Cuculus canorus (common cuckoo): 104061838
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Entry
104061838 CDS
T08597
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104061838 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104061838 (USP47)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104061838 (USP47)
Peptidases and inhibitors [BR:
cuca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104061838 (USP47)
Ubiquitin system [BR:
cuca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104061838 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104061838
NCBI-ProteinID:
XP_009562124
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MMPEDMFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTP
LKRLFEDVASKVGYVNGTFDLVWGNGDNVTDTTPIDQNSDKTILDAGFEPGKKNFLHLTD
KDGEQPHIIPEESGTTDESTQDRFIGPLPRECSVGCTNDYVSQSYSYSSVLSKSETGYVG
LVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKR
AIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYV
RCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYFCERCKK
KCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSP
QTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESSSAAERISKAGSEKSSLLYEL
FSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSA
FASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKI
KLFCMHPTKQIMMENKLEVHKDKTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLE
RSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVVDLKTESVA
PPISVRAYLNQTVSEFKQLMSKATHLPADTMRVVLERCYNDLRLLNVSSKTLKAEGFFRS
NKVFIESSESSDRHVAYTDSHLWRLLDRHANTIRLYVSLPEQSPGSQFRRTVYQKPSGVA
GNLVEACGRVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTEASDFENIE
SPTNEIDSSASAENREIENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSD
TLCNVDNTPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESSKSRGEA
QYMYFKSEPYAADEGAGDGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASN
QEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKG
MTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVF
LEILDGIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIALEN
IEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLHICDDGAVIFYRDKTEELMELSD
EQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgaagatatgttttggagttgcagacaaagtatctttgcggaaatgaagaag
aaattttcacaggtggaaagtgctgctgaagaacccagagtgctgtgtataatacaagat
accacaaattccaagacagtgaatgagcgtgttaccttgaacctgccagcttccaccccg
cttaaaaggctatttgaagatgtggcttcaaaagtgggctatgtgaatggaacttttgat
ttagtgtggggaaatggagataatgtaacagatacgactccaatagatcagaacagtgac
aaaactattcttgatgctggttttgagccagggaagaagaactttctgcatttgacagac
aaagatggtgagcaacctcatataataccggaggagtcaggtacaacagatgagagtacg
caagacagatttataggccctcttccaagagaatgctctgttggctgtaccaatgactat
gtcagtcaaagctactcttattcttcagtcctgagcaaatcggagacaggttatgtgggg
ctagtaaatcaagccatgacttgctacttgaacagccttctgcaaacacttttcatgact
cctgaatttagaaatgcgttatataagtgggaatttgaagaatctgaagaggatcctgtg
acgagtatcccctaccagcttcaaagactgtttgttttactgcagaccagcaaaaaaaga
gcaattgaaacaacagatgttacacggagttttggatgggatagcagtgaggcgtggcag
caacatgatgtgcaggagctttgtagagtcatgtttgatgctttggaacagaaatggaag
caaacggaacaggccgatcttataaatcagctgtatcaaggcaaactgaaggactatgta
agatgtctagaatgcggctacgaaggctggagaattgacacttacctggatattcctttg
gtcatccggccgtatggctccaaccaggcgtttgctagcgtggaagaagcactgcatgct
ttcattcagcccgaaattcttgatggccccaatcagtatttttgtgaacgatgtaagaag
aaatgtgatgcaaggaagggtctgcggttcttgcattttccatatctgctgacattacag
ctgaagagatttgactttgattataccactatgcacagaattaaactcaatgatcgtatg
acttttcctgaagagttagacatgagtgtcttcattgatgttgaagatgagaagtctcct
cagaccgagagttgcactgatagtggagctgaaaatgagggcagttgtcacagtgatcag
atgagcaatgatttttctaatgatgatggagttgatgaaggaatctgcctcgaaagcagt
agtgcagcagaaagaatttctaaagctggcagtgaaaagagttccttactgtatgagctc
ttttctgttatggttcattctggaagtgctgctggtggccattattatgcctgtataaaa
tcttttagtgatgaccagtggtacagctttaatgatcagcatgttagcaagataactcag
gaagatattaagaaaacgtatggtgggtcttccggaagcagaggctattattccagtgct
tttgctagctccacaaatgcatacatgctgatatatagactgaaggatccaacaagaaat
gcaaagtttcttgaagcacatgagtatccagagcatattaaacaattggtacagaaagag
agagaactggaagaacaagaaaagaggcaacgtgaaattgagcgcaatacttgcaagatt
aaattgttctgcatgcatcctacaaaacaaataatgatggagaacaaattagaggttcat
aaggacaagacactgaaggaagctgtggaaatagcttacaagctaatggatttagaagaa
gctgttcctttggattgctgtcgtcttgtcaaatatgatgagtttcatgattatttggaa
cgatcttatgaaggagaagaggacacaccaatgggtttattgcttggaggtgtcaaatca
acatacatgtttgacttgctgttagaaacaagaagacctgaccaagtgttccagtgttac
aaacctggtgaggtcatggtaaaggttcacgtagttgacctaaaaactgaatctgttgct
cctccaataagtgtccgagcttacttgaatcaaacagtttcagaatttaaacaactgatg
tcaaaggctacgcatctgcctgctgatactatgcgggtagtattagaacgttgctacaat
gacttgcgtcttctgaacgtttccagcaaaacactgaaagccgaaggcttttttagaagc
aacaaggtatttattgaaagctcagagtcttcagatcgtcacgtggcatatacagattct
catttatggagacttttggatcgtcatgcaaacacaatcaggctatatgtttcattacca
gagcaatcgcctggatctcagtttagacgaacagtttatcagaagcctagtggagttgca
ggcaacttggttgaagcctgtggaagagtgaaaggacctgtgggtaatatgaaatctgta
gaggcgattctggaagaaagtactgaaaagcttaaaagcttgtccctgcagcagcagcag
gagggggataatggagacagcagcaaaagcacagaagccagtgattttgagaacattgaa
tcacctacaaatgaaatagactcttcagcatctgcagagaacagagaaattgaaaaccaa
attcagatttccgatccagaaaatctccagtctgaggaacggtcagattcagatgtaaat
aatgacaggagtacaagttcagtggacagcgatatcctcagctccagtcatagcagcgat
actttatgcaacgtggataatacaccacttcccttggctaatggacttgattctcatagt
atcacaagtagcaggcgatcaaaagcaaatcaggggaagaaagaaacctgggacacagca
gaagaggattctggaacagatagtgaatatgatgaaagcagcaagagcagaggagaagca
cagtatatgtactttaagtcagaaccctacgctgcagatgaaggtgcaggagacggacaa
aaatggcttatggtgcatgttgacaaaagaattacactgtctgccttcaagcaacatttg
gagccttttgtcggagttccatcttctcacttcaaagtctttagagtctatgccagcaat
caagaatttgagagtgttcggctgaatgagacactttcatcattttctgatgacaataag
ataactattagacttggaagagcccttaagaagggtgaatacagagtcaaagtctatcaa
cttctggtaaatgagccagagccatgcaagtttcttctagatgcggtttttgctaaagga
atgactgtccggcagtcaaaagaagagctgcttcctcagcttcgagaacaatgtggccta
gacttgacaattgacaggtttcgcctccgaaagaaaacctggaagaacccaggcactgtg
tttttggattatcatatctatgaagaagatattaatatttcaagcaattgggaggtcttc
ttggaaatacttgatggaatagaaaagatgaaatccatgtcacaactcgctgttctgtca
agacgatggaggccatcagagatgaaactagattctttccaggaagtagtgctagaaagc
agcagtgttgaagaattaaaagagaagctgagtgaaattagcggaatagctttagaaaac
atagaatttgcgaagggcagaggaacgtttccatgcgacatttccatactagagattcac
caagacttggactggaatcctaaagtatctacattaaatgtctggcctctgcacatttgt
gatgatggtgcagtaatattttatagggataagactgaagaattaatggaattatcagat
gagcagagaaatgaactgatgaaaaaggaaagcagcagactgcagaaaactggacaccgg
gtaacctactctcctcgtaaagaaaaagcactaaaaatttatctggatggagcgccaaat
aaagatttgactcaagactga
DBGET
integrated database retrieval system
