Cyprinodon tularosa (White Sands pupfish): 119797327
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Entry
119797327 CDS
T07496
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119797327 (smc4)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
119797327 (smc4)
Condensin II
119797327 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
HMMR_N
AAA_29
HIP1_clath_bdg
ERM_helical
DUF4201
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119797327
NCBI-ProteinID:
XP_038162296
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MWINRRICRFHIMPSKTAKSSTASKREPKGKGLQPRDDSEGELDVPPQESQSNGQEEAPP
TTDPSQGEATEAADNRSLEEILASIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQI
LGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTV
EVHFQKIIDKEGDDYEVIPNSKFYVSRTANKDNSSYYNINGKRATFKEVGTLLRSHGIDL
DHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLSRRIELLNEQ
RGEKLNRVKLVEKEKNALEGEKNKAVEFLTLENEIFRNKSHLNQYYVHDLQKRVVDKEQE
KQKILEETKELTEKNAKLSEEIEKMNQELKNVEMKQSKINKYIETQKEKFTQLDLQDVEV
REKIKHSKSKNKAMQKQLEKDQKKLEEVRGIPASSEQAIAEATARKEDLEKQKAKEEEKL
KEVMESLKEETSGLQQDKEKKEKELMELSKAVNETRSQMDLAQSELDIYLSRHKTALSQL
NAAKQTLQTTSDTLQERRPAIKDLQVQIPLKEQELKKDQEELQQLMKVDNDTRHVVRELR
QKVDEAKSSLSSNRSRGKVLDALMQLKRSGKIPGIYGRLGDLGAIDEKYDVAISSCCGAL
DNIVVDTIDTAQKCVTFLKEQNIGVATFIGLDKMKVWEKNMAPIRTPENSPRLFDMVKVN
DESVRPAFYFALRDTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRVLKG
RMGSSIGTEVSQDELDRMESKLNEKVSKLQGCQERRLQLEENVQRLQPQLREMKNTLEKY
TNSMSSLADQETHLKLQLKELEANVLASAPDKAKQKQMEKSLEAFKKDFESASNKAGKVE
NEVKRLHNLIVDINSHKLKAQQDKLDKINKELDDCSSIITKAKVAIKTADRNLKKSEESV
SRIQGELEENEKLMTELTEKLKKLEDEAGEIMKACHEAEAALPEVREQYEKVSKEIKALQ
QQEHALKEESLNVRLSIEQIDATITKHNSKIKFWQDENAKLSLHTIEDQPAEELRVFPPA
ELEAIPDPNILVNKISTLENQCRQMKPNLGAIAEYMKKEELYLQRVAQLDEITAERDRFK
HAYEDLRKQRLNEFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPP
KKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQT
KNAQFIIISLRNNMFEIADRLIGIYKTHNTTKSVGINPKTIVFREHDAITA
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaatagaaggatttgcagatttcatatcatgccatctaaaacagcaaaaagt
tcaactgcctctaaaagggagccaaaagggaaagggctgcagcctcgggatgactctgag
ggagagctggatgtacccccccaagaaagccagtctaatggccaagaagaggcacccccg
acaactgatccgtctcagggggaagctactgaggcggcagataaccgaagtttggaggag
atcctcgccagcatccctccaccaccgcccccagcaatgaccaatgaaccaggcgctccg
cgcctaatgataacacatttagttaatcgcaattttaagtcatacgcaggggagcagatt
ttggggccttttcataagcgcttttcctgcatcattggtcccaatggaagtggaaagtcc
aatgtgatagattcaatgctctttgtgtttggatacagagctcaaaagatcagatcgaaa
aagctctcagttctgattcacagttctgataagcacaaggatgtgcaaagctgtactgtt
gaagtgcattttcaaaagattattgataaggagggagatgactacgaagtcatacccaac
agcaagttctatgtttccagaactgccaacaaagacaattcctcttactacaatatcaat
ggcaaaagggctacattcaaagaagttggcactttgctcaggagccatggtattgacctg
gaccacaacagatttttgatcttacagggtgaggtggagcagattgccatgatgaagcca
aaaggtcaaacggagcatgatgaggggatgcttgagtacttggaggatattatcggttcg
tgtcgtctcaaagaaccaatccaaacactgtctcgcagaattgagcttctcaatgagcaa
aggggagaaaagctcaatcgtgtaaaactggtagaaaaggagaaaaatgctttagaaggg
gaaaagaataaagcggtagagttcctgactttggaaaatgagatcttccgaaacaagagt
catctcaaccagtactacgttcatgatctgcaaaaacgtgtggtggataaagagcaggaa
aagcagaagatcttggaggaaacaaaggagctgacagaaaaaaatgctaagctatcagag
gagattgaaaaaatgaatcaagagctgaaaaatgtggagatgaaacaaagtaagatcaac
aagtacattgagacccagaaggaaaagttcacccagctggacttgcaggatgttgaagtg
cgtgagaagattaaacactccaagagcaagaacaaggccatgcagaagcagctggaaaaa
gaccagaaaaagctggaggaagtgcgaggtataccagctagcagtgagcaagctatcgct
gaagctacagcccgcaaagaagacctggagaagcagaaggcgaaagaagaagaaaaactg
aaagaagtgatggaaagcttgaaggaagagacgagtggattgcagcaggacaaagagaaa
aaagagaaagagctcatggaacttagcaaggcagtaaatgagactcggtctcaaatggac
cttgctcaatctgaactagacatctaccttagccgccataaaacggctctgagtcagctt
aatgcagctaagcagacgctccaaacgacctccgatacgctgcaggagcgccgacctgcc
atcaaagacctgcaggtccaaatccccctgaaggagcaggagctcaagaaggaccaggaa
gagttgcagcaactcatgaaggtggataatgacaccaggcatgtggtacgagaattacgg
caaaaggtggatgaagccaagagctctctttcctccaatcgcagtcgaggaaaagtcttg
gatgctctaatgcaactcaagaggagtggcaaaattccaggcatttacggaagattgggt
gatcttggagcaatagatgagaaatatgatgtggccatctcctcctgctgtggtgccctg
gacaacatagtggtggatacgatcgacaccgctcagaaatgtgtcactttcctcaaagaa
cagaatattggagtagccactttcatcggtcttgacaagatgaaggtatgggagaaaaac
atggctcccatccgcacgccagagaacagcccgcgtctctttgacatggtgaaagttaat
gacgagagcgtcagaccagctttctactttgccctgcgggacaccctggtagctcaagac
atggagcaggcaactagaatggctttccagaaggacaaacgctggagggtggtcactctg
aagggacagatcattgagatggcaggaacaatgactggaggcgggagagtcttaaaaggc
aggatgggatcttctatcggcacagaggtctcccaggatgagcttgaccgtatggagagc
aagctgaatgagaaagtgtcaaagctgcagggctgccaagagagaaggctgcagttggag
gagaatgtccaacgccttcagcctcagctcagagagatgaagaacacactggaaaaatac
accaacagcatgagcagtctggctgaccaggagacccacttaaaacttcagcttaaggag
cttgaagccaacgtgctggcatctgccccagacaaagccaagcagaaacagatggagaag
agcctggaggcattcaagaaagactttgagtcagcctccaataaggccggaaaggtggaa
aacgaggtaaaaagactccacaacttgattgtagacatcaacagccacaaactgaaagcc
cagcaggataaacttgacaagatcaacaaagagttagatgactgctcctcaatcatcacc
aaggccaaagtggccataaagacagctgatcgaaacttgaaaaagtctgaggagagcgtt
tcccgtatccaaggggagctggaggagaacgagaagctgatgactgagctcacagaaaaa
ctgaagaaactagaagatgaggccggggagatcatgaaagcctgtcatgaagcagaggca
gctcttcctgaggtgcgggagcagtatgagaaagtctccaaggagataaaggccctgcag
cagcaggagcacgcattgaaagaggagtctctcaacgtccgactttcgatcgagcagata
gacgccaccatcacaaagcacaacagcaagatcaagttctggcaggatgagaatgccaag
ctgtcccttcacaccattgaagaccaaccagcagaagagctccgtgtctttccccctgct
gagctggaagcgatcccagatccaaacatccttgtcaacaagattagcacgttggagaac
cagtgcagacagatgaagcccaatctaggagctattgcagagtacatgaagaaggaggag
ctgtacctgcagcgtgtcgcccagctggacgagatcacagcagagagggacaggttcaaa
cacgcctacgaagacctccgtaaacagaggcttaacgagttcatgaccgggttcaacatg
atcaccaacaagttgaaggagaactaccagatgctgacgctgggtggggatgcagagctg
gagctggtggacagcttggatcccttctctgagggaatcatgttcagtgttcgtcctccg
aagaaaagctggaaaaagatctttaacctgtcaggaggagaaaagaccctcagctctctg
gctttggttttcgctcttcatcactataaacccaccccactctacttcatggacgagata
gatgctgctctggacttcaagaacgtctccatcgttgcctgttacatttatgaacaaaca
aagaatgctcagttcatcatcatctcgttgaggaacaacatgtttgagatcgcagatcgc
ctcatcggcatctacaaaacacacaacacaaccaaaagtgtgggaatcaacccaaagacc
attgtgtttagagaacatgatgctataactgcataa
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