Cuculus canorus (common cuckoo): 104055243
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Entry
104055243 CDS
T08597
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04512
ECM-receptor interaction
cuca04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104055243 (FREM1)
04518 Integrin signaling
104055243 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cuca04091
]
104055243 (FREM1)
Lectins [BR:
cuca04091
]
C-Type lectins
Lecticans
104055243 (FREM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104055243
NCBI-ProteinID:
XP_053909979
LinkDB
All DBs
Position
Z
Genome browser
AA seq
2190 aa
AA seq
DB search
MSGEVLSFLHNMKLLRRSCLFPLLAGVLRVVCSSFISVNLGVKVMKGQSVFLSEDDLKFS
IPREKDVCKVEVVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVMLRLYR
FTETETFVETFTLHVQLLEPDCNIIKMRSHALEVSEYYGLSRVIDKNVLTFDYDRKINLD
CTISIASLETHLPAHGQLITREVQQEQLRGDQLQTFFPGPKHSLGQECRNGSCMLGLGVI
NNTKVSCEEFLRMGIRYQHLDPPSPDIDYVPLRLDLTDRRSKTLHKTEYAWLPVQIKGAI
PNQIPKATPMAKYILEVDQFILTPITTIIIDAEDNETPKSLLVFNITKPPPRGFITHLSD
HTKAVGSFTWKDLNDMLIAYQPPNISHTERRNYEVEFQVHDFYFERSLPITVQLSIRTTD
TNAPRVSWNTGLSLLEGQSRPITWQHFQIVDNNSIQNVRLITVDGLQHGQLTVRGGKGFM
FTVSDIQAGVVRYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPRDDSPPFLISNVVI
EVHEGQMVLIQGSMLHASDIDSSDDYILFNITKPPQAGEIMKKPGPNLIGYSVNSFLQRD
LFNGIIYYHHLGGEVFEDSLEFVLCDSHDPPNLSEPQVMIVHIIPVDDQLPREAPGVTRH
LVVKETDIAHLTKKHLHFIDVEEQDRQLTYTITTPPFFSCMHGHSDAGKLFMVDNIPKLA
KDPAALPLKSFTQQAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITI
LPVDNQSPEVFTSHLRVEEGGLNPVTEGHILISDVDTREEQLFLLLQQQPQHGVVELDGI
PMNEGDRLSCEDLRNLAVRYQHDGSETLSDEVLFAATDGIHFVEFILQVKVVPVNDEPPI
MRTGLAPVLYCLEGEEVVLSSKYIYATDTDSDDLKLMFLLAHQPYHGVVRKAGIAVDRFS
QADVISGLVTYKHTSGEIGLDPSIEILTFIVSDGEAGLDAKDCCYDGPLSSPTPLHVPFP
VYDLNITVLPVDNQPPSITSGARFVVEEGSSAVLTINHLFATDADTTADDLEFVLVSPPQ
FGYLENILPSPGFEKSNIGISIASFQLKHLKSLNINYVQARHLRMEPTEDHFVLYVTDGL
HRSAETPFFVLINPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPQDHLIFAVVQ
RPSYGFLINGIHGNDVLHHKQLINHDHRIHGYLVHNFSLEVLKNGMKLMYVHDNSENLSD
SFKIQLSDGKHKVLRTISVKVIPVNDEKPVLSKKDDIEVNMGETQIISSAVLSAEDKDTT
REKIYYLFERLPENGQLQLKVGQGWVTLQTGMKCTQEELDANLVRYVHTGAIGSKNPDSF
TFYLWDGYNRSPATDFYINIKGMEKGDIDVFIKPLRVTKQDRVYITTDVLLALDGTDKPE
ELLYVITSPPQHGQIEYISYPGIPITSFSQMDVARQIVCYVHNTKSVVSEDTFRFIISNG
LRTKHGTFMISLEAVDQALPTLFRNMGLRLVEGAMALLSPDVLQLSDPDTAKENLTFLLA
QLPKYGHLYYRGAVLMKYNFTQQDVDNGDVAYKHQGGDSQIDKFTFTATDRTNQGFIVNG
RVQSEPVSFTIQVDRLDKTAPKIIRLHCFSDVELLKNDKYGIYITARSLKASDPNTEDDK
IIFKILRGPHYGYLENITTGALIQEGFSQKDLNSKVILYVINPLREVNSDNVEFQVTDMS
GNSAVPQRLELRWSRIEMQQTEYEVCESVGVVSLKITRAGHTAESAFIAVKVNEISATLG
KDFTVTPSKLVQFDPGMSTKTWNIAITYDRLEEDDEVFEVVLNSPVNAVLGTRTKAVVKI
LDSKGGQCSYSHSAGQRKHDFWGRGTWLPVSSSSSSPSRPGKAPLEGIPPPPFKGMRQHG
GNPQQEQSSANQSRTVLRVTGNGRIVHPSSVFRNGTDVVYKYHGMVSLKIEDDTSSAKAN
KKTQVSVIDQAQTQINVISSRKTEIPQADKAALASEPSSRHQDFYSFLKVCTPDLKGLLH
YEESTQKLFRCDGITWKEASTKKCPSGWSHHRGSCYFLVVNHKVTWNAAARACREQYQGS
LASVANEQHMQWLWDFSGRKPFWIGLSDQVNPGHWEWNGGEAVTYINWRRGSYHFPKRER
NCVLVQKRGKWQATDCWKVKRSRYICSRKL
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaagtcttgtcattcctacataatatgaagctcctcaggagaagctgtttg
tttccactgctagctggtgtactaagagttgtctgctcctcctttattagtgtcaacctt
ggtgtgaaagtgatgaagggacagtctgtctttctgtcagaagatgacctcaagttttcc
atccccagagagaaggatgtctgcaaagtagaagttgtgattaatgagccaataacacag
agggtcgggaaactaactcctcaggtttttgactgtcacttccttcctaatgaagtcaag
tacacccacaatggctgtcctattttagacgaagacacggtcatgcttaggctgtacagg
tttacagaaacggaaacatttgtagaaacgttcacccttcatgtgcagttacttgagcca
gactgcaacatcatcaaaatgcgctcccatgccctggaggtctctgagtattatggtctg
tccagagtcattgacaagaatgtcctcacttttgactatgacaggaagataaatctggat
tgcaccatttccatagcctctttggaaacccacttgcctgctcatggccagctcatcacc
agggaagtgcagcaagagcagcttcgtggagatcagctacagaccttcttccctggccct
aagcacagcctgggccaggagtgcagaaatgggagctgcatgctgggactgggagtcatt
aacaacacaaaagtgagctgtgaagaatttttgaggatgggcattcgatatcagcacctt
gatcctccctcacctgacatcgattatgttcctctgaggctggatctcacggaccgtaga
agcaaaactctgcacaagactgagtatgcatggctccctgttcagattaaaggtgctatt
cccaatcaaatacccaaagctaccccaatggccaagtacatcttggaagtagatcaattt
attttaacacccattacaaccataatcattgatgctgaagacaatgaaactccaaagtcc
cttcttgtattcaacattaccaaaccacctccacggggcttcatcactcatctatctgac
catacaaaagctgttggctccttcacatggaaagatctcaatgacatgcttattgcctat
cagcctccaaatatcagccacacagaaaggaggaattacgaggtggagtttcaggttcat
gacttctactttgaaaggagtttacctatcactgtgcagctttctatcagaacaacagac
acaaacgctcctcgggtttcatggaacacaggcctcagcctcctggaagggcaatcccga
ccgatcacatggcaacacttccaaattgtagacaataatagcatccaaaatgttcgcttg
attacagttgacggcttgcagcatgggcagctcacagtgagaggagggaaaggattcatg
ttcacagtctctgacattcaggctggagttgttcgctaccatcatgatgacagtgattct
actaaggactttgtggtatttaggatttttgatggccttcacagtattcgccataagttt
ccaatcaatatcctccctagagatgacagccctccatttcttatcagcaatgtggtcatt
gaagttcatgagggacagatggtcctgattcagggctccatgcttcatgcttctgacatt
gattccagtgatgactacatactgttcaatattaccaagccaccacaggctggagaaatc
atgaagaaaccaggaccaaacttgataggctattctgtcaacagttttcttcaaagagat
ttatttaatggaataatttattatcatcatttgggaggagaagtatttgaagattccctt
gagtttgtgttgtgtgatagccatgaccctcccaatctctcagagccacaggtgatgata
gtgcacattatccctgtggatgatcagctacccagagaagccccaggagtgactcgtcac
ctggttgttaaggagactgatattgctcatctaactaagaaacatctccactttatagat
gtggaagagcaagataggcaactcacatacaccataaccactcccccttttttctcttgc
atgcatggacactcagatgctgggaagctgtttatggtggacaacatccccaagctggcc
aaggatcctgctgctcttcctctgaagtcatttactcagcaagctgtcaactatatgaaa
gttgcctacatgccaccactgcaggatattgggcctgaacctcagcaagtccagtttatt
ttttctgttagcaatcagcatggtggcactttgtatgggatctgcttcaatattacaatt
cttcctgtggacaaccaatctccagaggtttttacaagccatttgagagtggaagagggt
ggcctgaaccctgtgacagaaggacatattctcatttctgatgtggacactagagaggag
caactcttcctcctcctgcagcaacagcctcagcatggggtggtggagctggatggcatt
ccaatgaatgaaggtgacaggctttcttgtgaagaccttcgtaacctggcagtcaggtat
cagcatgacggctctgagactctcagtgatgaagttctctttgcagccacagatggcatc
cactttgtagagttcatcctgcaggtcaaggtggtgcctgtgaatgacgagccacctatc
atgcgaacaggccttgctcctgttctctactgcctagagggtgaagaagtggtcctctcc
tccaagtatatttatgccacagacacagacagtgatgacctgaaactgatgtttctgctg
gctcaccagccctaccatggggtagtgagaaaagctggcattgctgtggatcgcttctcc
caagctgatgtgatctctggtttagtgacatataagcacactagtggggagattggccta
gacccttccattgagatcttaaccttcattgtttctgatggtgaggctggcctagatgcg
aaggactgctgttatgatggacctctttcttctccaactccgcttcatgttccatttcca
gtatatgaccttaacatcactgtacttcctgtggacaaccagcctccatcaatcacttct
ggtgcaaggtttgtggtggaggagggctcctcagcagtccttaccatcaaccatttgttt
gccaccgatgctgacactactgcagatgacttagagtttgtcttggtttctcctccccag
tttggttaccttgaaaatatactgccttctccaggttttgagaaaagtaacattggtata
agtatagcttcatttcagctgaagcacctgaaatccctgaacataaactatgtacaagcc
aggcacctgcgaatggagccaacagaagaccactttgtactttatgtcactgatgggctg
catcgctcagctgagactccattttttgtgctgatcaacccaaccaatgatgaagtccca
gaattcatagcaaggaatattaccgttcaagagggggagatgaaagagctggatctgtct
gtaatcaatgcagttgatctggatgttcctcaagaccatttgatatttgcagttgtgcaa
aggccttcatatgggtttcttattaatggaattcatggcaatgatgttctacaccataaa
caattaattaaccatgaccatcgcatccatgggtaccttgttcacaacttttccttggag
gtactgaagaatggaatgaagctgatgtatgtgcatgacaattcggaaaacctctctgac
agctttaaaatccagctatcggatgggaaacataaagtcctcagaaccatttcagtaaaa
gtcatcccagttaacgatgaaaaaccagtactgagcaagaaggatgatatagaggtgaac
atgggtgaaactcaaataatttctagtgctgttctgtcagcagaagataaagataccacc
agggagaaaatttactacttatttgaaagacttccagaaaatggtcagcttcagctcaag
gtaggccaaggctgggtgactctccagactggaatgaagtgcactcaggaagaactggat
gcaaaccttgtgagatatgtccatacaggagctataggatccaagaacccagacagtttc
acattttatctgtgggatgggtacaacagatctccagctacagacttctacataaatatc
aagggcatggaaaagggagatattgatgttttcataaaacctcttagagtgacaaaacag
gatcgggtctacattacaactgatgtcctccttgcactggatggtactgacaagccagag
gagctcctttatgtgataacctcccctcctcagcacggacaaatagagtacatcagctat
cctggcatacctattactagcttcagtcaaatggatgtagcaagacagatagtctgctat
gttcacaacacaaagtcagttgtttctgaagatacattcagattcatcatcagcaatgga
ctgaggactaagcatgggacattcatgatctccttggaggcagtcgaccaagctttgccc
acactatttaggaacatggggttaagattagtggaaggtgctatggcactcctttctcct
gatgtcctacagctttcagacccagacactgccaaagaaaaccttaccttcctcctggct
cagcttcccaaatatggtcatctctattatcgtggggctgtgttaatgaagtacaatttc
acccagcaagatgtggacaatggggatgttgcatacaagcatcaaggcggggattcccag
attgacaaatttacatttactgcaacggatagaaccaatcaaggcttcatcgtgaatggg
agggtgcagagcgaaccagtgtcattcactattcaggtggatcgcttggacaaaacggca
ccaaaaattattcgtctccattgtttttctgatgtggagctgctgaagaatgacaaatat
ggaatctatattactgccaggtctctgaaggcttctgatcctaatacagaagatgacaaa
ataatttttaagattttacgaggtcctcattatggctacctggaaaatataacaacaggt
gcacttattcaggaaggttttagccagaaggatttaaacagcaaagtcatactttatgtc
atcaatccattgcgggaggtgaattcagacaacgtggagtttcaagtcacagatatgagt
ggaaactctgcagtacctcaaaggttggagctacggtggtctcggattgaaatgcaacag
actgaatatgaagtatgtgagagcgtaggagtggtgtcactgaaaatcaccagggcagga
cacactgcagagtctgcctttattgctgtaaaggtcaatgaaatatctgctacgctggga
aaagactttacagtaactccctccaagcttgttcagtttgatccaggaatgtcaaccaag
acgtggaatatagcaattacctatgacagattagaggaagatgatgaagtctttgaagtg
gttctgaactcccctgtgaatgctgttcttggcacccggacaaaagctgtcgtgaaaatt
ttggactcaaaaggaggtcagtgcagctattcccattctgctggccaaaggaagcatgac
ttctgggggagaggcacatggcttccagtttcctcaagctcctcatcaccttctaggcct
ggcaaagctcccttggaagggatcccaccacctcctttcaaagggatgagacagcatgga
gggaacccacaacaggagcaaagctcggcgaatcagtcaaggaccgtactgagagtgact
ggaaatggcagaatagttcatccttcatctgtatttaggaatggaactgatgtggtttac
aaataccatggaatggtatcactcaaaatagaggatgacacctcatcagctaaagcaaac
aagaagactcaagtgtctgtaattgaccaagcacaaacacagataaatgtcatctcctct
aggaaaacagaaattccacaagctgataaggcagcactagcatctgaaccaagctcaaga
catcaggacttctactctttcctaaaggtctgtacaccagacttaaaagggctattgcat
tatgaagaaagcactcaaaagttatttcgatgtgatgggataacatggaaagaggcaagc
acaaagaaatgtccctccggatggagtcatcacaggggcagctgctacttcctggtagtg
aatcacaaggtcacctggaacgctgctgcacgggcttgcagagaacaataccaggggagt
ctagcaagtgtggctaatgaacaacacatgcagtggctgtgggacttcagcgggaggaag
cccttttggataggcctaagtgaccaagtcaatcctggacattgggagtggaatggagga
gaagctgtaacctacataaactggagaagaggctcctaccactttccaaagagagaaaga
aattgtgtattggtgcagaagcgaggaaaatggcaagcaactgactgctggaaggtcaaa
cgaagccgctacatatgttcaagaaagctgtaa
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integrated database retrieval system
