Curtobacterium sp. MR_MD2014: NI26_14610
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Entry
NI26_14610 CDS
T04180
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cum
Curtobacterium sp. MR_MD2014
Pathway
cum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NI26_14610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cum03019
]
NI26_14610
03400 DNA repair and recombination proteins [BR:
cum03400
]
NI26_14610
Enzymes [BR:
cum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI26_14610
Messenger RNA biogenesis [BR:
cum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NI26_14610
DNA repair and recombination proteins [BR:
cum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NI26_14610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
THOC2_N
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
AIV41015
UniProt:
A0A0N6W752
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All DBs
Position
3148500..3150131
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AA seq
543 aa
AA seq
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MQKELRTRAADVFGWDLHPEQEQVVDAVLDGRDALALMPTGSGKSAIYQVAALALDGPVV
VVSPLVALQEDQVVGIEDHPDAPRAVTINATRGSRQLEDAWDAVASGEARYVFLAPEQLA
KDEVVERLRDAGVALVTVDEAHCVSSWGHDFRPDYLVLGEVVERLGRPPVLAMTATGSTP
VRAEIVERLGMRDPLVVATGFDRPNLRFEVARHADDESKREAVVEQVVGLEGVGIVYVAT
RAETLVYADELVESGRRAKAYHAGLRVRDRERVHHEFLDGELDVVVATSAFGMGIDKPDV
RFVVHADVPESVDAYYQEVGRAGRDGDVGLATMHYRAEDLGLRRFFASGSPRPATLRAVF
DAVPAEGSVARSELAERSGLAARTAGRAANALVDAGALDDGEDGLTRRPDGPRDAEAAAG
LAKAQAKEREEIEESRIAMMRRFAETSGCRRQFLLGYFGDELAEPCGNCDTCTAGTAQDA
DAHGADGANDDAWPPESPVEHAQWGRGTVMSTEDDRLTVFFESAGYKTLGLADVEERHLL
ERV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaaggaactccgtacccgcgccgccgacgtcttcggctgggacctccaccccgag
caggaacaggtcgtcgacgccgtcctcgacggtcgcgacgccctggcgctcatgcccacc
ggctcggggaagtccgcgatctaccaggtcgccgcgctcgccctggacggcccggtcgtc
gtcgtctcgcccctcgtggccctgcaggaggaccaggtcgtcggcatcgaggaccacccg
gacgcgccccgagccgtcacgatcaacgccaccaggggcagccggcagctcgaggacgcg
tgggacgccgtggcgtccggcgaggcccggtacgtgttcctggcccccgagcagctggcg
aaggacgaggtcgtcgagcggctgcgcgacgccggcgtcgcgctcgtcaccgtcgacgag
gcgcactgcgtgtcgagctgggggcacgacttccgcccggactacctggtgctcggcgag
gtcgtggagcgcctcggacgcccgccggtgctcgcgatgaccgcgaccggttcgacgccc
gtccgcgccgagatcgtcgagcggctcggcatgcgggacccgctggtcgtcgccaccggc
ttcgaccggccgaacctgcgcttcgaggtcgcccggcacgccgacgacgagtcgaagcgc
gaggcggtcgtggagcaggtcgtcggactcgagggggtcggcatcgtctacgtcgccacc
cgcgccgagaccctggtgtacgcggacgaactcgtggagagcggtcgccgggcgaaggcg
taccacgcgggcctccgcgtgcgggaccgcgagcgggtccaccacgagttcctcgacggc
gagctcgacgtcgtcgtcgccaccagcgcgttcggcatggggatcgacaagccggacgtg
cgcttcgtcgtgcacgccgacgtccccgagtcggtcgacgcctactaccaggaggtgggc
cgtgccggccgcgacggcgacgtcggcctcgccacgatgcactaccgcgccgaggacctc
ggcctccgacgcttcttcgcgtccggctcgccgcgcccggccaccctccgtgccgtgttc
gacgccgtccccgccgagggatcggtggcccgttccgagctcgccgaacgctccgggctc
gccgctcgcaccgcgggccgtgccgccaacgccctcgtcgatgcgggcgcgctcgacgac
ggtgaggacggtctcacccgtcgaccggacggcccccgcgacgccgaggcggcggcgggg
ctcgcgaaggcgcaggcgaaggagcgcgaggagatcgaggagtcgcgcatcgcgatgatg
cgccggttcgccgagacctcgggctgccgccggcagttcctgctcgggtacttcggtgac
gagctcgccgagccgtgcggcaactgcgacacgtgcacggccgggaccgcccaggacgcg
gacgctcacggtgccgacggtgcgaacgacgacgcctggcccccggagtcgcccgtcgag
cacgcgcagtggggtcgagggacggtgatgagcacggaggacgaccggttgacggtgttc
ttcgagtccgccggctacaagaccctcgggctggccgacgtcgaggaacggcacctgctc
gaacgcgtctga
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