Cyprinodon tularosa (White Sands pupfish): 119798674
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Entry
119798674 CDS
T07496
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119798674
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119798674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Fip1
Prok-RING_4
DUF4239
Gp58
Motif
Other DBs
NCBI-GeneID:
119798674
NCBI-ProteinID:
XP_038164166
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MEQRGLLMEDQKFSCSICLDLLKDPVTIPCGHSYCMNCIKEHWKGEDESRIYSCPQCRTR
FRPKPVLQKNITLAELLEDLKKIGLQAAPVNHCYAGPEDVACDVCTERKRKAVKSCFTCS
ASYCENHLQPHYDAAPLQKHELLEPSKMLQENICSSHNKIMEIFCCTDQQCICYLCLMEE
HKGHETVSAAVQRYEKGKLRERRQQIQQRIQDQEKDVKLLQQEVEAINGSADKAVEDSEK
IFTDLIRLILKRSSDVKQQIRSQQQTEVSRVKELQKKLEQEITELKRKDAELEKLSITED
HTQFLQNYPSLSALSESTHSSSINIRPLRYFEDVTAAVVELREKLQDILRDTETNISLAV
TEVDVLLSEPKTRAGFLRHSLEITLDANTAHANLLLSEENKKVTVMEEQQPYPDHPNRFT
GWLQVLSRESLTGRCYWEVEWRGEKIDLAVSYKNVSRAGEQGECVFGFNENSWSLYCETN
NCKFYHNNIKTLVPGPVSSRIGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGAG
FYDDGDYAEFIKLI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagaggacttctgatggaagatcaaaaattctcctgttccatctgtttggat
ttactaaaggatccagtgactattccctgtggacacagctactgtatgaactgtattaaa
gaacactggaagggagaggatgagagccggatctacagctgccctcagtgcaggacacgt
ttcagaccgaagcctgtactgcagaaaaacatcacgttggcagaattactggaggatcta
aagaagataggactccaagctgcaccagttaatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgagaggaagaggaaagctgtcaagtcctgtttcacctgttca
gcttcttactgtgagaatcacctccaacctcattatgatgctgcaccattacagaagcat
gaactgctggagccctccaagatgctccaagagaacatttgctcatctcataataagatt
atggagatcttctgttgtactgatcagcagtgtatctgttatctctgcttaatggaggaa
cataaaggccacgaaacagtctcagctgcagtacaaaggtatgagaaggggaagctcagg
gagagacgacaacaaatccagcagagaatccaggaccaggagaaagatgtgaagctgctt
caacaggaggtggaggccatcaatggctctgctgataaagcagtggaggacagtgagaag
atcttcactgatctgatccgtctcatcctgaaaagaagctctgatgtgaagcagcagatc
agatcccagcagcaaactgaagtgagtcgagtcaaagagcttcagaagaagctggagcag
gagatcactgagctgaagaggaaagatgctgagctggagaagctctcaatcacagaggat
cacacccagtttctccagaactacccctcactgtcagcactcagtgagtctacacactca
tccagcatcaatattcgtcctctgagatactttgaggatgtgacagcagctgtggtggag
ctcagagagaaactacaggacatcctgagagacacagagacaaacatctcactagcagtc
actgaagtggatgttttactgtcagaaccaaagacaagagcaggatttttaagacattca
cttgaaataactttagatgcaaacacagcacacgcaaatcttctattatctgaggagaac
aaaaaagtaacagtaatggaagaacaacagccttatcctgatcatccaaacagatttact
ggttggcttcaggttctgagcagagagagtctgactggacgttgttactgggaggtggag
tggagaggagaaaagattgatttagcagtgtcatacaaaaatgtcagcagagcaggagag
cagggggaatgtgtgtttggtttcaatgaaaactcttggtcattgtactgtgaaacaaac
aattgcaaattttaccacaacaacattaaaactctagtaccgggtccagtttcctccaga
ataggagtgtatctggatcacagagcaggtattctgtctttctacagcgtctctgaaacc
atgactctcctccatagagtccagaccacattcactcagcctctatatgctggggctggg
ttttatgatgatggtgactatgcagagtttatcaaactgatctga
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