KEGG   Cuculus canorus (common cuckoo): 104060281
Entry
104060281         CDS       T08597                                 
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cuca03000]
    104060281 (SOX13)
Transcription factors [BR:cuca03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    104060281 (SOX13)
SSDB
Motif
Pfam: HMG_box HMG_box_2 CREPT
Other DBs
NCBI-GeneID: 104060281
NCBI-ProteinID: XP_009560349
LinkDB
Position
Unknown
AA seq 612 aa
MSMRSPVSPPLELDGAGNMVNCTIKTEEKKEGGYESPPGAAPSTKPHPNDPPGPPPKEGT
DPQALPQESCSPTSDVLEPRRSAFEPAVSSQEKLDFNRNLKEVMPAIEKLLSSDWKERLL
GRNTAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVTPDSQLA
LPIQPIPCKPVDYPVQLLHSPPPPTLKRPAGSGHLQMQETSQPLNLTAKPKGSDLPSASS
SPSLKMSSCQSLTPSHGATRDLQTSPSNLPLGFLGEGDAITKAIQDARQLLHSHSGAIEA
SLSNPYRKDHVGIDSSPVKERMEETPAHRLDEAMLTCEMDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQMPPASSDVLYQRPV
GMQLTPPLMEHYLPRSMDPSMPVIVNTRSLKEGDGGGDDGHSVADGEMYRYSEEEDSEGE
DKSDGELVVLTD
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgtccatgaggagccctgtttctccccccctggagctcgatggagcgggcaacatggtg
aactgcaccatcaagacggaggagaagaaagagggtggctatgagtctccaccgggggct
gcccccagcaccaagccccatcccaatgacccaccggggccaccgccgaaggagggcacc
gacccccaggccctgccgcaggagtcctgctcgcccaccagtgatgtgctggagcccagg
cgctctgcctttgagccagctgtcagcagccaagagaagctggacttcaacaggaacttg
aaggaggtgatgccagccattgagaagttactgtccagtgactggaaagagcggctgctg
ggccgaaacactgccgagtccaaggaagtgaaaggaacccaggaaagcctggcagagaag
gagctccagttacttgtcatgatcaaccagctgtccacactgcgggaccagctcctgacg
gcccactcagaacagaagaacatggccgcgatgctgtttgagaagcagcagcagcagatg
gagctagcgcggcagcagcaagagcagatcgccaagcagcagcagcagctcatccagcag
cagcacaaaatcaacctcctgcagcaacagatccagcaggtcaacatgccctatgtcatg
atccctgccttcacccccagccaccagcctctccctgtcactcctgactcccagttagcg
ctgcccatccagcccatcccctgcaaaccagtggattacccggtgcagctgctgcacagc
ccccctcctcccacgctgaagagacccgctggctcaggccacctccagatgcaggagacc
tcacagccactgaatctgacagccaaacccaaaggctctgacctccccagtgcctccagc
tcacccagtttgaagatgagcagctgccagtccctcacaccgagtcacggggccaccagg
gacctgcagaccagcccgtccaatctgcctctggggttcctgggtgaaggcgatgccatc
accaaagccatccaggatgcacggcagctgctgcacagccacagtggggccatagaggca
tcactgagcaatccctaccgcaaggaccatgttgggattgattcttccccagtgaaggag
cgaatggaggagacccctgctcaccggctggatgaggctatgttgacctgtgagatggat
ggctcacggcactttcctgagtccaggaacaacaaccacatcaagcggcccatgaacgcc
ttcatggtgtgggcaaaggatgagaggaggaagattttgcaggccttcccagacatgcac
aactccagcatcagcaagatcttgggctcacggtggaagtccatgacaaaccaggagaag
cagccctactacgaagagcaagcccgtctgagccggcaacacctggagaaatacccggac
tataaatacaagccccgacccaaacgcacctgcatcgtggaggggaagcgcctgcgtgtg
ggcgagtacaaggcgctcatgaggaaccggcggcaggacgccaggcagggctacttgata
gggccccagggcagccagatgccccctgcctcctcggatgtactgtaccagcggccagtg
ggcatgcagctgaccccacccttgatggagcactacctgccccgcagcatggaccccagc
atgcccgtcatcgtcaacacgcgcagcctcaaggagggtgacggtggtggtgacgatggg
cactcggtagctgatggtgagatgtaccgctacagtgaggaggaggactcggagggcgag
gacaagagtgatggcgagctggtggtgctgacggactaa

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