Corynebacterium variabile: CVAR_2247
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Entry
CVAR_2247 CDS
T01594
Name
(GenBank) hypothetical protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cva
Corynebacterium variabile
Pathway
cva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVAR_2247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cva03400
]
CVAR_2247
Enzymes [BR:
cva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CVAR_2247
DNA repair and recombination proteins [BR:
cva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CVAR_2247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEK37597
UniProt:
G0HFV5
LinkDB
All DBs
Position
complement(2544351..2545325)
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AA seq
324 aa
AA seq
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MSLTVATVNVNGIRAAAKQRNELNHGILPWLDATPADIVLLQEVRATPEQTEATLAPALA
SGWHLAQAEAAAKGRAGVAVLSRARIDDVQVGFDELPGAEEFGDAGRWIEAKTAGITVAS
VYLPSGAENTAKQDEKYRFLDVLGPYLANRAASGEEMVVGGDWNICHRRADLKNWRPNRK
KSGFLPDERAFMDSLLGTFPDASTQVGDATDAGRNGNPAGGVGDFFGAVDYTPGRVAQAR
VAGGAPGDPQWFDVLRQLHADEEEGPYSWWTWRGKAFDTGAGWRIDYQIASRPLFERAVA
AWVDKAPDYDLRWSDHSPVLVEYN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaccgtcgccaccgtcaacgtcaacgggatccgcgccgccgcgaagcagcgc
aatgaactgaaccacggcatcctcccctggttggacgccaccccggcggacatcgtcctg
ctgcaggaggtccgcgccaccccggaacagaccgaggcgacactcgccccggcactggcg
tccggctggcatctggcgcaggccgaggccgcggcgaagggtcgcgccggcgtcgcggtc
ctctcccgcgcacggatcgacgacgtacaggtcgggttcgatgagctgcccggagccgag
gagttcggggacgccgggcgctggatcgaggcgaagaccgcaggcatcaccgtggcgagc
gtctacctgccctccggtgcggagaacaccgccaagcaggacgagaagtaccgcttcctc
gacgtcctcggcccctacctcgccaaccgtgccgcgagcggggaggagatggtcgtcggc
ggtgactggaacatctgccaccgccgtgccgacctgaagaactggcgtcccaaccggaag
aagtccggcttcctgcccgacgagcgcgcgttcatggactctctgctgggcaccttcccg
gacgcgtcgacgcaggtgggggacgccactgacgcgggacgcaacggcaaccccgccggt
ggggtaggggacttcttcggagcagtggactacacaccgggacgggtggcccaggcccgg
gtggccggcggtgcacccggtgacccgcagtggttcgacgtgctgcgtcagctgcacgcc
gatgaggaggaggggccgtactcctggtggacctggcggggcaaggccttcgacaccggt
gccggctggcgtatcgactaccagatcgcctcccgtccgctgttcgagcgcgccgtcgcg
gcctgggtggacaaggctcccgactacgacctgcggtggagcgaccactccccggtgctg
gtggagtacaactag
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