Cupriavidus malaysiensis: BKK80_15655
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Entry
BKK80_15655 CDS
T04978
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cup
Cupriavidus malaysiensis
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cup03009
]
BKK80_15655
Enzymes [BR:
cup01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BKK80_15655
Ribosome biogenesis [BR:
cup03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BKK80_15655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Orexin
Cupin_2
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
AOZ07093
LinkDB
All DBs
Position
1:complement(3459081..3460082)
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AA seq
333 aa
AA seq
DB search
MNELRHQIEKEAQAPAMGPQVAYVTVGEEADGQRIDNYLLKSAKGVPKSHVYRILRSGEV
RVNKGRVDATYRLKAGDVVRIPPIRVATAAPSTAFVPPASFPVLFEDAHLLIIDKPAGVA
VHGGSGVAFGVIEQLRQAHPEARFLELVHRLDRETSGILMLAKKRSALVGLHEQIRGNAL
DKRYFACVAGEFANARQHVKFPLFKYTTPDGERRVRVQADGLASHTVFNRVEAFSGFTLL
EAELKTGRTHQIRVHLAHSGFPIAGDEKYGDFALNKALARAGARPGLRRMFLHAHQLTFA
HPSTGEAITVRAPLPAECQAFLQQLREQAGRPG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttacgccatcaaattgaaaaagaggcgcaggcgcccgcgatggggcctcag
gtggcgtatgtgacggttggcgaagaggccgatggccagcgcatcgacaactacctgctg
aagtcggccaagggcgtgcccaagagccacgtttatcgcatcctccgttccggcgaggtg
cgggtcaacaaggggcgcgtcgacgccacttaccggctgaaagcgggagatgtggtgcgg
atcccgccgattcgcgtggcgactgccgcaccttccaccgccttcgtgccgccggcgagc
ttccccgtcctgttcgaggatgcgcacctgctgatcatcgacaagccggccggcgtggcg
gtccatggcggctccggcgtcgccttcggggtcatcgaacagttgcggcaggcccatccg
gaagcgcgcttcctggaactggtgcaccggctcgaccgggagacctcgggcatcctgatg
ctggccaagaagcgctcggcgctggtcggcctgcacgagcagatccgcggcaatgcgctc
gacaagcgctatttcgcctgcgtggcaggcgagttcgccaatgcccgtcagcatgtgaag
ttcccgcttttcaaatacaccacgcccgatggcgagcgccgggtgcgggtgcaggccgac
ggcctggcctcgcatacggtgttcaaccgggtcgaggccttctccggcttcacgctgctg
gaggccgaactcaagaccggccgtacgcaccagatccgcgtgcacctcgcccactcgggc
tttcccatcgcgggtgacgagaagtacggcgacttcgccttgaacaaggcgctggcccgg
gccggggcccggcccggattgcggcgcatgttcctgcatgcgcaccagctgaccttcgcc
catccgtcgaccggcgaggcgatcacggtgcgcgcgccgctgccggccgagtgccaggcc
ttcctgcagcaactgcgcgaacaggcggggcggcccggctga
DBGET
integrated database retrieval system
