Clostridium tyrobutyricum: CTK_C11710
Help
Entry
CTK_C11710 CDS
T04331
Name
(GenBank) Rad3-like DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTK_C11710
09124 Replication and repair
03420 Nucleotide excision repair
CTK_C11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctyk03021
]
CTK_C11710
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C11710
Enzymes [BR:
ctyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CTK_C11710
Transcription machinery [BR:
ctyk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTK_C11710
DNA repair and recombination proteins [BR:
ctyk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTK_C11710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
ResIII
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AND84432
LinkDB
All DBs
Position
1129353..1131770
Genome browser
AA seq
805 aa
AA seq
DB search
MDQDVIKISVRNLVEFVLRQGDLDNRFTSNVRALEGTRVHQKIQQQYKDKIIGDKSATYN
CEVSLKYEIIYRKFKFLIEGRADGIILEDDCVTIDEIKTVTRPLEMIDATYNPLHLAQVK
CYAYIYAYENKLDYICVQLTYYNINDHKVKFIKEKINIEDLRRFFIDILDKYYKWVELKK
DWNDIRNKSIDDLKFPFKSYRTGQRKLAAVVYGTIRDKKRLFVQAPTGIGKTISTIFPSI
KALATQKLSTIFYLTAKTTTRATAEETLKIMFERGLRLKSITITAKEKVCLNDDTACNPE
HCEYARGHYNRVNEAIFEIINSEDLITRDKIIKYSKKFQICPFEFCLDTALFCDYVICDY
NYAFNPRVYLRRFFDESSEKNVLLIDEAHNLVDRSRDMFSAEIYKKSFLHIKKFIKKEDN
KILKCLNKINSYMLDLKKNCNLEFKDLKDKLSGDIVYIKKNIYAQKSKMSEIYFLLKNFS
SQIEEWMIKNAGQTGYDEILDEYFTVNNFIRIYEIYNDNFITYIENMAGDLKVKILCIDP
STLLDERMKSAEASILFSATLSPMNYFKDILGGRAEDYNMTLLCPFERRNREILISSNIS
TVYRSREESCLPIINYIKTVVSRRTGNYIVFFPSYGYMDRVYELFIEKFPDVKTSIQKSG
MSESEREKFLNDFKEDSKESFISFAVLGGLFSEGIDLKGDKLIGSIIVGVGLPKISFERD
IIMDFFNKKNGLGYEYSYMYPGMNKILQAAGRVIRTESDRGVILLIDKRFMTVKYKKLFP
REWYPNHIIDCEHDIESILKVFWDE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggatgtaataaagatatccgtgagaaatcttgtagaatttgtacttaggcag
ggtgatctagacaacaggtttaccagcaatgttagagcattggaaggtaccagagtacat
caaaagatacagcagcagtacaaagataagataataggagacaaaagcgccacttataat
tgtgaggtatcactaaaatatgaaataatatataggaaatttaaatttttaatagagggt
agagcagatggaataattttagaagacgattgtgtaactatagatgaaataaaaacagtg
acaagacctcttgaaatgatagatgcaacttacaatcccttgcatttagcacaggtaaaa
tgctatgcctatatatatgcatatgaaaataaacttgattatatatgtgtacaacttaca
tattataatataaatgaccataaagttaaatttataaaagaaaagatcaacatagaggat
cttaggcgtttttttattgatattttggataaatattataaatgggttgaacttaaaaaa
gattggaatgatattagaaataaatccatagatgatttaaagtttccatttaagagctat
agaactggtcagagaaagttggcagcagtagtttatggaacaataagggataaaaaaaga
ttgtttgttcaggcacctacgggtataggtaaaacaatatctacaattttcccgtcaata
aaggccctggctacccaaaagctttctacaatattttacctgacagctaaaactacaaca
agagctacagcagaagaaactttaaaaattatgtttgaacgtggtcttagattaaaaagt
ataactattacggcaaaagaaaaagtatgcttaaatgatgatacggcgtgtaatccggaa
cactgtgaatatgctagaggtcattataacagagtcaatgaagctatatttgaaattata
aattcagaggatttgataactagggacaaaatcataaaatattctaaaaagttccaaatt
tgtccttttgaattttgcctagatactgccctattctgtgactatgtaatatgcgactat
aattatgcctttaatcccagggtatatttaaggagattttttgatgaatcatcggaaaaa
aatgtacttttaattgatgaagcgcataatttagtagatagatcaagagatatgttttca
gcggaaatttataaaaaatcatttttgcatataaaaaagtttattaaaaaagaagataat
aaaatattaaagtgtctgaataaaataaattcttatatgcttgatttaaagaaaaattgt
aatttggaattcaaagatttaaaagataagttgtctggtgatatagtatatattaaaaaa
aacatatatgcgcaaaagagtaaaatgtcagaaatctattttttgcttaaaaacttttct
tcacaaatagaagaatggatgattaaaaatgctggtcaaacaggatatgatgaaatttta
gatgaatattttactgtaaataactttattagaatatatgagatatataatgataatttt
ataacttatatagaaaatatggcaggtgacttaaaggttaaaatattgtgtattgatcca
tcaactctacttgatgagagaatgaaaagtgcagaagcttccatacttttttcagctaca
ttatctccaatgaattattttaaagatatacttggaggcagagcagaggattataatatg
acacttttatgcccgtttgaaagaagaaatagggaaatcctgatatctagtaatatttca
acagtttatagaagcagggaagaaagttgtctgccaattataaactacataaagactgtt
gtttccaggagaacaggcaattatatagtttttttcccttcttatgggtatatggataga
gtatatgaactttttatagaaaagtttcctgatgtaaagacttcaatccagaaatctggc
atgagtgaatctgaaagagaaaaatttttaaatgatttcaaagaggactcaaaagaaagt
ttcatatcatttgcagtacttggaggattgttttcagaaggtatagatcttaaaggggat
aaattgataggaagtataatagtaggagtaggacttccaaaaatatcttttgaaagagat
ataataatggacttttttaataaaaagaatggcttgggatacgagtattcttatatgtat
cctggtatgaataaaatactccaggcggcaggtagagttataaggacagaaagcgataga
ggtgttatactcttaatagacaagaggtttatgacagttaagtataagaaattatttcca
agggaatggtatccaaatcatataatagattgtgaacacgatatagaaagtattttgaaa
gtattttgggacgaatag
DBGET
integrated database retrieval system
