctgcagcaaacgcaaaagcaggttttcctccctc
tggggtgtagacactacctcaaagaagaaaacgaaagcccaccctacggttagccaggtg
tttgctgatgaagagccagagaaaaagccagtagatcgtgtttttgtggattctgtaaag
gaaaacacaaaatccgaagacggaagtgtgaaaagtcttcctcgagccaatgttgacagt
gacatgtgggtccccgaccacctcactccttcctgggtctgtctgccaaatgaccaacct
gtgttaaacactatccagccaggagactctgcactgtgtgttcttgaatctatatgcaag
acccatgagctggacccaaccaaacactacttgagacttaaattcttcatagaaaaccaa
gtgcaattctacattccaaagccagaagaggatatatacgacttgttgtacaaagaaatt
gagctctgctctaagataacaaaagtaatccagtttgacagagatgaatcctgtatgatt
ggttatgggttttctatctcagtggtggaggaggatggagttcaacaactttacatcact
gatgtgaaggctgggggattagcctttgcaaagggtctgaatgccggagatgaaattctt
caactgaatggaaaagactctcacagtctcaatttctcagacatgaagactgcattctct
caagtgtctctagctttgaccgtcaacactctgccttctgtggaccggcgtcagctttgc
tatcttccaccgcgccgctccgatgcagcagaagacctttacaccgatatcttctcccaa
agtcaagaggagattctggatgatggtgtgggactgttgctggagagctgtggagacagc
ccggatgatgattcagagatcttcagtgagcttgatgagtgcagaaagagcaccgagcag
gtcgctgctttttgtcgcagtctccatgacatgaatccgtcagagtgcatgtcctcttcg
ccgagcccggactcacccttcccgcctaccgtgactcctcggcagctgtctgatgccgac
aagctccgcaaagtgatctgtgaactagtggagaccgagcgcacctatgtcaaagatctc
aattgtcttattgggagatatttaaccccgctgcagaaagagaactttctcacacaggat
gagctggatgttctgtttggtaatttacccgaaatggtggaattccaggtagagtttcta
aaaactcttgaagatggaaccagattagttccagatctggagagactggagagtgtggat
cagtttaagaaaatactcttttctctaggaggctctttcttgtactatgcagaccgtttt
aagatctacagtgctttctgcgccagccacaccaaggtcccaaaggttcttgtaaaggcc
aaaactgaccttaatttcaaggcctttcttgatgagcgaaatcccaagcagcagcactcc
tccaccctagaatcctatttaatcaaacccatccagagggtgctaaaatacccccttctg
ttgagggagctctactccctgactgacccagacagcgaggaacactaccatttggatgtt
gctataaaggctatgaacaaggttgccagccacatcaatgaaatgcagaagatccatgag
gagtttggagcagtgtttgaccagctaatcactgagcagagcagtgaaaagaaagaggtg
gctgatctatcgatgggcgatctgctgctccacaacacagtgacatggatcaaccctcct
gtttcccttggaaaatggaagaaagaaccacagatggcaacatttgttttcaaaacagct
gtggtctttgtatgcaaagaagagtctaagcagaagaagaaaattggtggttcccatcga
gtttctgtttcctcagaagaaaaagatccttttcgattccgtcacatgatccccactgat
gcccttcaaataagatccatgtcaaacacagatggggaaagttctgctatgtgtgaagta
gttcacacaaaatccgagtcagagggaagaccagagaggacttttcacctgtgctgcagc
tctccggagagcagaaaggaattcctgaagacgttccactccatcttgagggaaaagcac
cgccgacagctcttaaagacggagagtttacccctgaaccagcagtatgtgccatttgga
ggaaagcgactgtgtgccctgaagggagcccgtccagccataaatagagccgcatctgcc
cctactaggactctgggcagaagaaagctggtgcgcaaccgtttcaccatagacactgac
attgtttttgatggggacccagaacagcaggacctcacttcaccacaggaatcagactct
gttcctccgcagcagaaggatgagcagttggcaggtgatacagaccgctgggtagaggag
cagtttgacctggaagagtatgaagaccaggaagagatgaaggagacagacatcctaagt
gatgatgatgacgaatttagccaaacacccagggctctgtctgaagaagctgagctggag
agccccctgagggctttatctctggaggtttcagaaacagacagtaggaagaatctgcag
tccccagctgagaacaaggaacccgatgaagagaagatatcagacacagggaagagctcc
ataactcacaactctgggaatcaagcagagaaagatgaggtttgggttcgaagggagcta
tcaggttcatcctcagacagcgctacataa
DBGET
integrated database retrieval system
