Cuculus canorus (common cuckoo): 104056331
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Entry
104056331 CDS
T08597
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104056331 (RBFOX1)
Spliceosome [BR:
cuca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104056331 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
104056331
NCBI-ProteinID:
XP_009555874
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MLSSQGVLLHPYGVPMILPAAPYFAGLVQGNQEATAPPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTDDAAQTDG
QQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYS
PEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVY
NTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSYGRVYAAD
PYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtctcaaggagttttgctacatccatatggagtgccaatgattctgccggca
gcaccatacttcgctggacttgttcagggtaatcaggaagctacagcacctcctgacaca
atggcacagccttatgcctcagcccagtttgctccacctcagaacggtatccctgcagaa
tacacagccccacatcctcatccagctccagactatacaggccaaaccactgttccagag
cacacgttaaacatgtaccctcctgctcagacacactctgaacagagtgcagctgacaca
aatgcacaaactgtctccggcacagccacacagacagatgatgcagcacagactgatggc
cagcaacagacacaatcttctgaaaacacagaaaacaaatcacagccaaaacggcttcac
gtctcaaatataccattcagattccgggatccagatcttagacaaatgtttggtcaattt
ggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttc
gtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtg
gtagagggccgtaaaatcgaggtaaataatgcaacagcacgtgtaatgacaaataaaaag
accgtcaacccttacacgaatggctggaaattaaatccagttgttggtgcagtttatagt
ccagaattctatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtg
tacagtgcccccagttcactagtatacacatccacaatgccaggatttccctaccctgct
gcaactgcagctgctgcgtacagaggtgcacatctaagaggccgaggtcgcacagtctac
aacacgtttcgtgcagcagccccccctcctccaattccagcctacggcggtgttgtatac
caggatggattttatggtgcagacatttatggtggttatgctgcctaccggtatgcccag
cctgccactgccactgcagctgcctacagtgacagttacggacgagtttatgctgcagac
ccctaccaccacacacttgctccagcagccacctacggcgttggtgccgtgaatgctttt
gcacccttgactgatgccaagactaggagccatgctgatgatgtcggtctcgttctttct
tcattacaggctagtatataccgagggggatacagccgttttgctccatactaa
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