Cuculus canorus (common cuckoo): 104060281
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Entry
104060281 CDS
T08597
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104060281 (SOX13)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104060281 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
CREPT
Motif
Other DBs
NCBI-GeneID:
104060281
NCBI-ProteinID:
XP_009560349
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSMRSPVSPPLELDGAGNMVNCTIKTEEKKEGGYESPPGAAPSTKPHPNDPPGPPPKEGT
DPQALPQESCSPTSDVLEPRRSAFEPAVSSQEKLDFNRNLKEVMPAIEKLLSSDWKERLL
GRNTAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVTPDSQLA
LPIQPIPCKPVDYPVQLLHSPPPPTLKRPAGSGHLQMQETSQPLNLTAKPKGSDLPSASS
SPSLKMSSCQSLTPSHGATRDLQTSPSNLPLGFLGEGDAITKAIQDARQLLHSHSGAIEA
SLSNPYRKDHVGIDSSPVKERMEETPAHRLDEAMLTCEMDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQMPPASSDVLYQRPV
GMQLTPPLMEHYLPRSMDPSMPVIVNTRSLKEGDGGGDDGHSVADGEMYRYSEEEDSEGE
DKSDGELVVLTD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctgtttctccccccctggagctcgatggagcgggcaacatggtg
aactgcaccatcaagacggaggagaagaaagagggtggctatgagtctccaccgggggct
gcccccagcaccaagccccatcccaatgacccaccggggccaccgccgaaggagggcacc
gacccccaggccctgccgcaggagtcctgctcgcccaccagtgatgtgctggagcccagg
cgctctgcctttgagccagctgtcagcagccaagagaagctggacttcaacaggaacttg
aaggaggtgatgccagccattgagaagttactgtccagtgactggaaagagcggctgctg
ggccgaaacactgccgagtccaaggaagtgaaaggaacccaggaaagcctggcagagaag
gagctccagttacttgtcatgatcaaccagctgtccacactgcgggaccagctcctgacg
gcccactcagaacagaagaacatggccgcgatgctgtttgagaagcagcagcagcagatg
gagctagcgcggcagcagcaagagcagatcgccaagcagcagcagcagctcatccagcag
cagcacaaaatcaacctcctgcagcaacagatccagcaggtcaacatgccctatgtcatg
atccctgccttcacccccagccaccagcctctccctgtcactcctgactcccagttagcg
ctgcccatccagcccatcccctgcaaaccagtggattacccggtgcagctgctgcacagc
ccccctcctcccacgctgaagagacccgctggctcaggccacctccagatgcaggagacc
tcacagccactgaatctgacagccaaacccaaaggctctgacctccccagtgcctccagc
tcacccagtttgaagatgagcagctgccagtccctcacaccgagtcacggggccaccagg
gacctgcagaccagcccgtccaatctgcctctggggttcctgggtgaaggcgatgccatc
accaaagccatccaggatgcacggcagctgctgcacagccacagtggggccatagaggca
tcactgagcaatccctaccgcaaggaccatgttgggattgattcttccccagtgaaggag
cgaatggaggagacccctgctcaccggctggatgaggctatgttgacctgtgagatggat
ggctcacggcactttcctgagtccaggaacaacaaccacatcaagcggcccatgaacgcc
ttcatggtgtgggcaaaggatgagaggaggaagattttgcaggccttcccagacatgcac
aactccagcatcagcaagatcttgggctcacggtggaagtccatgacaaaccaggagaag
cagccctactacgaagagcaagcccgtctgagccggcaacacctggagaaatacccggac
tataaatacaagccccgacccaaacgcacctgcatcgtggaggggaagcgcctgcgtgtg
ggcgagtacaaggcgctcatgaggaaccggcggcaggacgccaggcagggctacttgata
gggccccagggcagccagatgccccctgcctcctcggatgtactgtaccagcggccagtg
ggcatgcagctgaccccacccttgatggagcactacctgccccgcagcatggaccccagc
atgcccgtcatcgtcaacacgcgcagcctcaaggagggtgacggtggtggtgacgatggg
cactcggtagctgatggtgagatgtaccgctacagtgaggaggaggactcggagggcgag
gacaagagtgatggcgagctggtggtgctgacggactaa
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