Cyprinodon variegatus (sheepshead minnow): 107083433
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Entry
107083433 CDS
T06110
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
107083433
NCBI-ProteinID:
XP_015228135
Ensembl:
ENSCVAG00000021695
UniProt:
A0A3Q2DGP6
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSSLGKEKDLKEKDPKGGLAGKERDKEAKTLSSLVKDGGKETKTKGKDTKEGKKDTSSS
TPGVAFSVDNTIKRPNPAPTTRKKSSNAEVIKELNKCREENSTRLDLSKRSIHMLPTAIK
ELTQLSELYLYSNKLQSLPAEVGCLSSLVTLALSENSLTSLPDSLDSLKMLKMLDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
KSLAKCRELEELNLENNNISVLPEGLLSSLLNLTSLTLARNCFQSYPVGGPSQFSTIYTL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLNKIPED
ICGLISLEVLILSNNLLKKLPHGIGSLRKLRELDLEENKLECLPHEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttccttaggtaaagaaaaagatttaaaagaaaaggaccctaaaggtggtcta
gcaggtaaagaaagggacaaagaggccaagactttatccagcctagtcaaagatggtggc
aaagaaacaaagaccaaagggaaagacacaaaggaaggaaagaaggacacaagcagctca
acaccaggtgttgccttttctgttgacaacacgataaagcggccaaacccagcaccaacc
acacgcaagaaatccagtaatgcagaggtcatcaaagagcttaataagtgtcgggaagag
aactcgaccagactggacctatccaaacggtccattcacatgctgcccactgctattaag
gagttgactcagttgtcagaactctatttatacagcaacaagctacagagcctaccagct
gaggtgggctgcctgtcaagcctggtcactttagccctcagcgagaactccttaaccagt
ttgccagattccttggattccctgaagatgcttaaaatgcttgatctccggcacaacaag
ctcagagagatacctcctgtggtctaccggctgacgtctctgaccacactgtacctgcgc
ttcaatcgcatcaccacagtggagaaggacatccgaaatctttccaagctcaccatgctc
agcatccgggagaacaagattaaacagctaccagcagaaataggggagctatgcagcctc
attactctggatgttgcccataatcagttggaacatctaccaaaggagatcggaaattgc
acacaaataaccaaccttgacctgcagcacaacgagctcttggacctcccagagactata
ggaaatttggcaagtataaatcgattaggactgcgatataaccgattgtcagccatcccc
aagtcgttagccaaatgtcgagaacttgaggaactaaaccttgaaaacaacaacatttca
gtattgccagagggcctgctgtccagtttgctaaatttgaccagtctgacgctggccagg
aactgcttccagtcttaccctgtgggtgggccctcccagttctccactatttacacgctc
aacatggagcacaaccgcatcaacaagatcccgtttggtatcttctccagggccaaagtg
ttaagcaagctcaacatgaaggacaaccagttaacagctttgccgttggattttggcaca
tggactagcatggttgaacttaacctggccactaatcagctgaataaaatcccagaagac
atctgtggacttatctctctagaggtattaatactgtccaataatcttctgaagaagcta
ccgcatggtattggaagtttgagaaagttacgagaactcgacctggaggaaaacaaatta
gaatgtctaccgcatgaaatcgcttaccttaaagatttacagaaattggtgttgaccaat
aatcagctgactacgttaccaagaggcatcggccacctcaccaacctgactcaccttgga
ttgggagagaacctgctgcaacaccttcctgaggagatcggcacactggagaatctggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgtttgagctggccctttgc
agcaagctgtccatcatgagcatcgagaactgtcccctcacccacctgccggcccagatc
gttgcaggtggcccgtctttcatcatccagttccttaagatgcagggaccttaccgtgcc
atggtctga
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