Charadrius vociferus (killdeer): 104289927
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Entry
104289927 CDS
T08577
Symbol
ABCB1
Name
(RefSeq) multidrug resistance protein 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104289927 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104289927 (ABCB1)
04147 Exosome [BR:
cvf04147
]
104289927 (ABCB1)
04090 CD molecules [BR:
cvf04090
]
104289927 (ABCB1)
Enzymes [BR:
cvf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
104289927 (ABCB1)
Transporters [BR:
cvf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
104289927 (ABCB1)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104289927 (ABCB1)
CD molecules [BR:
cvf04090
]
Proteins
104289927 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
Rad17
RsgA_GTPase
AAA_5
AAA_28
AAA_15
AAA_29
G-alpha
DUF87
AAA_14
AAA_30
AAA_19
nSTAND1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
104289927
NCBI-ProteinID:
XP_009887262
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MRSEDENKQKHTADENSHEITAFSQDHESEGKHKEKKKKPEKPKMVSPFTLFRYSSWSDK
LLMILGTLLAIAHGSSLPIAMIIFGDMTDSFVNFGDTNFTENITAMNSSLDLGKLEEDMT
RYAYYYSAIAAGVLLAAYVQTSFWTLAAGRQIKKIRENFFHAIMRQEIGWFDVNDVGELN
TRLLDDVSKINEGIGDKIGLLVQALTTFITGFIVGLIRGWKLTLVILAVSPVLGLSAAIW
AKVLSAFTDKEQAAYAKAGAVAEEVLAAVRTVIAFGGQEKEIKRYYKNLEDAKRIGIKKA
ITSNISMGAAFLLIYASYALAFWYGTTLVIADDYTIGNVLTVFFSVLIGAFSIGQTAPSI
EAFASARGAAYAIFNIIDNEPQIDSYSETGYKPDHIKGNVEFQNVYFNYPSRPDVEILKG
LNLKISCGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTVTIDGQDIKTLNVRYLREIIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETVVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTV
RNADLIAVFEGGVITEQGNHFKLLERKGIYYKLVNMQAIEAEAPSSEKYENALSVQKSES
EPEYEELREEFRKGLRRRSTRSSMKKPGAQNDDTDEKTSSPDEELPPASFVKIMKLNKTE
WPYFVAGTLCAIINGGLQPAFAIIFSEIIGIFSETDDNILREKSNLYSVLFLVLGIISFF
TFFFQGFTFGKAGEILTMRLRFMAFKAMLRQDMAWFDNSKNSTGALTTRLANDASQVKGA
TGVRLALIAQNIANLGTGIIISLIYGWQLTLLLLAVVPIIAVAGMIEMKMLAGHAKKDKK
ELEAAGKIATEAIENIRTVVGLTRERKFELMYGEHLHVPYRNSVKKAHIFGFCFALSQAM
MFFTYAGCFRFGAYLVVNGHMQYKSVFLVFSAVVFGAMALGQSSSFAPDYAKAKISAAHL
FLLFERVPSIDSYSEEGEKPETFGGSIMIKDAAFNYPNRPEVKILQGLNLKVEKGQTLAL
VGSSGCGKSTVVQLLERFYDPLDGEMLFDGKNAKTLNIQWLRAQIGIVSQEPILFDCTIA
ENIAYGDNSRQVSHQEIVNAAKEANIHSFIESLPDKYNTRVGDKGTQLSGGQKQRIAIAR
ALVRQPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKIAVIQN
GKVIEQGTHQQLLAEKGVYYSLVNVQSGSCNM
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctgaagatgaaaacaagcagaagcatactgcagatgaaaatagtcatgagatc
actgcattcagccaagatcatgaatctgaaggcaaacacaaggaaaagaagaagaaacca
gaaaagcctaagatggtcagcccatttacactgtttcgctactccagttggtcggataaa
ttactaatgatactaggcactctcctggcaatagcccatggaagcagtcttcctattgcg
atgataatttttggtgatatgactgatagctttgttaattttggagacacaaattttaca
gaaaacattacagcaatgaattcctccttagatctcggcaagctggaagaagatatgaca
agatatgcatactactattctgcaatagcagctggtgttcttcttgctgcttatgtgcaa
acttcattttggaccctagcagcaggccggcaaataaaaaaaattagagaaaatttcttt
catgcgattatgagacaggaaattggatggtttgatgtaaatgatgtcggagaacttaac
actcgtcttctagacgatgtctccaagattaatgaaggaataggtgacaaaattggattg
cttgttcaagcactaacaacatttataacaggatttattgttggtctcataagaggatgg
aaattaacccttgtaatactagcagtcagtcctgtactgggactttcagcagccatctgg
gcaaaggttctctctgctttcactgacaaagagcaagctgcatatgcaaaagcaggtgct
gttgcagaggaagttctggcagcagtccgtactgtaatagcttttggaggacaggagaaa
gaaattaaaagatactataaaaatttagaagatgctaaacggattggaataaaaaaggct
attacatctaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactg
gccttctggtatggaactaccttggttatagctgatgattacactattggcaatgttctt
acagtctttttctctgtgttgattggagctttcagtattggtcagactgctccaagtata
gaggcatttgctagtgcaagaggagctgcctatgcgatctttaatatcatagacaatgaa
cctcaaattgacagttattcagagacaggttacaaaccagaccacattaaagggaacgtg
gaattccaaaatgtttacttcaattatccatccagaccagatgttgagatactgaagggc
ttgaatctcaagattagttgtggccagacagtggcgctggttggtggcagtggctgtggg
aaaagtacaactgttcagctcatccagagattttacgatcccaaggaaggcacggtgacc
attgatgggcaggatattaagaccttaaacgtaagatacctgcgggagattattggtgtg
gtgaaccaggagcccgtgctctttgctactaccattgcagaaaatattcgttatggccgt
gaggacgtcaccatggaagagattgaaaaagctaccaaggaagcgaatgcttatgacttc
atcatgaagctacccaataagtttgaaaccgtggttggagaaagaggggcccagctgagt
ggaggccagaagcaaagaatcgcaattgctcgagctctggttcgcaatcctaaaattctt
ctgcttgacgaggcaacgtcagctttggatactgagagtgaatcagttgtgcaggcagca
ctggacaaggcaagagaaggacggaccacagtagtagtagctcatcgactgtcaacagtc
cgaaatgcagatcttatagctgtgttcgaaggcggagttatcacagaacaagggaatcat
tttaaattgcttgagagaaagggaatctactacaaacttgttaacatgcaggcaatagaa
gctgaagctccatcatcagaaaaatatgagaatgcacttagtgtccaaaaaagtgaatct
gaaccagaatatgaagaattgagagaagaattcaggaaaggattgagaagacgatcaact
cggagcagcatgaaaaagccgggagcacaaaatgatgatactgatgagaaaactagttca
cctgatgaagagttacctccagcttcatttgtgaaaattatgaagttgaacaaaactgaa
tggccatactttgtagctggaactttatgtgcaattatcaatggaggtttacaacctgca
tttgcaatcatattttcagaaattatagggattttttcagaaactgatgacaacatttta
agagaaaagagcaacttatattcagtgctgtttttagtacttgggatcatttcctttttt
actttcttttttcagggtttcacatttggcaaagctggagaaattcttacaatgaggctt
cgattcatggcatttaaagcaatgcttagacaggacatggcctggtttgataattctaaa
aatagcactggagcattaactacaagacttgctaatgatgcctcacaagtgaaaggagca
actggtgtcagactggcattaattgctcaaaatatagctaacctgggaactggaattatt
atatcattaatttatggctggcagctgaccctcctacttttagctgttgtgccaatcatt
gcagtggcaggaatgattgaaatgaagatgttggctgggcatgctaaaaaagataaaaaa
gagctggaggctgcaggaaagattgccacagaggccatagaaaatattagaactgttgtt
ggtctgacccgagaaagaaaatttgagttgatgtatggagaacatttgcatgtaccctac
agaaattctgtgaagaaggcacatatatttggattttgttttgccctttcacaagcaatg
atgttctttacctacgccggctgtttccggtttggtgcatatctagtggtaaacggacac
atgcagtataaaagtgtgtttttagtgttttcagctgtggtatttggtgcaatggcatta
ggacaaagcagttcttttgctccagactacgccaaagccaagatatcggcagcccacttg
tttctgctgtttgaaagggtaccctcaatagatagttacagtgaggaaggagagaagcct
gaaacatttggaggaagcataatgatcaaagatgcagcatttaactacccaaaccgacca
gaggtcaaaatcctccagggtttgaatctgaaagtagaaaagggacaaaccctggctctt
gttggtagcagtggctgtggaaagagtactgttgttcagctgctggagagattttatgat
ccacttgatggagaaatgctttttgatggcaaaaatgcaaagactctaaatatccagtgg
ctgagagctcagattggtatcgtctcacaagaaccaatcctgtttgactgcactattgct
gaaaacatcgcatatggagataacagtcggcaggtgtcacatcaggaaattgttaatgca
gcaaaagaagccaacattcattccttcattgagtctctgccagataaatacaatacccgc
gtaggagacaagggaactcagctttctggtggtcagaaacaacgtattgctattgcccga
gctcttgtacgtcagcctcaaattctgctactggatgaagctacgtctgccttagataca
gaaagtgaaaagattgtccaggaagcactggataaagccagagaaggtcgcacctgcatt
gtgatagctcaccgcctctccaccatccaaaatgctgacaagattgccgtgatccagaat
ggcaaggtcatagagcaagggacccatcaacagctcctggctgaaaaaggcgtctactat
tctctggtcaatgttcaaagtggatcatgcaacatgtaa
DBGET
integrated database retrieval system
