Cyprinodon tularosa (White Sands pupfish): 119792184
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Entry
119792184 CDS
T07496
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119792184 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119792184 (usp47)
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119792184 (usp47)
Peptidases and inhibitors [BR:
ctul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119792184 (usp47)
Ubiquitin system [BR:
ctul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119792184 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119792184
NCBI-ProteinID:
XP_038154613
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MEMVPSEENQFVPKEGFFWSCRQSVVDEIKRISQIHNAAEEPRVLCIIQDITSAKTINER
LTLNLPASTTLSKLYEDVAQKAGYVNGTFDLVWGKTLNMAPLEHNSEMSLSDSGFEPGGK
KNFLQVSDKDGEQPQVASDESGTAESSGLEDSSQERFIGPLQRDGSAGGSGDYSSPSYSY
SSILSKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPHQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMAFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTEKAL
KPKSLLTFELFSVMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKFLAVEDFPEHIKSLVQKEKESEEHEKRL
REIERNTCKIKLFCVHPVKMMMESKLEVHKDKTLREATEMAYKLMELEGVVSPDCCRLVK
YDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHV
VDLKTETIGLPVSVRAYLNQSISEFKQLLAQATGLSAETMRVVLERCYNDLRLLYIPHKT
LKAEGFFRSNKVFVESSELTDHQVAFTESLLWKLLDRHGNTIRLFVLLPEQSPGTLANRT
LCQKAGEDSDGPFEGSKGIRKSVDAILEASTEKLKNLSLQQQGSSASDSQKSSDTSDFEH
IESPTQEAESTSSLCMAADSRELENRITESSEENQFVCEERSDSEVNNDRSTSSVDSDIL
SSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEYDDN
GKSQAEAQYLYFRAEPYSQDDASCDTQKCLVVHVDKRITLAAFKQNLEPYVGVPSSQFKV
FRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVFQLLVNEPEPCKFLV
DTVFAKGMTVRQSKEEVLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDINI
SSNWEVFLEVLDDSEKMKSMSQLAILTRRWSPATMKLGPFQEVILESSTVEELKEKLSEM
SGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVTTLNVWPLYICDDGAVVFYRDSRE
EPLELSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPVRDPGQD
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagggcttcttttggagt
tgcagacagagtgttgttgatgaaataaagaggatttcccagatacataatgcagctgag
gagccaagagtgctgtgcataattcaggacattaccagtgcaaagacgatcaatgagagg
ctgactctcaatctgcctgcctccactactctctctaaactttatgaggatgttgcccaa
aaagctggatatgtgaatggcacttttgatttggtctgggggaaaactctgaacatggca
ccgctggagcataacagtgagatgtccctgtctgattctggctttgaacctggtggtaag
aaaaattttctccaggtttcagataaagacggagagcaaccacaagttgcatcggatgaa
tcaggaacagcagaaagcagtgggctggaggatagttctcaggagcggttcatcgggcct
ctgcagagagatggcagcgctggtggcagcggtgactacagcagcccatcatactcctac
tcatccatcctcagcaaatctgatacaggttatgttggtttggttaaccaagcaatgact
tgctatttaaacagtctcctccaaactctttttatgactccggaattcagaaacgctctc
tacaactgggagtttgaggagtcggaagaggatcctgtcacaagtattccccatcagctg
caaaggctctttgttctgctgcaaacaagtaagaaacgggcgattgaaacaaccgacgtg
actcggagcttcgggtgggatagcagcgaggcctggcagcagcatgacgtccaggaactg
tgcagggtcatgtttgatgccctggagcagaagtggaagcagactgaacaggctgacctg
atcaaccagctgtaccagggaaagctgaaggattatgtacgttgcttagagtgtggatac
gagagctggagaatcgacacctaccttgacatccctctggtgataagaccctttggagcc
agtcaggcctatggaagtgtggaggaggccttgcaggcgttcatccagcctgaaaccttg
gatggccccaaccagtacttctgtgagcgctgcaaaaagaaatgtgatgcccgaaagggt
ctgaggtttctgcactttccctacctgctgacattacagcttaaaaggtttgattttgac
tacaccactatgcatcgcatcaagctcaacgaccgcatggctttccccgaggagctcgac
atgagcccgttcattgatgtggaagatgagaaatcacctcagacagagagctgcactgat
agcggggcagagaatgaaggcagttgccacagtgaccaaatgagcaacgatttttccacc
gatgactgtgttgatgagggtatctgcctggacagcaccagtagcacagagaaggcactg
aagccaaagagcttgctgacctttgagttattctctgtcatggtccattcggggagtgct
gcaggcggacactactacgcctatatcaagtccttcagtgacggccaatggtacagcttc
aacgatcagcatgttagcaagatcacccaggatgatatcaggaagacatatggggggtcc
tcagggagcagaggctattattccagtgcctttgcaagttctacaaatgcttacatgctg
atttatagattgaaagatccctcaaggaacgcaaagttcctagctgtggaggatttccca
gagcacattaagagtttggttcagaaggagaaagagtcagaggagcatgagaagcgcctg
agggagattgaacgcaacacttgcaagatcaagctcttctgtgtgcatcctgtcaaaatg
atgatggagagtaagttggaggttcataaggataaaacccttagagaagcaacagaaatg
gcctacaagctgatggagctggaaggagttgtctctcctgactgctgtcgcttagtaaag
tatgatgagtttcacgagtacctggagcggtcctacgaaggcgaggaagacactcctatg
gggcttctgcttggaggcgtgaagtcctcctacatgtttgacttgctccttgagacacgt
cgtcctgatcaggtctttcagccgtacaaacctggagaggtaatggtgaaggttcatgtt
gttgatctgaagactgagaccatcggccttccagtcagcgttcgagcgtacctgaaccaa
tccatatccgaattcaaacaacttttagcacaggcaacaggtctatctgcagaaacaatg
cgagtggtcttggagcgatgctataatgaccttaggcttctctacattccacacaagacg
ctgaaagccgagggattcttcaggagtaacaaggtttttgtcgagagctcagagttgacg
gatcatcaggttgcttttactgaatcgctcttgtggaaactattggaccgccatgggaac
acgatccgtctgtttgtcctgctgcctgagcagtctcctggtactttggccaacagaact
ctttgccaaaaagcaggagaagactctgatggtccctttgaaggatcaaagggtatcagg
aaatctgtagacgctatactggaggccagcacagagaagttaaagaacctgtctctacag
cagcagggttccagtgctagtgacagccagaaaagctccgacaccagcgactttgaacac
attgagtcaccgactcaggaggcggaatcgacctcttcactgtgcatggccgcagacagc
agggagctagagaaccggataactgagtcctctgaggagaaccagtttgtttgcgaggag
cggtcagactctgaggtgaacaacgaccgcagcactagctcagtggacagcgacatcctg
agctccagccacagcagcgacacgctgtgcaacgctgacagcggccccatccagctggcc
aacggcctggattcacacagtatcaccagcagtcgacgttccaaagccaacgagggcaaa
aaggagacttgggacacggcagaggaagactctgggacggacagcgagtatgacgacaac
gggaagagtcaggcagaagctcagtacttgtacttcagagcagagccttattctcaggat
gacgcttcctgtgacacgcagaaatgtttagtggttcatgtggacaaaagaataacgtta
gcagcattcaaacagaacctggagccgtacgtcggagtcccttcgtcccagttcaaggtg
tttcgagtgtatgccaacaaccaggagtttgagagtgtacggctcaacgagacgctctca
tcattctcagatgacaacaagataaccattcgactgggaagagcattaaaaaagggtgaa
tacagagtcaaagtgtttcagctgcttgtcaacgaaccagagccatgcaagttccttgtg
gacacagtgtttgctaaaggcatgactgtaagacagtccaaagaggaggtgctccctcag
ttaaaagagcagtgtaagctcgacctcagcatcgacagggttcgtctcaggaaaaagaca
tggaaaaacccagggacggtgtttttggattaccatgtctatgaggaagacatcaacatt
tcctctaactgggaggttttcctggaagttcttgatgattcagagaagatgaagtccatg
tcacagctggctattttgactcggaggtggagccctgctactatgaagctgggacccttc
caggaggtgattctggagagcagcactgtagaagaactcaaggaaaagctcagtgaaatg
agcggtattcctttggaaaacttggaatttgcaaagggtaggggaacatttccatgtgat
atatccgtgttggaaatccaccaggatctggactggaacccaaaggtgacgactctgaat
gtgtggcctctatacatctgtgatgatggagccgtggtcttctacagagacagccgagaa
gaacctctggagctgtcggaggacgagcgtaatgagctgatgaagaaggagagcagccgt
ctgctaaagacaggacaccgcgtcagctactccccacgcaaagagaaggcgctaaagatc
tacctggacggcggccctgtgagggacccgggtcaggactga
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