Cuculus canorus (common cuckoo): 104057022
Help
Entry
104057022 CDS
T08597
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104057022
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104057022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Lustrin_cystein
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
104057022
NCBI-ProteinID:
XP_009556640
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MAEFLLPGTNNFRKFTHESLAAIEKRIAAKRNCRRNTVDLKPEEKPRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYKDHKVFIVLNKQKTIFRFTATRALWILSPFHPIRRTAIK
ILVHSLFTLFIMCTILTNCAFMAMTESASPSWNKFTFTGIYTFESLIKILARGFCLNEFT
FLRDPWNWLDFTVILMAYVGAFSNLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSV
KKLANVMILTVFCLSVFALIGLQLFKGNLRRKCVRNSTEFNEISDYIKKKYVGAFSNLGS
VSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVFCLSVFALIGLQLFKG
NLRRKCVRNSTEFNEISDYIKKKWDSYEMFANYSAYFAKKEGTSEVLLCGPGAGTCPPDY
TCQQIGPNPDYGFTSFDTFGWAFLSLFRLMTQDYWERLYQQTLRASGKVYILFFMLVIFL
GSFYLVNLILAVVTMAYEDQNKATIAETEAKERKFREAMELLQKEQESLGIKGIDILSIN
SFEASSLSPKEIKGRRNRIKRNKSLGTEDNEEEQFPKSQSTDSQRKLPAVNDESSMMHLP
PHLSVEYFNEALQRQRAASAVSIITSVLEELEESQRRCPPCLKDLALKYLIWDCCPLWLR
IKKKVAAFIKDPFIDLTITVCIVINTLFMALEHNNMTDSFKFMLNVGNLVFTGIFTAEMI
LKIIALDPYYYFQQPWNIFDSVIVTLSLIELSLPKYKGKKERRRGGTLSVLRSFRLLRVF
KLAKSWPTLNTLIKIIGNSLGALSNLTLVLAIIIFIFAIVGMQLFGRSYADNSHKINNGG
KPRWHMMDFFHSFLVVFRILCGEWIETMWDCMVVAEKPLCLLVFLLVMVIGNLVVLNLFI
ALLLNSFSTDCLQTAEDDRELNNLRIAFARIHKGFQIVKRVMWETCCGKLRHIKKAHRKK
IKLTAQNPLGFKQEEIQNCKENYNNEWVEKNGNKCLGLEDYITNPNVFVCVPIAEAENTS
EGFEDDDKLSTFTDTEHSGQFDSVSSSEGSTVDLTNPEDLLRQIPELAEDFKTPEKCFPE
GCVRYFHCYTGSAIKFGGETWWNLRKTCYQIVEHSWFESFIIFMILLSSGALAFEDIHIN
ERKTIKNILAFLDKLFTFIFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLINLLGSS
FGPMKSLRTLRALRPLRALSRFEVLRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKFGKCVNLTEENSQLNDSINDITDCKMHNNTGKIFWVNVKVNFDNVGSGYLALLQVA
TFKGWMDIMYAAVDSREKNEQPQMEHSLFMYLYFVNFIIFGSFFTLNLFVGVIIDNFNQQ
KKKLGGEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRYQAFLFDIVTCQAFDVVIMI
LICLNMITMMVETYEQSEMKTNILNKINILFVSIFTAECVLKLTALRQYYFSNAWNIFDL
VVVIMSLIALLLSGIGKAFEHFLPPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSI
PALFNIGLLLFLVMFIYAIFGMANFAYVKMEGGIDDMFNFQTFANSMLCLFQITTSAGWD
GLLSPILNTGPPYCDPNINGTIGECGKPAIGIIYFVSYIIISFLIVVNMYIAVILENFNV
ATEESTEPLGEDDFDIFYEIWEKFDPEATQFITFSALSDFADALAEPLRVPKPNKVELTA
MDLPMVSGDRIHCLDILFAFTKRVLGDSGELDTLKVQMEEKFMAANPSKKSYEPISTTLR
HRQEEASATVIQRAYRNHLLLRSMKQASYLYHHRTCSGDTLGCAAPEKEGLIVSVMDENY
GRSPDKSETLSSASFPPSYDSVTRASSGNLVVENGEITGNKQSPDTE
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcttacttcctggtaccaacaacttccgtaagttcactcatgaatccttg
gctgctattgaaaaaagaattgctgccaagaggaattgtcgaagaaatactgtagacctg
aaacctgaggagaaaccacgtcctcaacttgacttaaaagctttccagaagttaccagct
ctctatggaaatcctcctccagagctcattggagaaccactggaggatctcgacccatac
tacaaagatcataaggttttcatagtgctaaacaaacagaaaactatcttcagatttact
gctacacgtgccttatggatcctcagtcccttccatcctatccgaagaacagcaattaaa
attttagtacattcattattcactttgtttatcatgtgcactattttaactaattgtgca
tttatggctatgactgagtctgcatctccttcatggaacaaatttactttcactggcatt
tacacttttgaatcattgataaaaatattggcaagaggattctgtctaaatgaattcact
ttccttcgagatccctggaactggttggatttcactgttatccttatggcatacgtggga
gcatttagtaacttggggagcgtgtctgtccttcggactttcagggttctgagagcttta
aaaaccatttcagtagtcccaggactcaagatcattgtaggggcacttatccagtctgtt
aaaaaacttgccaatgtgatgatcctgaccgttttctgcctgagtgtctttgcccttata
ggcctccagctttttaagggcaatttaagacgaaagtgtgtcagaaactctacagagttc
aatgaaatatctgactatattaaaaaaaaatacgtgggagcatttagtaacttggggagc
gtgtctgtccttcggactttcagggttctgagagctttaaaaaccatttcagtagtccca
ggactcaagatcattgtaggggcacttatccagtctgttaaaaaacttgccaatgtgatg
atcctgaccgttttctgcctgagtgtctttgcccttataggcctccagctttttaagggc
aatttaagacgaaagtgtgtcagaaactctacagagttcaatgaaatatctgactatatt
aaaaaaaagtgggattcctatgaaatgtttgctaattactcagcatactttgctaagaaa
gaaggcacctcagaagttttgctgtgtggtcctggtgctgggacctgccctccagactat
acatgccagcaaatcgggccaaatcctgattatggtttcactagttttgatacatttggc
tgggcttttctttccttattccgcctaatgacgcaggactactgggagcgtctgtaccag
cagaccctcagagcttctgggaaggtgtatatactcttcttcatgctggtcatctttctg
ggctcattttatctagtcaacttgattcttgctgtagtaacaatggcatatgaagaccag
aacaaggccaccatcgctgaaacagaggcaaaagaaaggaaatttcgggaagccatggaa
ttgttacagaaggagcaggagtcattgggtattaaaggaattgatatcctgtcaattaac
tccttcgaagcctcttctctgtctcccaaagaaatcaaaggacgaaggaataggataaag
agaaataagtccttggggacagaagataatgaagaagaacaattccccaaatcacagtcc
acagacagtcaacgaaagttgccagctgtaaatgatgagagcagcatgatgcatttgcct
cctcatctgtcagtggagtactttaacgaggcacttcagagacaaagggcagccagtgca
gtcagcataattaccagtgtcttggaggaacttgaagaatctcagcggagatgcccacca
tgcctgaaggatcttgctttaaagtatctaatttgggactgttgtccactttggttgaga
atcaagaaaaaagtggctgcttttataaaggatccttttattgatctcaccatcactgtt
tgcattgtgatcaatactttgttcatggcactggagcataataatatgacagatagtttt
aaattcatgcttaatgtaggcaatttggtttttacaggaatcttcactgcagaaatgatc
ttaaaaatcattgctttagatccttattactattttcagcagccatggaatatttttgac
agtgtaattgtcacattgagtttaattgaactgagtttacccaaatacaaaggcaagaaa
gaaagacgaagaggaggaaccctgtcagttttaagatccttcagactgttgagggtcttc
aaactggcgaagtcctggccaactttaaacacactaattaaaataattggtaactccctg
ggagcactgagtaatctgaccctcgtcctggcaatcatcatcttcatttttgctatagta
ggaatgcaactttttgggagaagctatgcagacaacagccataaaataaacaatggtggc
aagccacgctggcacatgatggactttttccactccttcctcgttgttttccgaattctg
tgtggcgaatggattgagactatgtgggactgcatggtggttgctgaaaaaccactgtgc
cttcttgtttttctgctagtcatggtaataggaaatttagtggttctcaaccttttcatt
gcgcttctgctgaattccttcagtactgactgtctccagacagcagaggatgacagagag
ttgaacaatcttcggatcgcctttgctcgaattcacaagggatttcagattgtgaaacgt
gttatgtgggaaacctgttgtgggaagctcaggcatataaagaaggctcacaggaagaaa
atcaaattgactgcacagaatccacttgggttcaagcaagaagaaatacaaaattgtaaa
gagaattacaataacgaatgggttgagaaaaatgggaacaaatgcttaggacttgaagat
tatattacaaatcccaatgtatttgtttgtgtccctattgctgaggcagagaataccagt
gagggttttgaagatgatgataagctgagcacatttacagacacagaacacagtggacag
tttgacagcgtcagctcttctgaaggcagcacagtggatctgacaaaccctgaagatctt
ttgaggcagattccagagcttgctgaagacttcaagactccagaaaaatgttttccagaa
ggttgtgttcgatactttcattgttatactggtagtgccataaagtttggaggagaaaca
tggtggaatctgagaaaaacctgctatcagattgttgaacactcctggtttgaatccttt
atcatattcatgattcttctgagcagtggagccctggcttttgaagacatccatataaac
gagaggaaaaccattaaaaatatcttggcatttcttgacaaactgttcactttcatcttt
gttctggagatgcttctaaaatgggtggcttatggcttcaagaagtatttcaccaatgcc
tggtgctggctggacttcctcatcgtagacgtctctttaataaacctattaggcagttca
tttggtccaatgaaatctcttaggactctccgagctctgagacccttaagagcattgtca
cgatttgaggtgttgagggtggtggtcaatgccctcgtgggagccatcccttccatcatg
aatgttctgctcgtctgcctcatcttctggctcatctttagcatcatgggagtaaacctc
tttgctgggaagtttggaaaatgtgtcaatctgacagaagaaaattcacaattaaatgat
tcaattaatgacataacagactgtaaaatgcataataacacaggaaaaatattctgggtc
aatgttaaagtcaattttgataacgttggctctggctacctggctcttcttcaggtggca
acatttaaaggttggatggacatcatgtatgcagcagtagattcacgagagaaaaatgag
cagccacaaatggagcacagtttatttatgtatctgtactttgtgaacttcatcatcttt
ggatccttctttaccctaaatctctttgttggtgttatcattgacaacttcaaccaacaa
aagaaaaagttaggaggggaagatatctttatgacagaagaacagaaaaaatattacaat
gcaatgaaaaagttgggatccaagaaacctcaaaaacccattccaagaccactgaacaga
taccaagcattcctttttgatattgtaacatgccaggcctttgatgttgtaatcatgatt
ctcatctgccttaacatgatcaccatgatggtggagacctatgagcaaagtgaaatgaag
actaacatccttaacaagatcaacatactcttcgtttccatctttactgcagaatgtgta
ctgaaattgacagctctgaggcaatattatttctcaaatgcctggaacatatttgattta
gttgttgtgattatgtcacttattgccttgctgctttctggcattggtaaagcatttgaa
catttcttaccgcctacactgttcagggtcattcgcttggctcggattggacgaatactg
cgactcatccgggctgccaaaggaattcgaactttgctttttgcattaatgatgtccata
cctgccctatttaacattggcctcttgctttttctggtcatgttcatttatgctattttt
ggcatggctaactttgcgtatgtgaagatggaaggtggcattgacgatatgttcaacttc
caaacctttgctaacagcatgctctgtctcttccaaatcaccacatcagctggctgggat
ggtcttctcagtcctattttaaacactgggccaccatactgtgatccaaacataaatggt
actataggtgaatgtggtaaacctgctataggtattatttattttgtaagttatatcatt
atatcatttctcattgttgtaaacatgtatatagcggttattctggagaacttcaatgtt
gctactgaggaaagtacagagccattaggagaagatgactttgacatcttttatgaaatc
tgggagaagtttgatcctgaggcaactcagtttataactttctctgcactttcagacttt
gcagatgctctggctgaacctttacgtgtaccaaaaccaaacaaagttgaactcacagca
atggaccttcctatggtcagtggagatagaatccactgcttggatatcttgtttgctttt
accaaacgagtgttaggagattctggggagctggatactcttaaagtacaaatggaggag
aagttcatggctgccaatccatcaaaaaaatcctatgagccaatctccactactctcaga
cacagacaagaggaagcttctgccactgttatccagcgcgcctataggaatcatttgctt
ctgcgctccatgaaacaggcttcctacctgtaccatcacagaacttgtagtggtgacact
cttggatgtgctgctccagaaaaagaagggcttatcgtatctgtgatggatgaaaactat
ggtaggagtcctgacaagtctgaaactctgtcctcagcatcctttcctccatcatatgac
agcgtcacaagagccagtagtggcaatcttgtggttgagaatggagaaattacaggtaac
aaacaatctccagacactgaatag
DBGET
integrated database retrieval system
