Cuculus canorus (common cuckoo): 104063208
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Entry
104063208 CDS
T08597
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03250
Viral life cycle - HIV-1
cuca04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104063208 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104063208 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104063208 (SAMHD1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104063208 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HARE-HTH
HD_assoc_2
ODP
ERAP1_C
Motif
Other DBs
NCBI-GeneID:
104063208
NCBI-ProteinID:
XP_009563660
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MLFDLQLKTCDSLLPDERLKVLACLNKLRQQDVDVMKVFNDPIHGHIEIHPLLVRIIDTP
EFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGYLAGCLVRELKERQPELNITQRDILCV
EIAGLCHDLGHGPFSHMFDGRFIPLTRPDLKWKHETASVEMFEHLIASNKLEEVMKSYGL
VLEEDIDFIKEQIGGPIDETACGESWPYRGRQKEKSFLYEVVANKKNGIDVDKWDYFARD
CHHLGIQNNFDYRRLLKFIRVCEVKNQKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKIG
NIIEIMITEAFQKADKFFKIEGSGGKLYQISTAMEDMEAYTKLTDNIYLEILHSSCPELE
EAREILRKIERRQLYKFLGETHPETKREVVKNSDLAESIANSKPEKDPPDVELKAEDFII
DVISMDYGMKEQNPIDNVLFYCKADPSKAVKITKEQVSKLLPMTFAEQIIRVYCKSQDPD
VISAAKQYFVQWCIEKDFTKPQDGDVVAPHLTPMKKSWNNTRDDEQRRASEPSCKQRLPF
DK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgacctgcagctgaagacttgtgacagtctcctcccagacgagagactgaaa
gtgctggcctgcctgaacaagctgagacagcaggacgtggacgtgatgaaggtttttaat
gatccaattcacgggcacattgagatacatccccttcttgtcaggatcattgacacacct
gagtttcagcgcctccgatatattaagcagctgggtggcacttactttgtttttccagga
gcctctcacaaccggtttgaacactccataggggtgggctacctagcaggatgtctagtt
cgtgaactgaaggagaggcagccagaattgaatataacccagcgagacatcctctgtgta
gaaattgctggcctttgtcatgatttgggtcatgggccattttcccacatgtttgatgga
agatttatcccactcactcgtccagatttgaagtggaagcatgaaactgcttctgttgaa
atgtttgaacacctgatagcttccaataaactggaagaagtcatgaagtcttatggtctc
gtcctggaagaagatatagacttcatcaaggagcaaataggagggcctatagatgagact
gcttgtggggagtcgtggccctaccgtggtcggcagaaggagaaaagcttcctctatgag
gtagttgctaacaaaaaaaatggcattgatgttgacaaatgggattattttgcaagggat
tgccatcacctaggaatccagaataattttgattataggcgactacttaaattcattcgg
gtctgtgaagtaaaaaaccagaagcatatctgtacccgcgataaggaagttggaaatttg
tatgatatgttccacacgcggaattgtctgcaccggcgagcataccagcataagattggc
aacatcattgaaataatgattacagaggcctttcaaaaagcagacaaattttttaaaata
gaaggctccggaggaaaactgtaccagatttcaacagcgatggaggacatggaggcctac
accaaactgactgataatatctacctggaaattctgcactcaagttgtccagaactggag
gaagcacgagaaattttgcgtaaaatagaacgtcgtcagttatacaagtttttaggagag
actcatcctgaaacaaagagggaagttgtgaagaatagcgacctggcggaaagcatcgct
aactccaagccggaaaaggatcctccagatgtggaactaaaggctgaagatttcataatt
gatgttatcagtatggattatggcatgaaagaacagaatcccattgataatgttctcttc
tactgcaaggctgatccttccaaggcagtcaagatcactaaagaacaggtttcaaagctt
ttacccatgacatttgcagagcagattatccgggtttattgcaaaagtcaggatccagat
gttatttcagctgcaaaacagtattttgttcagtggtgcatagagaaggatttcaccaaa
ccacaggatggtgatgtggttgcccctcatctaactccaatgaagaaaagctggaataac
acaagagatgatgaacaaagaagagcttccgaacccagctgcaaacaaaggcttcctttt
gataagtaa
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