Corynebacterium ureicelerivorans: CUREI_04560
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Entry
CUREI_04560 CDS
T03241
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
cuv
Corynebacterium ureicelerivorans
Brite
KEGG Orthology (KO) [BR:
cuv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CUREI_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuv03400
]
CUREI_04560
Enzymes [BR:
cuv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CUREI_04560
DNA repair and recombination proteins [BR:
cuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CUREI_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AIL96661
UniProt:
A0A077HJK5
LinkDB
All DBs
Position
867392..869668
Genome browser
AA seq
758 aa
AA seq
DB search
MANDQKVRVGGRELTVSNLDKVLYPATGTTKADVMRYYQAVAEVLIPQARRRPVTRKRWP
EGVEKQSFFRKDLEDSAPEWIATGTIQHTTSVNAYPLIDGSATLAWLAQVAALELHTPQW
RFGEDGAPRNPDRLVLDLDPGPGVELRDTAEVALWCREILEDMGLTCVPVTSGSKGIHLY
AGLDGASEADAVSKVAKTLAQHLERTHPDRVTADMSKARRKGKVFLDWSQNNGKKTTICP
YSLRGRQQPTVAAPRTWDEIEDPKLRQLEFEEVMERVTDGLDPMADLGTHRDDKLATYRS
MRDKRKTGEPVPDAAPQPREGEPIFVIGEHDASHLHWDFRLEHDGVLVSWAVPKGPPLET
DKNRLAVQTEDHPIEYAEFEGTIPKGQYGAGTVKIWDIGTCEVEKWRANEIIVVLHGRGD
GGLGGIPRRYALIRTEGKNWLLKLMRDQPLPARPLAPMLPTMATRGDITLDQHEGATFAF
EMKWDGYRILADVGRDVRLVSRGGKDYTRLFPHASELSQMLADGGCVDGELVALGPDGRP
DFSLLHNADRDGAHAHLRYMVFDLLRLGGRDLTAEPWSTRRELLGHMGDTEHVVVPPAYT
GSFDHAWRAAEELGLEGVVAKRTDSAYAPGERSSAWLKVKRALHQEVVVVGVRTGKRDIA
SLLVAVPDDEGELRYAGRVGTGFSNAQLADIGAKLRRIQRATPPVDVPAEDARDAWWVIP
EYVAEVQLAGATAEKKVRQASWRGWRDEKDPSEVRWEV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccagaaggtccgcgtcggcggccgcgagctcaccgtgagtaacctcgat
aaggtgctttacccggccacgggcacgaccaaggccgacgtgatgcggtactaccaggcc
gtcgccgaggtgctcatcccacaggcgaggcggcggccggtgaccaggaagcggtggccc
gaaggcgtcgagaagcaaagcttcttccgcaaagacctcgaagattccgcgcccgagtgg
atagccaccggcaccatccagcacaccacgagcgtcaacgcgtacccgcttatcgacggc
tccgccaccctcgcctggctggcccaagttgccgccctcgagctgcacaccccgcagtgg
cgcttcggcgaggacggggcaccccgcaacccggaccggctggtgctggacttagacccc
gggcccggcgtggagctgcgtgacaccgccgaggtggccctgtggtgccgcgagatcctc
gaggacatggggctgacctgcgtcccggtgacgtccgggtccaagggcatccacctctac
gcgggcctagacggggcaagcgaagcggacgccgtgtccaaggtggccaagacgctggcg
cagcatctcgagcgcacccacccagaccgggtgaccgccgacatgtcgaaggcgcggcgc
aaaggaaaggtctttttggactggagccaaaacaacgggaagaagaccaccatctgcccg
tactcgctgcgggggcggcagcagcccaccgtcgccgcgccgcggacgtgggacgaaatt
gaagacccgaagctgcgccagctcgagttcgaggaggtcatggaacgggtcacagatggg
ctcgatccgatggcggaccttggcacccaccgggacgacaagctggccacgtaccgctcc
atgcgcgacaagcgcaagaccggcgagccggtgccggacgccgcgccgcagccacgcgag
ggcgaacccatcttcgtcatcggcgagcacgacgcctcgcacctgcactgggatttccgg
ctggagcacgacggcgtgctcgtctcctgggccgtaccgaagggcccgccgctcgagacc
gacaagaaccgcctcgccgtgcagaccgaggaccacccgattgagtacgccgaattcgaa
ggcaccatcccaaagggccagtacggcgccggcacggtgaaaatctgggacatcggcacg
tgcgaggttgaaaagtggcgcgcaaacgagatcatcgtcgtactgcacggccgcggcgac
gggggcttgggcggcatcccgcgccgctacgcgctcattcgcaccgagggaaagaactgg
ctgctcaagctcatgcgcgaccagcctttgcccgcgcgcccgcttgctcccatgcttccc
accatggccacccgcggcgacatcacgctcgaccaacacgagggcgccacgttcgcgttc
gagatgaagtgggacggctaccggatcctcgcggacgtcggccgcgacgtccgtttagtc
agccgcggcggcaaggactacacccgcctcttcccgcacgcgagcgagctttcgcagatg
cttgccgacggcggctgcgtcgacggcgagttggtcgccctcgggcccgacggacgtccc
gacttttcgctgctgcacaacgccgaccgcgacggcgcgcacgcgcacctgcggtacatg
gtcttcgatctcctccgcctggggggccgcgacctgaccgcggagccgtggtccacccgg
cgcgagttgctgggccacatgggcgacaccgagcacgtggttgtcccacccgcgtacacc
ggcagcttcgaccacgcgtggcgcgccgccgaagagctggggctggagggagtggtggcc
aaacgcaccgactcggcgtacgcgccgggggagcgcagcagcgcgtggttgaaggttaaa
cgggcactgcaccaagaggtggtggttgtcggcgtgcgcacgggcaagcgcgacatcgca
tccctgctcgtcgcggtgccggacgacgaaggcgagctgcgctacgccggccgcgtgggt
acgggcttttccaacgcgcagctcgccgacattggggcgaagctgcgccgcattcagcgc
gcgacaccaccggtggacgtgcctgccgaggatgcgcgcgatgcttggtgggttataccg
gagtacgtggcggaagtgcagctcgcaggggccaccgcggagaaaaaagtgcgccaggcc
tcgtggcgaggctggcgcgatgagaaagatcccagcgaggtgcgttgggaggtctag
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