Cuculus canorus (common cuckoo): 104059359
Help
Entry
104059359 CDS
T08597
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104059359 (CHD6)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104059359 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
Helicase_C
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
104059359
NCBI-ProteinID:
XP_009559315
LinkDB
All DBs
Position
Unknown
AA seq
2722 aa
AA seq
DB search
MTEGGTGPPSFAALSRSPMSDAWECKVQDPFGSGEEQEEVPHQATATGGQCQCPEQEPNA
APPKRTSSQNGMQDSGGGGTGVKKKRKKKDLGEQEGGEKAAVEVKPKRRREPKEPKEPKK
AKEPKKPKEPKQREGTKKPRKPREPKTPKEPKDKKNGSESAPRARSRKSSKDTPVEKKKK
GKRKNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDD
DGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKETHPGGLAFEMEE
FYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV
DRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKH
TERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSI
TFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYR
DAQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLM
ALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKP
MMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINT
MMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIA
GGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLL
CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM
FDKASLKLGLDKAVLQDINRKGSTNGLQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEE
DIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAK
NEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAEC
FRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWD
LITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDS
YKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWW
NAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGTQDAAERG
SMEKEESSGEKLEGLPKQEDMVAAGVGEASEKRDEPAAAQDGSDSDRSCWPVSSALTARL
RRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDEVFRRASEMDSVNKEMQKRWTRREQAD
FYRTVSSFGVVYDQEKKIFDWTQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKE
DGPLDADIYVEPITEERAARTLYRIELLRKVREQVLKSPQLHERLKLCRPSLYLPVWWEC
GKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQNKRTGLPGPETLCCLYQTNS
KLYTSPLYSQVDQPLQGDEPLENESESQVKLETADTTMSQAGGSPPDSSCETFMSKVRDL
MSSNYDESSLPESLVCMMYDEKACNSEQSSLARDSPSCTDVGSSVAKLSEGKLEGDEDPS
SCDADTMRDGLHGGCDRMDGQNEEAEPSTPESNPSQSIPAELGEALQQKGDLSSPAAALP
EHSAMEGVVTMGLYSPSLHNYEIKVAPEQRFIDLLQEKGIEAKSGPSQSHSEEDEEEEED
DDNSEAAEEVVEGLSRPRSRACCDPEAHELGAEEQSSGLPTPENPCPEDMNSERGSVGLG
TPEGLGEPGPEGREDQGLDEESALQHSPGQAQSQAFGLPTALPGATGAEPPCAGAQAWDQ
GAEGQPSCREALHPEPQGMKQEECEKRDDGEKTSSNQSLDGPDKYLEEESKSSASVLPGE
IDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIISRIDNICHAILKGKWPSSSQQFETQS
LLATPAVASNAGSRSSFAESEAPDPSFNNGVLISQVQKEGFLTPAFAKDERKHRRPYEFE
VERDAKQRSLEHLAATHVHPPIVLNGWRDTAVDLSRASDGSQGNSSPFSLNTNMPKLGTM
NTLQGSLGMDLSGILQAGLIHPVTGQIVNGSIRRDDAAMRRRRGRRKNVEGMDLIFLKER
PLPTRLQDVQEDQLQPPQNSPVSDGPAAATSTSQPVPAAGSQAEKAVSNKSLLDWLRQQS
DYTLDVSGFGTNFSDKPKQRRQRCKDPSKLDISALTGEERVPVVHKGTGRRLGGATAPAL
KELPRWLDANLEYAVAADWADIVKLSGYLPESKFNRILDEPVLRDTGPRRRGRRPRSELI
KGPGIVADSPSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGEDV
KSTLSMLPMMLPGMATVPQMFGVGGLLNPPMATTCTATAPTSLTSTTKSGTASAEKATED
KQSSQEVKKETLSEEKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPG
IGMALPGIQQTRHSEAATLESQKRKRKKAKGELANPDPETVSPPEKKAANGQNCTEQTPP
LPAEKEQDGPAEEEREAARDTD
NT seq
8169 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaggtggcactgggccgccaagcttcgcagcgctgagccgctccccaatgtcg
gatgcctgggagtgcaaggtgcaggacccctttggcagcggtgaggagcaggaggaggtg
cctcaccaggcgacagccacgggcgggcagtgccagtgccccgagcaggagccgaatgca
gctccccccaagcggacaagctcccagaacgggatgcaggacagcgggggtgggggcacg
ggtgtgaagaagaaacggaagaaaaaggatctgggagagcaggaagggggagaaaaagca
gcagtggaggtgaaaccaaagaggaggagagaacctaaagaaccaaaagagcctaaaaag
gctaaagagcccaagaagccgaaggagcccaagcagagggaggggaccaagaagccccga
aaacctcgggaacccaaaacccccaaggagcctaaagacaagaagaacggctctgagtct
gcacccagagcgaggtccaggaagagcagcaaggacacccctgtggagaagaagaagaaa
gggaagaggaaaaatgagataccagtggacagtttggatttggatcaggatctcctgagc
ccatccgtacagagcccagaggagtctgcagagtcggccgacagccagaaacgccgctcg
ggacggcaggtgaagaggaggaagtacaacgaggacctggatttcaaggtggtggatgat
gatggcgagacaatagctgtactgggagctgggcgaacctctgcactctccgcctctact
ctggcgtggcaggcagaggaacctcctgaggatgatgccaacatcattgagaagatcctg
gcctccaggatggttcagaaggagactcatcccggaggcctggcgtttgagatggaggag
ttttacgtcaagtacaggaacttctcctacctccactgtaagtgggcaacccttgaggag
ctggagaaggaccccaggatctcccagaagataaagcgcttccgcaacaagcaggctcag
atgaagcacatcttcacagagcctgatgaggatttgttcaaccccgactatgtagaagta
gatcgaattctggaggtggctcacacaaaggaccctgacaccggggaggaggtgacccac
tacctggtgaagtggtgctcgcttccctacgaggagagcacctgggagctggaggaggat
gttgacccagggaagattaaagagtttgaagccctccagatccctccagaaatcaagcac
acggagcgcccggcatccgagtcctggcagaaactggagaagtcccgggagtataagaac
agcaaccagttgcgggagtatcagctggagggaatgaactggctgctctttaactggtat
aacaggaagaactgcatcctggctgatgagatggggctggggaagacaatccagtcaatc
accttcctctcagaaatattcctgatgggcatccacggccccttcctcatcatcgcacct
ctctccaccatcaccaactgggagagggagttccgcacttggacagagatgaatgccatc
gtgtaccacggcagccagatcagccggcagatgatccagcagtacgaaatggtgtacagg
gacgcacagggtaaccctctccctgggatcttcaagttccaggtggttatcaccaccttt
gagatgattcttgctgactgcccagagctgaagaagatccagtggcgctgcgtggtcatt
gatgaggcgcatcgcctgaagaacaggaactgcaaactcctggaggggctgaagctcatg
gccttggagcacaaggtgctgctgacagggactcccctgcagaactcggtggaggagctc
ttcagcctcctgaacttcctggagccacagcagttcccctcagagacagccttcctggaa
gagtttggagacctgaagacagaggagcaggtgaagaagctgcagtccatcctaaagccc
atgatgctgcgacggctgaaggatgatgtagagaagaatctggcacccaagcaggagacc
atcattgaggtggagctgaccaatatccaaaagaaatactaccgggccatcctggaaaag
aacttctctttcctctccaagggtgccaaccagcacaatatgcccaacctcatcaacacc
atgatggagctgcggaagtgctgcaatcacccgtatctcattaatggggcagaggagaag
attctggaagacttccgtaaaacacacagcccagaggcaccggacttccagctgcaggcg
atgatccaggcagccgggaagctggtgctcattgataagctgcttcccaagctgattgcc
ggtggacacaaggtgctcgtcttctcccagatggtgcgctgcctcgacatcctggaagac
tatctcattcagaggcggtacacctacgagcgcattgatgggcgagtgcgtgggaacctg
cgccaagctgccattgaccgcttctgcaagcctgactcggatcgcttcgtatttctcttg
tgcacgcgggcaggtgggctgggcatcaacctcaccgctgcggacacctgcatcatcttc
gattctgactggaacccacagaacgacctccaggctcaagctcgctgccaccggatcggg
caaagcaaggcggtgaaggtctatcgcctcatcaccaggaactcctacgagcgggagatg
ttcgacaaagccagcctgaagctgggcctagataaggctgtgctgcaggacatcaaccgc
aagggcagcaccaatgggcttcagcagctctcaaagatggaggtggaggacctgctacgg
aagggtgcttatggagctctcatggatgaggaggacgaaggatcaaagttctgtgaggaa
gacattgatcagatcctccagcgcaggacacagaccatcacgatccagtcagaggggaag
ggctctacatttgccaaggccagcttcgtagcttcaggaaacagaaccgacatttccttg
gatgaccccaacttctggcaaaagtgggccaagatagcggagctcgataccgatgccaag
aacgaaaaggagagcctggtcattgacaggccccgcgtgcggaagcaaaccaaacactac
aactcctttgaagaggacgagctgatggagttctccgagctggacagtgactcggacgag
cgacccacacgctcacgacgcttcaatgagaagacacggcggtacctgcgggctgagtgc
ttccgcgtggagaagaacctgctcatatttggctggggacgctggaaagatatcctgacc
catgggcggttcaaatggcacctgaatgagaaggacatggagatgatttgtcgggccttg
ctggtctattgtgtcaaacactacaagggggatgagaagataaagagttttatctgggat
ctcatcacaccgacaaaggacggccagaaccaggctctgcagaatcactcaggcctgtca
gcgccggtgcccagagggaggaaggggaagaagacgaagaaccagatgctgcttcctgag
ataaagaacgcggactggcttgccacctgcaaccccgaggttgtcctccacgacgacagc
tacaagaagcacctcaagcagcactgcaacaaggtgctgctgcgggtgcgaatgctctac
tacctgaaggctgaagtgctgggggaggccgcggacaaagccttcgaggggacccctgcc
agggagctggacgtgctgctgccagacattgactacgtggagatcccggtggactggtgg
aacgctgaagctgataaatctctactcattggcgtcttcaagcacggttacgagcggtac
aatgccatgcgggcggacccggcgctctgctttctggagaaggtgggcatgccggacgag
aagctgctctccgcggagcagggcgtcagcgatggcactcaggatgctgctgaaaggggc
agcatggaaaaggaagagagcagtggagaaaagctggaggggctgccgaagcaggaggac
atggtggctgctggagtgggcgaagccagtgagaagcgggacgagccagcggcagcccag
gatggctccgactcagacagatcctgctggcctgtctcgtctgccctcacagccagactg
cggaggctcgtcaccgtctaccagcgctgcaaccgcaaagagctgcctccccgtgctgag
atgctggtgcccggtaaccatggatactggctgcaggacgaggtgttcaggagagcctct
gagatggactcagtgaacaaagaaatgcagaaaaggtggaccaggagagagcaggcagat
ttctaccgcactgtctcctcctttggggttgtctatgaccaggagaaaaagatctttgac
tggacccagttccgagccatctctcgactggagaagaagacagacgagagcctggagaag
tacttctacagcttcgtggccatgtgcaagaatgtctgtggtctcccgctgtggaaagag
gatggtcccctagacgctgacatctacgtggagcccatcacagaggaacgtgccgccaga
accctttaccgtattgagctcctgcgaaaagtgcgtgagcaggtgctcaagtctccacag
ctccacgagcggctcaagctctgccggccgagcctctacctgccggtttggtgggagtgt
ggcaaacacgatcgggacctgctgatcggcaccgccaaacatggcctgaatcgcacagac
tactacatcatgaatgacccccagctgtcctttttagatgcctacaggaactatgctcag
aataaaagaacggggctcccaggcccagaaacgctgtgctgcctttaccagactaactcc
aaactctacacttcccctctgtatagccaggtggaccaaccgctgcagggggatgaaccc
ctggagaatgaaagcgagagtcaggtcaagctagaaactgcagacaccaccatgtcacag
gctgggggcagccctccagactccagctgtgaaacattcatgtctaaagtccgggacctc
atgtccagtaactatgatgaaagctctctgccagagtcgttggtgtgcatgatgtatgac
gagaaggcctgtaacagcgagcagagctctctcgctcgagacagcccgagttgcacagat
gttgggagcagcgttgctaaactctctgagggcaagttagagggggatgaggacccatcc
agctgcgatgcggataccatgagggacggtttgcatgggggctgtgaccgaatggatggt
cagaatgaggaggctgagccttcaactcctgaaagcaacccctcacaaagcatcccagca
gagctcggcgaagccttgcagcagaagggagacctcagcagccctgcggcagcgctgcca
gagcacagtgccatggaaggggtcgtaaccatggggctttacagtcccagccttcataac
tatgaaataaaggttgctcctgagcagaggttcatcgatctgctgcaggaaaaaggaata
gaggcaaagtcgggaccaagtcagagccacagtgaggaggatgaggaggaagaagaggac
gatgataactctgaggcagcagaagaagttgtggaaggcttgagtcgtcccaggagcagg
gcttgttgtgatcctgaggctcatgaactaggggctgaggagcagagctctggcctcccc
acaccagagaacccttgcccagaagacatgaatagcgagagagggtccgtggggctgggg
acacccgaagggctgggggagcctgggccagagggcagggaggaccagggcctggatgag
gagagcgccctgcaacactcgccaggccaggcccagagccaggctttcggcctgcccaca
gcactgccaggggccacaggggcagagcccccctgtgctggggcacaggcctgggaccaa
ggggctgaggggcagccaagctgcagagaggccctgcaccccgagccccagggcatgaag
caagaagagtgtgagaagagagacgacggggagaaaaccagcagcaaccagagtctagat
ggtccagacaagtacttggaggaggagagcaagagttctgcttctgtcctgcctggggag
attgatgaccttcaggatgcccgggcgccaaccatagcccaactgctgcaggagaagaca
ctttactccttctctgagtggcctaaggaccgtgtcatcatcagccgcattgacaacatc
tgccatgccatcctgaagggcaagtggccttcctccagccagcagtttgagacacagagc
ctgctggccactccagcggtagccagcaatgccggcagcaggagcagctttgctgagtca
gaagcgcctgatcccagcttcaataacggggtgttaatctcacaggtacaaaaggaaggt
ttcctgacccctgcctttgcaaaggatgagcggaagcacaggaggccctacgaattcgag
gtagagagagatgccaagcagagaagcctggagcacctagcagcaacccacgtccatcca
cccattgtgctaaatggctggcgtgacacagcggtggacttgtccagagcctctgatggt
tcccaggggaactcttctcctttctccctcaacacaaacatgcccaaactagggaccatg
aacaccctccagggctccctgggcatggacttgtccggcatcctccaggcggggttgatc
catcctgtcacgggacagatcgtaaatggcagcatccgaagagatgatgctgccatgcgg
aggagacgaggcaggagaaaaaatgtagaagggatggacctcatcttcttgaaggagagg
cctcttccaaccaggctgcaggatgttcaggaagaccagctgcagcccccccagaacagt
cccgtctctgatgggccggctgctgctacctcaacttcacagccagtcccagctgcaggc
agccaagcagagaaggctgtctcgaataagagtctcctcgactggctccgtcagcagtcc
gactacacactcgacgtttctggctttggcacaaatttttcagacaagcccaagcagagg
aggcaacgctgcaaggaccccagcaaattggacattagcgcgctgacaggagaggagcga
gtgcctgtggtacataagggtaccggacggcggttagggggagccacagcaccagcattg
aaggaattgccaaggtggcttgatgcaaacttggagtatgctgttgcagctgactgggct
gacattgttaagctttcaggctacttaccggaaagcaaattcaatcgcatcctagacgag
cctgtgctccgcgacacagggccccgacggaggggcaggaggccccgcagcgaactcatt
aaaggccccggcattgtagcagattctccttctggaatgggaccattgttcatgaacgga
ctgattgctgggatggatctggtgggacttcagaacatgagaaacatgcaagggatccct
ctgactgggctggttgggtttcctgctggatttgcagcggtgcccgctggtgaggacgtg
aaaagtaccctgagcatgttgcccatgatgctgccaggcatggccaccgtcccacagatg
tttggcgttggaggacttctcaacccacccatggcaactacttgtactgcgactgctcca
acttcgttaacaagcacaacgaaaagtggtacagccagcgcagagaaagctactgaggat
aaacagagcagccaggaggtgaaaaaagaaactctctcggaagagaagcctggtcctagt
tcattttctaatcagacagaatctgcaataactaccagtagtcctgtagcttttaacccg
tttcttatcccagggatgtctcctggactgatctatccctcaatgttcctttcccctggc
atcggcatggcactgcccggcattcagcaaaccaggcactcggaggcagcgaccctggaa
agccagaagcggaagagaaagaaagcaaaaggggagttggcaaacccagacccagaaact
gtctcgccaccggaaaaaaaagctgcgaacggtcagaactgtacagagcaaaccccgcct
ttgccggcagagaaggagcaggatggaccagcagaggaggagcgtgaagcggctcgcgat
actgattag
DBGET
integrated database retrieval system
