Charadrius vociferus (killdeer): 104291661
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Entry
104291661 CDS
T08577
Symbol
ATM
Name
(RefSeq) LOW QUALITY PROTEIN: serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03440
Homologous recombination
cvf04068
FoxO signaling pathway
cvf04110
Cell cycle
cvf04115
p53 signaling pathway
cvf04210
Apoptosis
cvf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104291661 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104291661 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104291661 (ATM)
04210 Apoptosis
104291661 (ATM)
04115 p53 signaling pathway
104291661 (ATM)
04218 Cellular senescence
104291661 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvf01001
]
104291661 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104291661 (ATM)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104291661 (ATM)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104291661 (ATM)
Enzymes [BR:
cvf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104291661 (ATM)
Protein kinases [BR:
cvf01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104291661 (ATM)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104291661 (ATM)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
104291661 (ATM)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
Check point factors
Other check point factors
104291661 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
TTI1
Motif
Other DBs
NCBI-GeneID:
104291661
NCBI-ProteinID:
XP_009889225
LinkDB
All DBs
Position
Unknown
AA seq
3049 aa
AA seq
DB search
MSLALHDLLICCRRLENEKATERRKEIENFKRLLRDSETVLQLDRNSDSKQGKQLNWDAV
FSVLQKYFQKEMKNLQLTKPNVSASTQTTRQKKMQEVGSLVKYFIRCANKRGPRLKCQEL
LTYVMEIVRDPTSCAAYGSDCSSILLKDILSVRKYWCEISQQQWSELLILYGQLYLRPSG
KINRVLVARIIHTLMRGYCFQTDGLSSDMFMFFTKAMQCARQEKNTAGLDHIVGAMNIFC
NKFAVNCRIRICKIGEEILPTVLYIWTQYRPKDSLKESIIELFRLQVHVHHPKGAKTQGK
GAYDSTKWQSILHNLYDLLVNEINHISSRGKYSSGSRNIAVKENLIELMADICHQVFTED
TKVLEITQPYTISQREPSDETVSSKRRRIELGWELIRDNLQRSQKDFDVIPWLQITTQLI
SKYPMSLPNSELPPLLSVLHQLLPQQRRGERTPYVLKCLTEVALCQNQKTDLKSSHKLEL
QRTWAKIWSLTIRSVSFQQIEVESFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSALC
CLALVMSAYSVPKNLDVGMEQNNCERNLDSVLKEAIIKWVLSSYFEEEMEECAELPPVLC
SDFPHLVLQKILVSLTMKNCRAAMSFFQNDAKCMQHLQGKEENNFSDVEELYLQTTFDEM
DIFTNFAVNVADKNATGSRLAINQNLRETLEYCLLAMSEKLLSSYAPKVVAPEHLVRCVS
LLIGVLGCYCYTGIFKEEEACKSKLFQNAKSLFHYAGESVSQSKNKLSDDTQINSLRTLI
MQCTKCLCNCAKNSANKMLSNIFLHLLTSKFMNDLVDICKNLMTFAGKPSELGEADLMGN
DPEESIMEVDNQVSDDLFDDHSVTDISDTSESGEMQNVTGALSPLAEEQLTKQDLLLLEI
LRFLCICVTTVQIQTVSFRAFDIRRKLLMLTDGSVFDTVKPLHLHMYLVLLKELPIEENL
LPEDDVLMLLRPLSDVCSLYRRDQEVCKVILNNLLPIAVGLAQSNPHAEKTRDAQGQFLT
VVGAFWHLAQGGKCTAPVRVALLNCMKALLEADPHCKWAILNVVNEDLPVSDAFPHFLAD
SHHQVRILAAKSITSLFQDVKQRDSSGMSKPLPLKLQQTAFENAYLRVQEGMRNLGRGPE
DLLDKQCNGKAVLLMLITMVLCCSPVCEKQALFAICQSVKENGLDPQLVKKVLKKIADIF
GYKSIEDFMTSHLDYLVIEWLKINDSGYSLSAFPYVLLNYTSLEEFYRSCYKVLVPHLVI
RSQFEDVKSLANKIEKDWRQVLADCFPKILVNILPYFAYQSHGESEVTEQRDTASKVYDM
LKDENCLGKQQIDNLSHNNLPEIVVELLMTFHEPPDTTVEGAHPSKYIRELDPAPNPPHF
PSYVIQATLDYISNCHKSKLKSLVAVLSKNPDSFQKILLALCKHASDTNNIYKKHRVLII
YHLFVSLLLKEIKDGLGGAWAFVLRDIIYTLIHHINSRPVIIRDISMRSFSLCCDLLHHV
CHTAVMCCDDALESHLHVIVGTLIPLAVDQPEIQEQVLGLLKYLVIDNKDNENLYQAIKC
LDPFPEYPAFKDLRATQQKIKYSKGPYSLLEEINHFLSVGVCDSLPLTRLEGLYDLRKQL
EQYKDQMKDLLKNSQEKPEDSVVVKLVVSLLQLSKMAVNHTGEKAVLEAVGSCLGEIGPM
DFSTIALQRAENALDSKAVDLLEDRKLQWVFIMLTQINTALTDNCIDVRAAAVSCLKNIL
ATKSGSEFWEVYKSKADPMLIYLQPFRMARKKFFVVPANDTEAPLETLDDTNLWIPLGES
HETWIKRLTSSILDSGGVQNEVLQLMKPLCEVKTDLCQTLLPYLIHDILLHDSDESWRNL
LSLHIQKFFTACCRFASSSRSTTPPNSDSEQETHNFRSLDKVSRRAMLAVVDYLRRQKRS
VSGTVFDDSFWLDLNYLEVAIAAQSCAAHFTALLYAEIYADKINIDKQQESLTFEEESQR
TTITILNEKSKEETGISLQDLLMDIYRSIGEPDSLYGCGGGRMLQPLARIRTYEHEAVWE
KALVTYDLETSLSPSTRQAGIIEALQNFGLCXFLKGLENENTEWCAELQEIRYQAAWRNM
QWGHISSVKDETGRPGYHESLYDALQSLRDKDFSAFYDSLKDARVNEVEELCKGSLESVY
SLYPTLCRLQLIGELENIGLLFSRSVTTQQLNDTYLKWQRQSQLLKDSDFHFQEPIMALR
TVILEILLEKENENTKRECIKDILTKHLVDLSRLARTAKNTQLPERAMFQIKQHNPMGYG
ISEWQLEEAQVFWAKKEESLALNILKRMIKKLDADWFQNDPRLKLMYTECLRLCGTWLAE
TCLENPTVIMQKYLEKAVEIAASHSGDSSDELKKGKMKAFLSLARFSDNQYQRIENYMKS
SEFENKQALLKKAKEEVGLIRERKVQTNRYTVKVQRELELDECAIHALTEDRKRFLCKAV
ENYISCLLSGEEHDMWIFRLCSLWLENSGVDKVNEMMKKNAEKIPSYKFLPLMYQLAARM
GTKMMGGLGFHEVLNNLLCRISLDHPHHSLFIILALANANKDDLLSKPDAIRRNKLIKNA
PKEISQLDVDRMKAASNIINIMRKRRAHMVRDVEALCDAYITLANLDASPWKSQRKGISI
PADQPINKLKNLEDVVVPTMEIKVDPTGRYENLVTIRSFKPEFRLAGGLNLPKIIDCVGS
DGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKRKLTIRRYKVVPLSQRSGVL
EWCSGTTPIGEFLVNVEEGAHKRYRPKDYSGHECQKIMMDAQKKHFEEKYTIFMKVCENF
QPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGLGDRHVQNILIDEQTAELVH
IDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTMAVMRNSQEALLT
IVEVLLYDPLFDWTMNPLKALYLQQRPEDEADMSSSLNTDPQECKRKASSDDQSFNKVAE
RVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLFPGWKAWV
NT seq
9150 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcattacatgatctgctcatttgttgtcgtcgccttgaaaatgagaaagct
acggagcgaaggaaggaaattgaaaatttcaagcgacttctccgtgattctgaaacagtt
ctccagctggaccggaattctgattctaaacaaggaaagcaactcaactgggatgctgta
tttagtgtcttgcagaaatatttccaaaaagaaatgaaaaacctgcagctgacaaaacca
aatgtgtctgcttcaacccaaactaccagacagaaaaagatgcaagaagttggaagtttg
gtcaaatatttcatcagatgtgctaataaaagaggacccagactgaaatgtcaggaactt
ctgacttacgtcatggaaattgtaagagatccaacaagttgtgctgcttatgggtctgac
tgtagtagtatactcctaaaagatatcctctcagtaaggaaatattggtgtgagatatcc
cagcagcagtggtcagagttgctgattctgtatggccaattatacctcagaccatctggg
aagataaatagagtcttggtggctaggataattcacacgcttatgagagggtactgcttc
caaactgatgggttgagttccgatatgtttatgttctttacaaaagcaatgcagtgtgca
aggcaggagaagaatactgcgggcctggatcatattgttggagcaatgaatatcttctgc
aataagtttgctgttaactgtcgcatacggatttgtaaaataggggaagaaattttgcct
acagtgctttatatatggactcagtatagaccaaaggattccctgaaggaatcaataatt
gagttatttcgtctccaagttcatgttcatcatccaaagggtgcaaaaactcaaggaaaa
ggtgcatatgactcaacaaaatggcaaagtatcttacataacctatatgacctgctggtg
aatgaaataaatcacatcagtagtagaggaaagtattcttcaggctcacgtaatattgct
gtaaaggaaaatttgattgagttaatggctgatatttgtcatcaggtttttacagaggat
accaaagttctggaaattacccagccgtataccatttcccaaagagagcccagtgatgaa
acagtatcaagcaagcgcaggaggattgaactaggctgggaactaattcgagacaacctg
cagagatcacagaaggactttgatgtcataccttggttacagattacaactcagttaata
tcaaagtatcccatgagtcttcctaacagtgagctgcctcccttactcagtgtgcttcac
cagttactgcctcagcagcgccgaggagaaaggaccccatatgtactgaagtgtcttaca
gaggtagctttgtgtcaaaaccagaaaaccgatttgaagagcagccacaaattggagctc
cagagaacctgggcaaagatttggtcacttactattcgtagcgtaagtttccagcaaatt
gaagtagagagctttgggctactcggagctatgatccaaggaaaccttgttgtaacagat
aaagaactctggaagatattttcaggacctgcatgcaagccttcaagttctgctctatgt
tgtttagcattagtgatgtctgcctattcagtgccaaaaaatttggatgtaggaatggaa
cagaataattgtgaaagaaatctggattctgtgttaaaggaggcaataattaaatgggta
ctgtcctcctatttcgaggaagaaatggaagaatgtgctgagttgcctcctgtgctctgc
agtgattttccacatcttgtattacaaaaaattcttgtgagccttacaatgaagaactgt
agagctgccatgagtttcttccaaaatgatgctaaatgtatgcaacacttgcaagggaaa
gaagaaaacaatttttctgatgttgaagagctgtatctgcagacaacatttgatgaaatg
gatattttcactaactttgcagtaaatgttgcagataaaaatgcaactggttcaagactt
gccatcaaccaaaatcttagggaaacactggagtactgtcttctagcaatgtcagaaaag
cttttaagcagctatgctcctaaggttgttgctccagaacaccttgtccgatgtgtcagt
ctcttgattggtgttcttggttgctattgctacactggaatatttaaagaagaggaagcc
tgtaaatcaaagttgttccagaacgcaaagtctctctttcattatgctggagaaagcgtt
tctcagtctaaaaacaaactaagtgacgatacccagatcaactcactgaggactttgata
atgcagtgtacaaaatgtttatgcaattgtgccaagaacagtgctaataagatgttgtct
aatatattcctgcatttgttaacatcaaaatttatgaacgatcttgtagatatttgcaaa
aatctgatgacatttgctggaaaaccaagtgagctgggagaagcggatctaatggggaat
gatcctgaggagagtataatggaagtagataaccaggtatctgatgatctatttgatgat
cattcagtgactgacatcagtgatacaagtgaatctggtgagatgcaaaatgtaacaggt
gctttgagcccattagctgaagaacagttgacaaagcaggatttgcttctccttgaaatt
ctgaggttcttgtgtatttgtgtaactacagtccaaattcagacagtgagcttccgagcc
tttgatatacggaggaagctgttgatgcttactgatggcagtgtctttgataccgtgaag
ccgttgcatctgcacatgtacttggtccttttgaaggagctccctattgaagaaaacctc
ttgcctgaagacgatgttcttatgcttcttaggcctctttctgatgtgtgttcgttgtac
cgtcgagatcaagaagtttgtaaagtaattctaaacaatttgcttcctatagcagtaggg
ttggcccagtccaatccacatgctgaaaagacaagggatgcccaaggacaatttttgaca
gttgttggagctttttggcatttagctcaaggagggaaatgcacagcaccagtcagagtg
gcccttttaaactgcatgaaagccctgcttgaggctgatcctcattgtaagtgggcgatc
ctgaacgtggtaaatgaagatctacctgtgagtgatgctttcccacattttctcgcagat
agtcaccatcaagttcgcattcttgctgcaaagtcaattaccagtttgtttcaggatgtg
aaacagagagattcttctggaatgtcaaaacctcttcccttgaagctccaacaaacggct
tttgaaaatgcgtatctcagagttcaggaaggaatgagaaatctgggcaggggtcctgaa
gaccttttggacaaacagtgtaatggaaaagcggttttgctgatgcttataaccatggtt
ctgtgctgcagtccggtctgtgaaaagcaagctttgtttgctatttgccagtctgtgaaa
gagaatggattagatcctcagcttgtgaaaaaggttttgaaaaaaatagctgacattttc
ggctataaaagtatagaagacttcatgacatcacatttggactatttggtgatagagtgg
ctgaaaataaatgacagtggatatagcctgtctgcttttccttacgttcttctgaactat
actagccttgaggagttctacaggtcttgttataaagttttggttccacacctggtgata
agaagtcaatttgaagatgtgaaatcacttgccaacaagattgaaaaagactggaggcag
gttctagcagactgttttccaaagatacttgtgaatatcctcccgtattttgcctatcaa
agccatggagagagtgaagtaacagagcaaagagatacagcgtctaaagtctatgacatg
cttaaggatgaaaactgcttaggaaaacagcaaattgacaatttatcgcataataactta
ccggagattgtggttgaactgttgatgactttccatgaaccacctgataccacagtagaa
ggagctcatccaagtaaatatataagggaactggatcctgctcctaatcctcctcatttt
ccatcttatgtgattcaggcaaccttggactatattagcaactgtcataaaagcaaatta
aaaagtcttgtagcagttctttctaaaaaccctgattcattccagaaaatccttctagcc
ctttgtaagcatgcatcagatacaaacaacatttacaagaaacacagagttcttataatt
tatcacttgtttgttagtctgttacttaaagagataaaagatggtttaggaggagcatgg
gcttttgtcctccgagatataatttacaccctgattcaccacatcaatagcagacctgtt
attatcagagacatatccatgcgcagcttttcactctgttgtgatcttcttcatcatgtt
tgccacactgcagttatgtgttgcgatgatgctctagagagccaccttcatgttattgta
ggaaccctaatacctcttgctgtggaccagcctgagattcaggaacaggttctcggcttg
ttgaagtatctggtgatagataataaggataatgaaaatctgtaccaagcaatcaaatgc
ttagatccttttcctgaatatcctgcttttaaagatttgcgagcaactcaacagaaaata
aaatacagtaaaggaccatattctcttttggaggaaattaatcactttctctcagttggt
gtttgtgattcactgcccttaacacgtcttgaagggctgtatgatttacgcaaacaactg
gaacaatataaagatcagatgaaggatctcctgaaaaattcccaggaaaagccagaagat
tctgtagtagtgaaattggtggtgagcttactgcagctgtccaagatggcagttaaccat
acaggtgaaaaagccgtgctggaggctgttggaagttgcttgggagaaataggtcccatg
gatttctccaccatagctcttcagcgtgctgaaaatgcactggattctaaagcagtggac
ttacttgaagatagaaagcttcagtgggtcttcataatgttaactcaaataaatactgct
ttgacagacaattgtattgatgttagagctgctgctgtttcctgtttgaaaaacatacta
gccaccaagtctggcagtgaattttgggaagtttataaaagtaaagctgatcccatgtta
atctatctacagccttttagaatggctaggaaaaagttttttgtagtacctgctaatgat
acagaggctcctttagagactttggatgacacaaacctgtggattcctctgggagaaagt
catgagacctggatcaagcgtctaactagttcaatactggacagtggaggtgtgcagaat
gaagttctccagttaatgaagccgctgtgtgaggtgaaaacagacttgtgtcaaactttg
cttccatacctgattcatgatatccttcttcatgactcagatgaatcttggagaaatctt
ttgtcacttcacatccagaagttttttacagcctgttgcagatttgcctcatctagtaga
tctactacacctccaaattctgattcagagcaagaaacccataattttagaagtttggat
aaagtatctcgacgagccatgcttgctgttgttgattacttaagaagacaaaagagatct
gtttcaggtacagtttttgatgacagcttctggctagatctgaattatcttgaggttgct
atagcagcacagtcttgtgctgctcacttcacagccttgctctacgcagaaatctacgca
gacaagataaatatagacaaacagcaagaaagtttgacatttgaagaagaaagtcaaaga
acaactattactattttgaatgaaaaaagtaaagaagaaactggcataagtttacaggac
cttctcatggacatatatagaagcattggagaacctgacagtctctatggctgcggtgga
ggaagaatgttacagccattagcacggatcagaacatatgagcatgaagcagtatgggag
aaagccctcgtaacatatgaccttgagacaagcctctctccatctactcgccaggcagga
ataatagaggctctgcaaaattttgggctttgtntgtttttaaaaggactggaaaatgaa
aacactgagtggtgtgcggaactacaggaaatacgctaccaggcagcatggaggaatatg
cagtggggccacatctcttctgtcaaagatgagacaggaagaccagggtaccatgaatca
ttgtatgatgctcttcagtctttacgagataaggatttctctgctttctatgacagtctt
aaagatgccagagtgaatgaagtagaagagctgtgcaaaggcagccttgagtctgtttat
tcattatatccaactctttgcagactacagctaatcggagagttggaaaatataggtctg
ctgttctccagatctgttactactcaacaactgaatgatacttatttgaaatggcagaga
cagtcccagcttctcaaggacagtgacttccatttccaggaacctatcatggctctgcgc
actgtaattttggagatattgcttgaaaaggagaatgaaaataccaaaagagaatgtatt
aaagacatcctgaccaaacatctagtggatctctctagattggcaagaactgctaaaaat
acacagcttccagaaagagctatgtttcagatcaaacaacacaacccaatgggatatgga
atttctgaatggcaactagaagaagctcaggttttctgggctaaaaaggaagagagtctt
gcactgaatattcttaaaaggatgataaaaaaattagatgcagattggtttcagaatgat
cctcgtctgaaattgatgtatacagagtgtttgaggctatgtggaacctggttagcagaa
acgtgcttggaaaatcctacagtcatcatgcagaaatacttagaaaaggctgtggaaatt
gctgcaagccacagtggagacagcagtgatgagctgaagaaaggaaagatgaaggctttc
ctgtctttggctcgtttctcagataatcagtaccagcgaattgagaattacatgaaatcc
tcagagtttgaaaataagcaggcgttactgaagaaggccaaggaggaggtcggcctcatc
agggagcgtaaagttcagacaaatagatacacagtgaaggttcagcgagaacttgaactg
gatgaatgtgccatacatgccctaactgaggatcgtaaacgtttcttgtgtaaagcagtg
gagaactatatcagctgtttactaagtggagaagaacatgatatgtggatctttcgactc
tgttccctatggcttgaaaattctggagtcgataaagtcaatgaaatgatgaagaaaaat
gcagagaagatcccttcatacaagtttttgcctctgatgtaccagctggctgctcggatg
ggaaccaagatgatgggtggtttaggatttcatgaagttctgaataatctattgtgtaga
atttcactggatcatccacatcatagtttgtttataatactagctttggcaaatgctaac
aaagatgatctcctctcaaaaccagatgcaataagaagaaataagttaattaaaaatgca
ccgaaagaaatctcccagcttgatgtggatagaatgaaggctgctagcaatataatcaat
atcatgagaaaaaggagagctcatatggttagagacgttgaagcactttgtgatgcttac
atcacattagcaaatctagatgctagtccatggaaatctcaaagaaaaggaataagtatt
ccagctgaccagccaattaataaactgaagaacttggaggatgttgttgttcccaccatg
gaaattaaggtggatcccacaggacgatatgaaaacttggtgacaataaggtcttttaag
ccagaatttcgcttagcaggaggcctgaatctgcctaaaataatagattgtgtaggatca
gatggtaaagaaaggaggcagctggttaagggacgtgatgacctgagacaagatgctgtt
atgcaacaggttttccagatgtgcaatacattgctccagcaaaacactgaaacacgaaag
agaaaattaactatccgcagatacaaggtggttcccctttctcagagaagtggtgttctt
gagtggtgctcaggaacaactcccattggggagttccttgtgaatgtcgaggagggagct
cacaagagatacaggccaaaagattactccggtcacgagtgtcagaaaatcatgatggat
gcacaaaagaaacattttgaagagaaatacaccatcttcatgaaagtctgtgagaatttt
caacctgtgtttcgttatttctgcatggaaaaattcctggatccagcagtgtggtttgaa
aaacggttggcgtacactcgcagtgtggctacatcttctatagttggctacattcttgga
cttggagacagacacgttcagaatatcttgatagatgaacaaactgcagaactagtgcat
atagatctgggggttgcttttgagcaaggtaaaatccttcccacaccggagactgttcca
tttagattaaccagggacattgtggacggaatgggtattactggggtggaaggagtcttc
agaagatgctgtgagaaaacaatggctgtcatgagaaattctcaagaagctttgctgact
attgtagaggtgctgctatatgatccgctttttgactggaccatgaaccccttgaaagct
ttgtatctgcagcagagaccagaggatgaggctgacatgagctcttccctcaatactgat
ccacaagaatgtaaaagaaaagccagcagtgatgaccagagttttaacaaagtggctgag
cgtgttctgatgagacttcaggagaagctgaagggtgttgaggagggaacagtgctcagt
gtgggagggcaggtgaacctcctcatacagcaggccatggaccctaaaaatctgagccga
ctctttcctgggtggaaagcttgggtgtga
DBGET
integrated database retrieval system
