Cuculus canorus (common cuckoo): 104069012
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Entry
104069012 CDS
T08597
Symbol
TRMT2B
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104069012 (TRMT2B)
Enzymes [BR:
cuca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
104069012 (TRMT2B)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104069012 (TRMT2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_32
Methyltransf_11
Ubie_methyltran
Methyltransf_15
PrmA
Methyltransf_12
AviRa
N6_N4_Mtase
Methyltransf_23
UPF0020
mRNA_G-N7_MeTrfase
Motif
Other DBs
NCBI-GeneID:
104069012
NCBI-ProteinID:
XP_009570275
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MALSCALRLLHWHLRPSNAPLSSLPGQDRGVLNNKKIAAKWKEKKKVREGCSLPGSSWEE
RLANAVTPLWRLPYQEQLQVKYESQRKILQTLTSRLEELGIDAQKPDGLCCPLQPVVPSP
VINGYRNKSTFSVNQGPDGNPKTVGLYVGTGRARNIVCVKANHVENIPPKHKEVAQWYEE
YIRCSPLEPCLLFHEGGHWRELVVRTTSRGHTMAIITFHPQELGQEALATQKALLKEFFT
CGPGAVCALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEEVLGLKFRISPDAFFQVNTG
GAEVLYQAVRELSQAGGDTVLLDICCGTGTIGLSLAHQVSKIIGIEVVEKAVEDARWNAA
FNGISNCEFHSGKAEAVLPQLLSSWEDSQALVAVVNPSRAGLHYRVVRAIRNCKSIRRLL
YISCKPEGEAMRNFLELCCPPNPGKKLAGEPFAPTLAIPFDMFPHTLHCELVLLFTR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcctgtgcattgaggctactgcactggcaccttcgcccatcgaatgctccc
ctgagcagcctgcctggtcaggaccgtggtgtgctgaacaataagaagatagcagcaaag
tggaaggagaagaaaaaggtcagggagggctgcagcctaccaggttcctcctgggaggag
aggctagcaaatgcggttactccactgtggagacttccttatcaagagcagctgcaggtg
aaatatgaaagccagaggaagattttgcagacactgacatctcgtcttgaggagctggga
atagatgcgcagaaacctgatggactctgctgtcctctccagcctgtagtcccttcgccc
gtcattaatggctaccgaaacaaatctactttctccgtgaaccaaggaccggacggaaac
cccaaaactgtggggttgtacgtgggaactggcagagcaagaaatattgtctgcgtgaaa
gccaaccacgtggagaacatacccccaaaacacaaagaagtagcccagtggtacgaggag
tacatccgttgctcacccctggaaccctgcctcctgttccatgaaggtggacactggcgg
gagctcgtggtacgcaccaccagccgtggccacaccatggctatcatcaccttccacccc
caggagctgggccaggaggcactggctactcagaaagcattgctgaaggagttcttcacg
tgtggacctggagcagtctgtgccttgacttcactttatttccaagagagcaccatgaca
cgctgctctcacgagcagtcccccttccagctccttcatggagaaccgcacatctttgaa
gaagtgctcggcctgaagtttcgcatctctccagatgcctttttccaagtaaacacaggt
ggagcagaagttctgtaccaggcggtcagggagctgagtcaggctggcggggacactgtc
ctcctcgacatttgctgcggaacaggcacaattggtctctctctggctcaccaagtgtcc
aagattattggtattgaggtggtggagaaagcagtagaggatgccaggtggaacgcagca
ttcaatggaatttcaaactgtgagtttcacagtggaaaggcagaggccgtgttaccacaa
ctcctgtcatcgtgggaggattctcaagcccttgttgctgtggtgaacccatcccgagcc
gggctccattacagggttgtgcgagctatccgaaactgcaagtccatccgaaggctgctc
tacatctcctgcaagccagagggtgaagctatgaggaactttcttgagctgtgctgccca
cccaacccagggaagaagctggcaggagagccatttgcccccacgttggctatacccttt
gacatgtttccccatacacttcactgtgagctggtgctgctgttcacccgctga
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