KEGG   Cyprinodon tularosa (White Sands pupfish): 119795310
Entry
119795310         CDS       T07496                                 
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119795310 (vps28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ctul04131]
    119795310 (vps28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ctul04147]
    119795310 (vps28)
Membrane trafficking [BR:ctul04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    119795310 (vps28)
Exosome [BR:ctul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119795310 (vps28)
  Exosomal proteins of other body fluids (saliva and urine)
   119795310 (vps28)
  Exosomal proteins of colorectal cancer cells
   119795310 (vps28)
  Exosomal proteins of bladder cancer cells
   119795310 (vps28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 119795310
NCBI-ProteinID: XP_038159161
LinkDB
Position
Unknown
AA seq 223 aa
MFHGIAGSGGVGAAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVSPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDEFCRKYRLDCPLAMERIKEDRPITIK
DDKGNQNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLSTLSGMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcacggaatagcaggcagcggaggcgtgggggcagcaccagctaataaacctgag
ttgtacgaggaagtcaaactttacaaaaatgcacgggaacgagaaaagtatgacaacatg
gcagagttgtttgccgttgtaaagaccttgcaggcattggaaaaggcttacatcaaagac
tgtgtatcccccaatgagtacacagctgcatgctccagactcttggttcagtataaagct
gctttcaaacaggtccaaggctctgatgtggggtccattgatgaattttgcaggaaatac
agactcgactgccctcttgcaatggagaggattaaggaggatcggccaattaccatcaaa
gacgacaagggcaaccagaaccgttgtatcgcagatatagtttctctcttcatcactgtt
atggacaagctgagacttgagatcagagccatggatgagatccaaccagacctgagagag
ctgatggaaaccatgaataggatgagcaacatgcctccagactcagaggctaaggacaaa
gtgaatctctggttgtccactctcagcggtatgtctgcctcagatgagctggatgataat
caggttcggcagatgctcttcgatttggagtcggcctacaacgccttcaaccgattcctc
cactcctcctaa

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