Cuculus canorus (common cuckoo): 104065560
Help
Entry
104065560 CDS
T08597
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104065560 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104065560 (DDX41)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104065560 (DDX41)
Spliceosome [BR:
cuca03041
]
Complex C
Other components
Complex C specific factors
104065560 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
UTP25
SecA_DEAD
CMS1
Motif
Other DBs
NCBI-GeneID:
104065560
NCBI-ProteinID:
XP_009566347
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MLQKLLQMRRKVVLEEEQRDSGSEQRGDEDDIPLGPQSNISLLDQHQHLKEKAEARKESA
KEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRK
KYHILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIA
FTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLLQ
EDGLPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDE
ADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAAS
LDVVQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGG
KDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR
SGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDETMLDIGGERGCAFC
GGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaagctgctgcagatgcggcggaaggtagtgttggaggaggagcaacgagac
agcgggagcgagcagaggggagatgaagatgacatccccctggggccccagtccaacatc
agcctcctggaccagcaccagcatctcaaagagaaggcggaagctcggaaggagtcagcc
aaggagaagcagctgaaggaggaggagaagatcctggagagtgtggcagaaggccgagct
ctgatgtcagtgaaggagatggcaaagggcatcacctacgatgatcctattaaaaccagc
tggagagcacctcgttacatcctgggcatgtcagaggcacggcatgaccgtgtgcgcaag
aagtaccacatcctggtggagggggaaggcatcccaccccccatcaagagcttcaaggag
atgaagtttccagcagctatcctgaggggcctgaagaaaaaaggaatccaacagccgaca
cccatacagatccaaggcatccccacaatcctctcgggaagggacatgattggtattgca
ttcactggctctgggaagaccttggtgttcactctcccagtgataatgttctgcctggag
caggagaagcggctaccattttccaagcgagagggcccctacggactcatcatctgtccc
tcgcgggagctggcccggcaaacccacggcatcatcgagtactactgccgcctgctgcag
gaggacggcctgccaccgctgcgctgcgccctctgcatcgggggcatgtctgtcaaggag
cagatggagacgatcaaacacggtgtgcacatgatggtggcaacccctggccgcctgatg
gacctgctgcagaagaagatggtcagcctggacatctgccgttacttggccttggatgag
gctgacaggatgatcgatatgggctttgaaggggacatccgtaccatcttctcctacttc
aagggccagcgacagaccctcctcttcagcgccacaatgcccaagaagatccagaatttt
gccaagagtgccctggtgaagccaatcaccattaacgttgggcgagcgggtgctgccagc
ctggacgttgtgcaggaagtggagtatgtgaaagaggaggccaagatggtgtacctcctt
gagtgcctgcagaagactccgccacctgtgctgatctttgcagaaaagaaggcagatgtc
gatgcgatccatgaatacctgctgctcaagggtgtggaagctgtggccatccacggaggg
aaagatcaggaggaacggacaaaagccatcgaggctttccgagatgggaagaaggatgtc
ctggttgctactgatgttgcttccaagggcctagacttcccagccatccagcacgtcatc
aactatgacatgccggaggaaattgagaactatgttcaccgtattgggcgtacaggccgt
tcaggcaacactggcattgccaccaccttcatcaacaaggcttgtgatgagtcggtgctg
atggacctgaaggccctgctcctggaggcgaagcagaaggtgccgccggtgctccaggtg
ctgcactgtggggacgagaccatgctggacatcggaggcgagcgaggctgtgccttctgt
ggcggcctgggccatcgcatcaccgactgccccaagctggaggccatgcagaccaagcaa
gtcagcaacatcggtcgcaaggactacctggcccacagctctatggacttctaa
DBGET
integrated database retrieval system
