Cuculus canorus (common cuckoo): 104059611 Help Entry 104059611         CDS       T08597                                  Symbol NRDE2 Name (RefSeq) protein NRDE2 homolog   KO K26109   nuclear exosome regulator NRDE2 Organism cuca  Cuculus canorus (common cuckoo) Brite KEGG Orthology (KO) [BR:cuca00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cuca03019]     104059611 (NRDE2) Messenger RNA biogenesis [BR:cuca03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      104059611 (NRDE2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NRDE-2 TPR_14 Motif Other DBs NCBI-GeneID:  104059611 NCBI-ProteinID:  XP_009559596 LinkDB All DBs Position Unknown AA seq 1167 aa AA seqDB search MALFPAFAEPGEPPAGGTGGASKDLDWLSNPSFSTEDALLLHQRTTEVANLIPEKSPLIR TTSRSELSGESDTDESLKQSSKKRKKKKKKHHYYKKTKKKTKGDSSSSESDLDTKHIKDK ASGSGRNRQKEAAANLDKKTSNLTGSRFIWLDDIQALTAETFRIDKKPDPANWAYKSLYR GDIARYKRRGESCLGLDAKKQCITWDSSASKKKQLQRRPDRYFTKDNVKMLNIDGIPVCN KSSPSDSTAFIPVLQVEIDDPSDTTEVNPLGIYDPSVTEWLQGKGCKSADHESVNTQQTN QDPGISISSILMAKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYASKGEQEVRRK SLKLILEKKLAILERAIESNPSNVDLKLARLKICTEFWEPPSLIKEWQKLIFLHPNNPEL WKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEEAMLAIFIQQC HFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKGARG WKAWMHQQEKGGWIALKPDDDDDEEIDEDQEIKDKTLPKWHIWLDIEYSREARHWLPWRP DKTKKETEEDCEDPERQVLFDDLGPSLIRLSSLDLQHQLLYSFLQFLGVPCTSKLFPSNL YIAMDENNIFDSVLSDEKPLTSVDCPLSGFNSIGHMDTMLRRRHHIGHYKEGEEFIQNVF HVLFQLFPGKEKSNLSLCWLQYEIFKVVQCLQTKKKKKLKAQGRKSKKLAKNLLKAPDNR NHLSLWKLYAYLEWLLGNTDDARKVFDTALCTAGTGGLKSPQLCSLSLLYAQLEVELLES LEGAAMSRAVHVLTKVAENGPYIPYSGQVLPVNILKARKTYEHALQDHLSKTPVSDKDQV SAANQLVNLVGCYALFQYLTVGIDAAVLIYAQTLEKLEASGLQKCENTGENFGVQNFPTA LEAVTVLHTNLLRFHMKISVYPLNPLREALTEALKRYPSNQSLWRSYINIQRKSHCASKA RRFFDGVTRSTNSLEPWLFAIQAEQMRKNLIEKVQRAGVGEIHSTIPETGLTNRIVALFE HAVQSENGTHCPLLWRMYLNFLASLGEKEKCKGLFYKALQNCPWAKVLYLDAVEYFPDHL QETLDLMTEKELRLRVPMEELDLLLEV NT seq 3504 nt NT seq  +upstreamnt  +downstreamnt atggcgctgttcccggccttcgccgagcccggggagccccccgccggcggcaccgggggc gccagcaaagatttggactggcttagtaacccaagcttctctacagaagatgcactatta ctgcatcagcgcactacagaagttgcaaatctcatccctgaaaaatcaccgctaataagg acaacttcaagatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtca agtaagaaaaggaaaaagaaaaaaaaaaagcatcactattataagaagacaaaaaagaaa accaaaggggactccagtagcagtgaatcagacctggacactaagcacatcaaggacaaa gcgtcaggaagtggcagaaatcgtcaaaaggaagcagcagcaaacctagataagaaaaca tcaaatcttactggcagtcgctttatttggcttgatgatatccaggctttaacagcagaa accttcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcga ggggacatagcaagatataaaagaaggggagagtcctgtcttggcttagatgcaaagaaa cagtgtataacttgggacagttctgcgtcaaaaaagaagcaattacagagacgacctgac cgctacttcacaaaggacaatgtgaagatgctgaacatagatgggattcctgtttgcaat aaaagttctccatctgactcaactgcttttataccagttttacaagtggaaattgatgat ccttctgatacaacggaggtaaatcctcttgggatttatgacccatcagttacagagtgg ctacaaggaaaagggtgcaagagtgcagaccatgagtctgtaaatacacagcaaacaaat caagatcctgggatcagcattagttccattctaatggcaaaagtggaagaacataacaag aaagtcagagaaaaccccagagatattaatgcatggatggaatttgtttcttttcaggat gagttaatgagaggacctagcccttatgcaagtaagggggagcaggaagtaagaagaaaa tcattgaagttaatcttagagaagaaactggctattttagagagggcaattgaaagcaat cccagtaatgttgatctgaaacttgccaggctgaagatctgtacagaattctgggaacca ccatctttgatcaaagaatggcagaagctgattttcttacatcccaataatccagagctg tggaagaaatatctcctgttctgtcaaagtcagttcacaaccttttctgtttcaaaaatc aatagtctctatggaaaatgtttgactacattggcagctgtacaggatggcagcatggtg tcacatcctctactgcctggtacagaagaagctatgctagctatatttattcagcagtgc cactttctgagacaagctggccattctgagaaagcagtgtctttgtttcaggctctgatt gactttacgttctttaaacctgacagtgtgaaagatctgccaacaaggggacaggtggaa ttctttgaacctttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggc tggaaagcatggatgcaccaacaagaaaagggtggctggattgctcttaagcctgatgat gatgatgatgaagagatagatgaagatcaagaaataaaggataaaacgctccctaagtgg cacatttggttagatattgaatattctcgtgaagcaaggcactggttaccttggaggcca gacaaaaccaaaaaggagactgaagaagattgtgaagatccagaaagacaggtattattt gatgatctcggaccatctttaatccgactttctagtctggatcttcagcatcaacttttg tactcatttttgcaattcctgggagttccgtgtacaagcaaactctttccttccaatctc tatattgccatggatgaaaataacatatttgacagtgtgctttctgatgaaaagccactg acttctgttgattgtccactttctgggttcaacagtattggtcacatggataccatgcta cgacggagacatcacatagggcactataaagaaggagaggaattcatacagaatgttttt cacgttctgttccagctatttccaggaaaggaaaaatctaatctgtccctttgttggtta cagtatgaaatatttaaggtagttcagtgtctccaaacaaaaaaaaagaagaagctgaaa gcacaagggaggaagagtaaaaagttggccaagaatctccttaaagcacccgacaaccgt aaccacctttctctctggaaactgtatgcctatctagaatggctgctgggtaacactgat gatgccaggaaggtatttgatacagctctttgcacagcaggaacaggaggactgaagagt ccccaactctgcagcctcagtctgctttatgctcagcttgaagtggaactattagaaagt ctagaaggagctgctatgtcacgtgccgttcatgtactgaccaaagtggctgaaaatgga ccgtatataccctatagtggacaagtgttacctgtgaatatcttgaaagctcgtaaaacg tacgagcatgcactgcaagatcatttaagtaaaacaccagtttctgataaggatcaggtc agtgctgccaatcagctggttaacttggttggttgttatgcactgttccagtatttgact gttgggattgatgctgcagtattaatatatgcacagactttggaaaaacttgaagcttct ggtctgcagaaatgtgaaaatactggagagaattttggtgttcaaaattttcccactgct cttgaagctgtcacagtgctgcatacaaatttactcagattccacatgaaaattagtgtt tatccattgaatcctctgcgagaggcactaacagaagctctgaaacggtatcctagcaac cagtctctttggaggtcatatatcaacatccaaaggaagtctcactgtgctagcaaagca agaagattttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcc atccaagcagagcagatgagaaaaaacctcattgagaaagtccagagggcaggtgttggt gaaatacattccactattcctgaaactgggttaacaaatcggattgtagctctatttgaa catgcagttcagagtgaaaatggtacccactgtccactgctgtggaggatgtatttgaac tttctggcttcactaggagaaaaagaaaaatgcaaaggattgttttataaagcccttcaa aactgtccttgggcaaaggtgctctatttggatgcagtagagtacttccctgaccatttg caagagacgcttgatttaatgactgaaaaagaattgaggctgcgggtacctatggaagag ctggatctactattagaggtttaa

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