Cheilinus undulatus (humphead wrasse): 121522778
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Entry
121522778 CDS
T07473
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121522778 (upf3a)
03015 mRNA surveillance pathway
121522778 (upf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121522778 (upf3a)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121522778 (upf3a)
mRNA cycle factors
P-body specific factors
121522778 (upf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
121522778
NCBI-ProteinID:
XP_041663359
LinkDB
All DBs
Position
15:complement(32227177..32239469)
Genome browser
AA seq
467 aa
AA seq
DB search
MRSEKDQMTVGKEKSGVEIQFRDLQGDQENIPGNPKQKEEKKEVFTKVVIRRLPPNLSKD
QLEEQLSPLPSYDYFEFFPADQSLYPHLFSRAYINFKNPEDILLFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKIEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSDKDIKIKLLKKTDRDDDVDSDRIKDKSDVGETERGKWEKSGGQMKSK
ELKEKGQPESDKEQREQHGRRQRDKDHRGKDEERKRQRHHYEFDKFMRRKDETKWGKGYC
QDRAKKEGHHHGYSYCPDSGDKLGKEDRDELGNRKERLRNKVSEKDRPAMQLYQPGARNR
KRMSSAGKGYDCIPVGHSPEPGSEHCYEMVPMATGIEKGFEKSKDEQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggaccaaatgacggttggcaaggagaaaagtggcgttgaaattcag
ttcagagaccttcaaggagatcaggaaaacatccccggtaaccccaagcaaaaagaagag
aagaaagaagtttttacaaaggtggtgattcgaaggcttcctcctaacctctcaaaagac
cagctggaggaacagctcagtccgctcccatcctacgactactttgagttcttcccagct
gatcagagtctttatccccatctgttctccagagcgtatataaactttaaaaaccctgaa
gatattctgctgtttagggaccgatttgatggttatgtcttcattgacaacaagggtcag
gaatatcctgccgtggtagagtttgcccccttccagaaaatctccaagaagaagctgaag
aagaaagatgcaaaagctgggagcatcgaagaagatccagaatataggaggttcctggag
aattactcctgtgatgaggagaaatcgatggccaacccagagaccctgctgggagagatc
gaggccaagaccagagagctcatagccaaacgcacaacaccgctgttggaatacatcaag
aataagaaaattgaaaaacagagaataagagaagagaaaagagaggagaggagaagacgg
gaactggagaagaaacgacaaagggaggaagagaagagaaagcgtcgagaggaggagcga
cgcaaacgtaaagaggcagagaagcagaagaagttatctgacaaagacatcaaaataaag
ctgctgaagaagactgacagagatgacgatgtggattcagacagaattaaggacaaaagt
gacgttggggagacggagagaggaaagtgggagaagagtggaggacagatgaagtcaaag
gagctcaaagaaaaagggcagcctgagagtgacaaggagcagagagagcagcacggccgc
agacagagagataaggatcaccgtgggaaagatgaagaaaggaaacgacagagacaccac
tatgagtttgacaagttcatgcgccgcaaagacgagaccaagtgggggaagggctactgc
caggaccgggccaagaaagagggacaccatcatggctactcgtactgtcctgacagtgga
gacaagctggggaaggaggacagggatgagctgggtaacaggaaggaacgcctccgaaac
aaggtgagcgagaaggatcgtccagccatgcagctctatcagccgggggctcgcaacagg
aagcgcatgagctctgcaggcaaaggctatgattgcatccctgttggccactcccctgaa
ccggggtctgagcattgttatgagatggttcctatggcaacagggatagagaaagggttt
gagaaaagcaaagatgaacagtaa
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