Charadrius vociferus (killdeer): 104293170
Help
Entry
104293170 CDS
T08577
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvf01002
]
104293170 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104293170 (USP47)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104293170 (USP47)
Peptidases and inhibitors [BR:
cvf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104293170 (USP47)
Ubiquitin system [BR:
cvf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104293170 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104293170
NCBI-ProteinID:
XP_009890950
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTPLKRLF
EDVASKVGYVNGTFDLVWGNGDNVTDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQ
PHIMPEESSTTDDSAQDRFIGPLPREGSVGCTNDYVSQSYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVMSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVAPPISI
RAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFI
ESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAVYQKSSGDAGNLDE
ACERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTEASDFENIESPLNE
IDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNV
DNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYF
KSEPYAADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFES
VRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQ
SKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILD
GVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSETSGIPLENIEFAK
GRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNE
LMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacaaagtatctttgctgaaatgaagaagaaattttcacaggtg
gaaagtgctgctgaggaacccagggtgctgtgtataatacaagataccacaaattccaag
acagtgaatgagcgcgttaccttgaacctgccagcttccacaccacttaaaaggctgttt
gaagatgtggcttcaaaagtgggctacgtgaacggaacttttgatttggtgtggggaaat
ggagataatgtaactgatacgactccaatagatcagaacagtgacaaaactattcttgat
gctgggtttgagccagggaagaagaactttctgcatttgacagacaaagatggtgagcag
cctcatataatgccggaggagtccagtacaacagatgacagtgcgcaagacagatttata
ggccctcttccacgagaaggctctgttggctgtaccaatgactatgtcagtcaaagctac
tcttattcttcagtcctgagcaaatcggagacaggttatgtggggctagtaaatcaagca
atgacttgctacttgaacagccttctgcaaacactgttcatgactcctgaatttagaaat
gcattatataaatgggaatttgaagaatctgaagaggatcctgtgatgagtatcccctac
cagcttcaaagactgtttgttttactgcagaccagcaaaaaaagagcaattgaaacaaca
gatgttacccggagttttggatgggatagtagcgaggcatggcagcaacatgatgtacag
gagctttgtagagtcatgtttgatgctttggagcagaagtggaagcaaacagaacaggct
gatcttataaatcaactgtatcaaggcaaactgaaggactacgtaagatgtctagaatgt
ggctatgaaggctggagaatcgacacgtacctggatattcctttggtcatccggccgtat
ggctccaaccaggcgtttgctagcgtggaagaagcgctgcacgctttcattcagcctgag
attcttgatggccccaatcagtatttttgtgaacggtgtaagaagaaatgtgatgcaagg
aagggtctgcggttcttgcattttccttatctgctgacattacagctgaagagatttgac
ttcgattataccactatgcacagaattaaactcaatgatcgtatgacttttcccgaggag
ttagacatgagtgtcttcattgatgttgaagatgagaagtctcctcaaactgagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttt
tctaatgatgatggagttgatgaaggaatctgccttgaaagcaatagtgcagcagaaaga
atttctaaagctggcagtgaaaagagttctttactgtatgagctcttttctgttatggtt
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagtgatgat
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatatggtggatcctccggaagcagaggttattactccagtgcttttgctagctctaca
aatgcatacatgctgatatatagactgaaggatccaaccagaaatgcaaagtttcttgag
gcacatgagtatccagagcatattaaacaattggtacagaaagagagagaattggaagaa
caagaaaagaggcaacgtgaaattgagcgcaacacttgcaagattaaattgttctgtatg
catcctacaaagcaaataatgatggaaaacaaattagaggttcataaggacaggacattg
aaggaagctgtggaaatagcttacaagctaatggatttagaagaggctgttcctttggat
tgctgtcgtcttgtcaaatacgatgagttccatgactacttggaacgatcttatgaagga
gaagaggatacaccaatgggtttattacttggaggtgtaaaatcaacatacatgtttgac
ttactgttggaaacaagacgacctgaccaaattttccagtgctacaaacctggtgaggtc
atggtgaaggttcacgtagttgacctaaagactgaatctgttgctcctccaataagcata
cgagcttatttgaatcaaacagtttcagaatttaaacagctaatttcaaaggctacacac
ctgcccgctgaaacaatgcgggtagtattagaacgttgctacaatgacttgcgtcttctg
aacgtttccagcaaaacactgaaagccgaaggcttttttagaagcaacaaggtatttatt
gaaagctcagagtctttagatcgtcatgtggcatatacagattctcatttgtggaaactt
ttggatcgtcacgcaaatacaatcagactatatgtttcattaccagagcaatcacctgga
tctcagtttagacgagcagtttatcagaagtctagtggagatgcaggcaacttggatgaa
gcctgtgaaagagtaaaaggacctgtaggtaatatgaaatctgtagaggcaattcttgaa
gaaagcactgaaaagcttaaaagcttgtccctacagcagcagcaggagggcgataatgga
gacagcagcaaaagcacggaagccagtgattttgaaaacattgaatcacctttaaatgaa
atagactcttcagcatcagcagaaaacagagaacttgaaaaccaaattcagatttctgat
ccagaaaatctccagtctgaggaacggtcggattcggatgtaaataacgacaggagtaca
agttcagtggacagtgatatcctcagctccagtcatagcagtgatactttatgcaacgtg
gacaatgccccgcttcccctggctaacggacttgattctcatagtatcacaagtagtagg
cgatcaaaagcaaatcaggggaagaaagaaacctgggacacagcagaagaagattctggg
acagatagtgaatacgatgaaagtggcaagagcagaggagaagcacaatatatgtacttt
aagtcagaaccctatgctgcagatgaaggttcaggagaagggcaaaaatggctgatggtg
catgttgataaaagaattacactgtctgccttcaagcaacatttggagccttttgttgga
gttccatcttctcacttcaaagtctttagagtctatgccagcaatcaagagtttgagagc
gttcggctgaatgagacactttcgtcattttctgatgacaataagataactattagactt
ggaagagcccttaagaagggtgaatacagagtcaaggtctatcaacttttggtaaatgag
ccagagccatgcaagtttcttctagatgcagtttttgctaaaggaatgactgtccgacag
tcaaaagaggagctgcttcctcagcttcgagaacaatgtggcctagacttgacaattgac
aggtttcgcctacgaaagaaaacctggaagaacccaggcactgtgtttctggattatcat
atctatgaagaagatatcaatatttcaagcaattgggaggtcttcttagaaatacttgat
ggagtagaaaagatgaaatccatgtcacaacttgctgttttatcgagacgatggaggcca
tcagagatgaaactagattctttccaggaagtagtactagaaagcagcagtgttgaagaa
ctaaaagagaagcttagtgaaacaagtggaatacccttagaaaacatagaatttgcaaag
ggtagaggaacgtttccatgcgacatctccatactagagattcaccaagacttggactgg
aatcctaaagtatctacattgaatgtctggcctctgtacatttgtgatgatggtgcagta
atattttatagggataaaactgaagaattaatggaattaacagatgagcagagaaatgaa
ctgatgaaaaaagaaagcagcaggctccagaagactggacaccgggtaacctactctcct
cgtaaagaaaaagcactaaaaatttatctggacggagcaccaaataaagatttgactcaa
gactga
DBGET
integrated database retrieval system
