Cuculus canorus (common cuckoo): 104055243
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Entry
104055243 CDS
T08597
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104055243 (FREM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104055243
NCBI-ProteinID:
XP_009554645
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
MKLLRRSCLFPLLAGVLRVVCSSFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEVSEYYGLSRVIDKNVLTFDYDRKINLDCTISIASLETH
LPAHGQLITREVQQEQLRGDQLQTFFPGPKHSLGQECRNGSCMLGLGVINNTKVSCEEFL
RMGIRYQHLDPPSPDIDYVPLRLDLTDRRSKTLHKTEYAWLPVQIKGAIPNQIPKATPMA
KYILEVDQFILTPITTIIIDAEDNETPKSLLVFNITKPPPRGFITHLSDHTKAVGSFTWK
DLNDMLIAYQPPNISHTERRNYEVEFQVHDFYFERSLPITVQLSIRTTDTNAPRVSWNTG
LSLLEGQSRPITWQHFQIVDNNSIQNVRLITVDGLQHGQLTVRGGKGFMFTVSDIQAGVV
RYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPRDDSPPFLISNVVIEVHEGQMVLIQ
GSMLHASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYSVNSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMIVHIIPVDDQLPREAPGVTRHLVVKETDIAHL
TKKHLHFIDVEEQDRQLTYTITTPPFFSCAHGHSDAGKLFMVDNIPKLAKDPAALPLKSF
TQQAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQSPEVF
TSHLRVEEGGLNPVTEGHILISDVDTREEQLFLLLQQQPQHGVVELDGIPMNEGDRLSCE
DLRNLAVRYQHDGSETLSDEVLFAATDGIHFVEFILQVKVVPVNDEPPIMRTGLAPVLYC
LEGEEVVLSSKYIYATDTDSDDLKLMFLLAHQPYHGVVRKAGIAVDRFSQADVISGLVTY
KHTSGEIGLDPSIEILTFIISDGEAGLDAKDCCYDGPLSSPTPLHVPFPVYDLNITVLPV
DNQPPSITSGARFVVEEGSSAVLTINHLFATDADTTADDLEFVLVSPPQFGYLENILPSP
GFEKSNIGISIASFQLKHLKSLNINYVQARHLRMEPTEDHFVLYVTDGLHRSAETPFFVL
INPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPQDHLIFAVVQRPSYGFLINGI
HGNDVLHHKQLINHDHRIHGYLVHNFSLEVLKNGMKLMYVHDNSENLSDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKDDIEVNMGETQIISSAVLSAEDKDTTREKIYYLFERL
PENGQLQLKVGQGWVTLQTGMKCTQEELDANLVRYVHTGAIGSKNPDSFTFYLWDGYNRS
PATDFYINIKGMEKGDIDVFIKPLRVTKQDRVYITTDVLLALDGTDKPEELLYVITSPPQ
HGQIEYISYPGIPITSFSQMDVARQIVCYVHNTKSVVSEDTFRFIISNGLRTKHGTFMIS
LEAVDQALPTLFRNMGLRLVEGAMALLSPDVLQLSDPDTAKENLTFLLAQLPKYGHLYYR
GAVLMKYNFTQQDVDNGDVAYKHQGGDSQIDKLTFTATDRTNQGFIVNGRVQSEPVSFTI
QVDRLDKTAPKIIRLHCFSDVELLKNDKYGIYITARSLKASDPNTEDDKIIFKILRGPHY
GYLENITTGALIQEGFSQKDLNSKVILYVINPLREVNSDNVEFQVTDMSGNSAVPQRLEL
RWSRIEMQQTEYEVCESVGVVSLKITRAGHTAESAFIAVKVNEISATLGKDFTVTPSKLV
QFDPGMSTKTWNIAITYDRLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYS
HSAGQRKHDFWGRGTWLPVSSSSSSPSRPGKAPLEGIPPPPFKGMRQHGGNPQQEQSSAN
QSRTVLRVTGNGRIVHPSSVFRNGTDVVYKYHGMVSLKIEDDTSSAKANKKTQVSVIDQA
QTQINVISSRKTEIPQADKAALASEPSSRHQDFYSFLKVCTPDLKGLLHYEESTQKLFRC
DGITWEASTKKCPSGWSHHRGSCYFLVVNHKVTWNAAARACREQYQGSLASVANEQHMQW
LWDFSGRKPFWIGLSDQVNPGHWEWNGGEAVTYINWRRGSYHFPKRERNCVLVQKRGKWQ
ATDCWKVKRSRYICSRKL
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctcaggagaagctgtttgtttccactgctagctggtgtactaagagttgtc
tgctcctcctttattagtgtcaaccttggtgtgaaagtgatgaagggacagtctgtcttt
ctgtcagaagatgacctcaagttttccatccccagagagaaggatgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagggtcgggaaactaactcctcaggtttttgac
tgtcacttccttcctaatgaagtcaagtacacccacaatggctgtcctattttagacgaa
gacacggtcatgcttaggctgtacaggtttacagaaacggaaacatttgtagaaacgttc
acccttcatgtgcagttacttgagccagactgcaacatcatcaaaatgcgctcccatgcc
ctggaggtctctgagtattatggtctgtccagagtcattgacaagaatgtcctcactttt
gactatgacaggaagataaatctggattgcaccatttccatagcctctttggaaacccac
ttgcctgctcatggccagctcatcaccagggaagtgcagcaagagcagcttcgtggagat
cagctacagaccttcttccctggccctaagcacagcctgggccaggagtgcagaaatggg
agctgcatgctgggactgggagtcattaacaacacaaaagtgagctgtgaagaatttttg
aggatgggcattcgatatcagcaccttgatcctccctcacctgacatcgattatgttcct
ctgaggctggatctcacggaccgtagaagcaaaactctgcacaagactgagtatgcatgg
ctccctgttcagattaaaggtgctattcccaatcaaatacccaaagctaccccaatggcc
aagtacatcttggaagtagatcaatttattttaacacccattacaaccataatcattgat
gctgaagacaatgaaactccaaagtcccttcttgtattcaacattaccaaaccacctcca
cggggcttcatcactcatctatctgaccatacaaaagctgttggctccttcacatggaaa
gatctcaatgacatgcttattgcctatcagcctccaaatatcagccacacagaaaggagg
aattacgaggtggagtttcaggttcatgacttctactttgaaaggagtttacctatcact
gtgcagctttctatcagaacaacagacacaaacgctcctcgggtttcatggaacacaggc
cttagcctcctggaagggcaatcccgaccgatcacatggcaacacttccaaattgtagac
aataatagcatccaaaatgttcgcttgattacagttgacggcttgcagcatgggcagctc
acagtgagaggagggaaaggattcatgttcacagtctctgacattcaggctggagttgtt
cgctaccatcatgatgacagtgattctactaaggactttgtggtatttaggatttttgat
ggccttcacagtattcgccataagtttccaatcaatatcctccctagagatgacagccct
ccatttcttatcagcaatgtggtcattgaagttcatgagggacagatggtcctgattcag
ggctccatgcttcatgcttctgacatggattccagtgatgactacatactgttcaatatt
accaagccaccacaggctggagaaatcatgaagaaaccaggaccaaacttgataggctat
tctgtcaacagttttcttcagagagatttatttaatggaataatttattatcatcatttg
ggaggagaagtatttgaagattcccttgagtttgtgttgtgtgatagccatgaccctccc
aatctctcagagccacaggtgatgatagtgcacattatccctgtggatgatcagctgccc
agagaagccccaggagtgactcgtcacctggttgttaaggagactgatattgctcatcta
actaagaaacatctccactttatagatgtggaagagcaagataggcaactcacatacacc
ataaccactcccccttttttctcttgcgcgcatggacactcagatgccgggaagctgttt
atggtggacaacatccccaagctggccaaggatcctgctgctcttcctctgaagtcattt
actcagcaagctgtcaactatatgaaagttgcctacatgccaccactgcaggatattggg
cctgaacctcagcaagtccagtttattttttctgttagcaatcagcatggtggcactttg
tatgggatctgcttcaatattacaattcttcctgtggacaaccaatctccagaggttttt
acaagccatttgagagtggaagagggtggcctgaaccctgtgacagaaggacatattctc
atttctgatgtggacactagagaggagcaactcttcctcctcctgcagcaacagcctcag
catggggtggtggagctggatggcattccaatgaatgaaggtgacaggctttcttgtgaa
gaccttcgtaacctggcagtcaggtatcagcatgacggctctgagactctcagtgatgaa
gttctctttgcagccacagatggcatccactttgtagagttcatcctgcaggtcaaggtg
gtgcctgtgaatgacgagccacctatcatgcgaacaggccttgctcctgttctctactgc
ctagagggtgaagaagtggtcctctcctccaagtatatttatgccacagacacagacagt
gatgacctgaaactgatgtttctgctggctcaccagccctaccatggggtagtgagaaaa
gctggcattgctgtggatcgcttctcccaagctgatgtgatctctggtttagtgacatat
aagcacactagtggggagattggcctagacccttccattgagatcttaaccttcattatt
tctgatggtgaggctggcctagatgcgaaggactgctgttacgatggacctctttcttct
ccaactccgcttcatgttccatttccagtatatgaccttaacatcactgtacttcctgtg
gacaaccagcctccatcaatcacttctggtgcaaggtttgtggtggaggagggctcctca
gcagtccttaccatcaaccatttgtttgccaccgatgctgacactactgcagatgactta
gagtttgtcttggtttctcctccccagtttggttaccttgaaaatatactgccttctcca
ggttttgagaaaagtaacattggtataagtatagcttcatttcagctgaagcacctgaaa
tccctgaacataaactatgtacaagccaggcacctgcgaatggagccaacagaagaccac
tttgtactttatgtcactgatgggctgcatcgctcagctgagactccattttttgtgctg
atcaacccaaccaatgatgaagtcccagaattcatagcaaggaatattaccgttcaagag
ggggagatgaaagagctggatctgtctgtaatcaatgcagttgatctggatgttcctcaa
gaccatttgatatttgcagttgtgcaaaggccttcatatgggtttcttattaatggaatt
catggcaatgatgttctacaccataaacaattaattaaccatgaccatcgcatccatggg
taccttgttcacaacttttccttggaggtactgaagaatggaatgaagctgatgtatgtg
catgacaattcggaaaacctctctgacagctttaaaatccagctatcggatgggaaacat
aaagtcctcagaaccatttcagtaaaagtcatcccagttaacgatgaaaaaccagtactg
agcaagaaggatgatatagaggtgaacatgggtgaaactcaaataatttctagtgctgtt
ctgtcagcagaagataaagataccaccagggagaaaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggccaaggctgggtgactctccagactgga
atgaagtgcactcaggaagaactggatgcaaaccttgtgagatatgtccatacaggagct
ataggatccaagaacccagacagtttcacattttatctgtgggatgggtacaacagatct
ccagctacagacttctacataaatatcaagggcatggaaaagggagatattgatgttttc
ataaaacctcttagagtgacaaaacaggatcgggtctacattacaactgatgtcctcctt
gcactggatggtactgacaagccagaggagctcctttatgtgataacctcccctcctcag
cacggacaaatagagtacatcagctatcctggcatacctattactagcttcagtcaaatg
gatgtagcaagacagatagtctgctatgttcacaacacaaagtcagttgtttctgaagat
acattcagattcatcatcagcaatggactgaggactaagcatgggacattcatgatctcc
ttggaggcagtcgaccaagctttgcccacactatttaggaacatggggttaagattagtg
gaaggtgctatggcactcctttctcctgatgtcctacagctttcagacccagacactgcc
aaagaaaaccttaccttcctcctggctcagcttcccaaatatggtcatctctattatcgt
ggggctgtgttaatgaagtacaatttcacccagcaagatgtggacaatggggatgttgca
tacaagcatcaaggcggggattcccagattgacaaattaacatttactgcaacggataga
accaatcaaggcttcatcgtgaatgggagggtgcagagcgaaccagtgtcattcactatt
caggtggatcgcttggacaaaacggcaccaaaaattattcgtctccattgtttttctgat
gtggagctgctgaagaatgacaaatatggaatctatattactgccaggtctctgaaggct
tctgatcctaatacagaagatgacaaaataatttttaagattttacgaggtcctcattat
ggctacctggaaaatataacaacaggtgcacttattcaggaaggttttagccagaaggat
ttaaacagcaaagtcatactttatgtcatcaatccattgcgggaggtgaattcagacaac
gtggagtttcaagtcacagatatgagtggaaactctgcagtacctcaaaggttggagcta
cggtggtctcggattgaaatgcaacagactgaatatgaagtatgtgagagcgtaggagtg
gtgtcactgaaaatcaccagggcaggacacactgcagagtctgcctttattgctgtaaag
gtcaatgaaatatctgctacgctgggaaaagactttacagtaactccctccaagcttgtt
cagtttgatccaggaatgtcaaccaagacgtggaatatagcaattacctatgacagatta
gaggaagatgatgaagtctttgaagtggttctgaactcccctgtgaatgctgttcttggc
acccggacaaaagctgtcgtgaaaattttggactcaaaaggaggtcagtgcagctattcc
cattctgctggccaaaggaagcatgacttctgggggagaggcacatggcttccagtttcc
tcaagctcctcatcaccttctaggcctggcaaagctcccttggaagggatcccaccacct
cctttcaaagggatgagacagcatggagggaacccacaacaggagcaaagctcggcgaat
cagtcaaggaccgtactgagagtgactggaaatggcagaatagttcatccttcatctgta
tttaggaatggaactgatgtggtttacaaataccatggaatggtatcactcaaaatagag
gatgacacctcatcagctaaagcaaacaagaagactcaagtgtctgtaattgaccaagca
caaacacagataaatgtcatctcctctaggaaaacagaaattccacaagctgataaggca
gcactagcatctgaaccaagctcaagacatcaggacttctactctttcctaaaggtctgt
acaccagacttaaaagggctattgcattatgaagaaagcactcaaaagttatttcgatgt
gatgggataacatgggaggcaagcacaaagaaatgtccctccggatggagtcatcacagg
ggcagctgctacttcctggtagtgaatcacaaggtcacctggaacgctgctgcacgggct
tgcagagaacaataccaggggagtctagcaagtgtggctaatgaacaacacatgcagtgg
ctgtgggacttcagcgggaggaagcccttttggataggcctaagtgaccaagtcaatcct
ggacattgggagtggaatggaggagaagctgtaacctacataaactggagaagaggctcc
taccactttccaaagagagaaagaaattgtgtattggtgcagaagcgaggaaaatggcaa
gcaactgactgctggaaggtcaaacgaagccgctacatatgttcaagaaagctgtaa
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integrated database retrieval system
