Corynebacterium uterequi: CUTER_03740
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Entry
CUTER_03740 CDS
T03957
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cut
Corynebacterium uterequi
Pathway
cut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUTER_03740 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cut03400
]
CUTER_03740 (mfd)
Enzymes [BR:
cut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUTER_03740 (mfd)
DNA repair and recombination proteins [BR:
cut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
CUTER_03740 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
AAA_22
RecG_dom3_C
DUF4817
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKK10755
UniProt:
A0A0G3HDI2
LinkDB
All DBs
Position
780361..784020
Genome browser
AA seq
1219 aa
AA seq
DB search
MLAGLLTAIADEPKIKGLLASVGEPTLHLTAITQARPWALAAMAKKVPVLVVTATGREAE
DLAAELTAMLGEKVALFPSWETLPHERLSPGADIVGRRAQVLNHLADYRVVVTPARAWCQ
PVLAQADGRTPISLQVGEEFDLSALAADLIHRAYSHVDMVAKRGEFAVRGGILDIFPTTS
DYPVRVEFWGDEITDIRQFSVADQRAIPETDVSMVEVYPARELLIDESVAARAAALMVKH
PGNPALVELLSKLSEQVYADGMEALIPALTDSALITVDQLMPAGTHTVVVDPEKIRRRIE
DLISTDEEFLAAGWEAAAMGAHGPLAAEGLDLDASSYRSFESLEAGRKGPWWTLAAPGMM
NTDEASTLPLDFQPGPAPRGDLKDIAVMMATLRAHVADGGRGVFIAPTQAAIKRMVERFR
ENGISAHVATPGWQPRPGEVTLYQALSHAGLMFPAIKLVTITETDLTGNRVGDIAGAKRR
PAKRRNRVDPLALKTGDYVVHETHGIGKFLKMAERTIHTGDDTSRREYIVLEYAPSKRGQ
PADQLWVPMESLDLLSKYTGGEAPSLSKMGGSDWKNTKKKARAAVREIAGELVQLYAQRQ
SAPGHQFAPDTPWQAEMEDNFPYVETEDQMTAIEAVKADMEAATPMDRVIVGDVGYGKTE
VAVRAAFKAVQDGTQVAVLAPTTLLAQQHFRTFSQRMDGFGVNLKELSRFTTAKESKEIL
AGLADGSVDIVIGTHRLLQTGVHWKNLGLIIVDEEQRFGVEHKEHIKAMKASVDVLTMSA
TPIPRTLEMSLSGIREMTTMLTPPEDRYPVLTYVGAYEEKQVAAAIRRELLRDGQVFFVH
NKVADIEKRAREIRDLVPEARVVVAHGQMGEELLEKTVQGFWDREYDVLVCTTIVETGLD
IANANTLIVENAHHMGLSQLHQLRGRVGRSRERAYAYFLYPKGVTLTETSYDRLATIAQN
NDLGAGMAVAMKDLEMRGAGNVLGAQQSGHIAGVGFDLYVRLVGEAVDAYKALAKGEVVD
ATDQGPKEIRVDLPVDAHIPEAYINAERLRLEIYRKIAEAKQESDLTAVSEEMTDRYGPI
PEEVQRLLAMARLRFSARAAGVGDIQVQGTRLKLHPVVLADSKQIRLKRIVAGATYRAAA
QAIQVPLPRAGRGAGAPMLRDLDLVQWVADFLSDLFDVPEISVTGLARPPRESAASKGGA
RPLDSTTPRRRRRTITIRE
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctggactgctcacagctatcgccgacgaacccaaaattaaaggcttgctggcg
agcgttggcgaacccaccctgcatctcaccgccatcacccaggcacgcccgtgggcactc
gcggcgatggcgaagaaggtgccggtgctcgtggtgacggcgacaggtagggaagccgaa
gacctcgcagccgaactcacggccatgctcggggagaaggtcgcgttgttcccctcgtgg
gagacgctgccgcacgagcggctgtctccgggcgcggacatcgtcggacggcgagctcag
gtgctcaaccacctggcggactaccgcgttgtcgtcaccccggcgcgcgcctggtgccaa
ccggtcctcgcccaggccgacgggcgcacccccatttctttacaggtgggcgaggagttc
gacctatcggcgctggctgccgaccttatccaccgcgcgtactcgcacgtcgacatggtg
gccaaacgcggcgagttcgccgtccgcggcggcatcttggatattttccctaccacgtcg
gattacccggtgcgcgtggagttctggggcgatgagattacggacatccggcagttctcc
gtggcggaccagcgggccatcccggagacggacgtttctatggtggaggtttacccggcg
cgcgagctccttatcgatgagtccgtcgcggcccgggctgccgcgctcatggtcaaacac
cccggcaaccccgccctggtggagctgttgtcgaagctctcggagcaggtctacgccgac
ggtatggaagcgctcattccggcgttgaccgactcggcgctcatcaccgtcgatcaactc
atgccggcggggacgcacaccgtcgtcgtcgacccggagaagatccgccggcgcatcgaa
gacctcatctctaccgatgaggaattcctcgccgccgggtgggaggcggcggccatgggt
gcccatggtccgctcgccgccgaggggttggaccttgatgcgtcgtcgtaccgctccttc
gaatccctcgaagccggccggaagggcccgtggtggaccctcgccgcaccgggcatgatg
aacacggatgaggccagcaccctgccgctcgatttccaaccggggcccgcacctcgcggc
gacctcaaggacatcgcggtcatgatggccaccctcagagcacacgttgccgacggcggc
aggggtgtgttcatcgcgccgacgcaggcggccatcaagcgcatggttgagcgcttccgg
gagaacggcatttccgcgcacgtagcaaccccgggctggcaaccccgccctggggaagtg
acgctgtaccaggcgctgtcccacgccgggttgatgttccccgccatcaagctggtcacc
atcaccgagacggatctcaccggcaaccgcgtcggtgacattgcgggggcgaagcgtcgt
ccagccaaaaggcgcaaccgggtggaccccctggcgttgaagacgggggactacgtggtg
catgagacccacggcatcggcaaattcctcaagatggccgagcgcaccatccacaccggg
gatgacacgtcccggcgcgaatacatcgtgcttgagtacgcccccagcaagcggggccag
cctgcagaccagctgtgggtgcccatggagtcgctggacctcttgagtaagtacaccggc
ggggaggcgccttcgctgtcgaagatgggcggctccgactggaagaacaccaagaagaag
gcccgggccgccgtccgcgagatcgcgggcgagctggtgcagctttatgcgcagcgacag
tccgcgccgggccaccagttcgcccccgacaccccgtggcaggcggagatggaggacaac
ttcccctacgttgagaccgaagaccagatgaccgccatcgaggccgtcaaggcggacatg
gaggcggctaccccgatggaccgggtcatcgtcggtgacgtcggctacggcaagaccgag
gtggcggttcgtgcggcgttcaaggcggttcaggacggcacccaggtggcggtgttggcg
ccgacgacgttgctcgcccagcagcacttccggacgttttcgcagcgaatggacggtttt
ggcgtcaatctcaaggagctttctcggttcaccacagcgaaggaatccaaggagatcctc
gccgggttggccgacggttccgtcgacatcgtcatcggtacgcaccgcctcctacagacc
ggtgtgcactggaagaacctgggactgatcatcgtcgatgaggaacagcgctttggtgtg
gaacataaggagcacattaaggcgatgaaggccagcgtcgacgtgctcacgatgtcagcc
acacccatccctcgaaccctggaaatgagcttgtccggcatccgggaaatgaccaccatg
ctcaccccgccggaggaccgctacccggtgctgacctacgtcggcgcctacgaggaaaag
caggtcgcggccgccatccggcgcgagctgctgcgcgacgggcaggtcttctttgttcac
aacaaggtggcagacatcgaaaagcgggcacgggagatccgcgacctcgtgccggaggcg
cgcgtcgtcgtcgcccacggacagatgggtgaggagctgttggaaaagacggtccagggt
ttttgggaccgggagtacgacgtgcttgtgtgcaccaccatcgtggagaccggcctcgat
atcgccaacgccaacacgctcatcgtcgaaaatgcccaccacatgggcctgagccagctg
catcagctgcgcgggcgggtgggacgctcccgcgagcgcgcctatgcctacttcttgtat
ccgaagggtgtgacgctcacggaaacctcctacgaccgattggcgaccatcgcgcagaat
aacgacctcggcgccggcatggccgtggccatgaaagacctggagatgcgcggcgcgggc
aacgtcctcggcgcgcagcaatccggccacatcgccggcgtcggcttcgacctctacgtc
cgcctggtgggcgaggccgtcgacgcctataaggcgctggccaagggcgaggtggttgat
gctaccgaccaaggcccgaaggagatccgcgtcgacctgccggtggatgctcacatcccc
gaggcgtacatcaacgccgaacggctgcgcctggagatttaccggaagatcgccgaggcc
aagcaggagtccgatctcaccgcggtgagtgaggaaatgacggaccggtacgggccgatc
cccgaggaggtgcagcgcctgttggctatggccaggctgcgtttttccgcccgggccgcc
ggggtgggtgacatccaggtgcagggaactcggctgaagctccatccagtggtgctggcc
gattccaagcagatccggctcaagcgaatcgtcgccggcgccacgtaccgggctgccgcc
caggcgattcaggttcccctgccgcgcgccggtcgcggggcgggcgcccccatgctccgc
gacctggacctggtgcagtgggtggcggatttcctgtccgacctctttgatgtgccggag
atcagcgtcaccgggctcgcgcgcccgcctagggagtcggccgcgtcgaagggcggggct
aggccgttggattcgacgacgccgcgtcgacgccgccgaaccattactatccgggagtaa
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