Cyprinodon variegatus (sheepshead minnow): 107086689
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Entry
107086689 CDS
T06110
Symbol
nid2
Name
(RefSeq) nidogen-2
KO
K06826
nidogen (entactin)
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107086689 (nid2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107086689 (nid2)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
107086689 (nid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Thyroglobulin_1
G2F
NIDO
EGF_3
Ldl_recept_b
EGF_CA
EGF
cEGF
SGL
hEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
107086689
NCBI-ProteinID:
XP_015233290
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MDRGAMLTAALLCCWSCSVYLVTAIRRTDLFPYGTLHGDAILPEGDDETSRALTLPRPLY
FFDSSFSQLYVATNGIISAQDLPMEQQYVDDGLPTDFPVVAPFLADIDTSGGRGHIYYRV
TGTPGILNRVTQEVNRGFPDAKFTPTHAVVATWENVAAYEDQARAAGPSNKVNTFQAVIG
YDETDSYVLFLYPEDGLTFFGTRPKESYNVEIELPARVGFSRGEVSYFIISKTDGPFYSV
TQDEDSVKRLSQVGNTGIAGVWLFHTGRRYFFQDIIPASTGGLLVIPPTVGYSPYLDTTT
PEYEFEDYTFEPETEEEEGSQTLTGRDPEYQPDPRGSDHSDSLQPGGFAPPPHSEDSDRQ
ISYKREDVPLPLEPVERQYGAPRVGVQEGRVQEQQPQLNLDVVDLFPPLTSKVALSPGGH
VVSVDEDDVDFDTGVIQYTTENKETCARFQRQCSQNAFCSDYPTGFCCHCQTGFYGNGRQ
CLPDGAPQPVSGKVSGTVTVGSTPFELNNIDLHAYIVVGDGRAYTAISEVPESLGWPMMS
VSPIGELFGWLFALELPNSQAGFKITGAEFSRHAEVLFNPGNQRLSIIQTGRGLDEHNHL
SVDTAINGNVPYIPPGAEVTMEPFKETYQYYPSVTTSSSVRRFSVVSAERGAESYTFHLK
QNITYRDCRHNSQAATPETLQINMERVFVMYDKEETFKSMLFLTFNGSVLFSMFVADTSV
VELLNPCYTGSHDCDTTAQCIPLEGQAFRCQCATGYRGDGQNCNDIDECAEGLSSCGEHS
QCLNLPGTHRCQCQSGFESSYDGHTCVDIDECSSSPCHINARCINDLGSFQCQCLPEYYG
DGFQCSPRSDRLRSQCEQHRERLQSEGQTSVGAYIPQCDSDGQYQPRQCHGSTGQCWCVD
SRGEERPGTRTPPGAAPVECETPDRPKTQCEHHRDSVRTDSNDGRLINGAYVPQCDENGQ
YRPLQCHGSTGYCWCVDSRGEERPGTRSPPGSPPIDCDKPDRPKSLCEHHRDSVQTTDSD
GRPLLGAFVPQCDENGQYLQQQCHGSTGHCWCVDSRGQERAGTRTPPGTPSVDCSRADEP
ERPKTRCEHHRDGVQNSGSDGLPPIGAYIPQCDENGQYLPEQCHGSTGHCWCVDSIGQER
LGTRTPPGSLRVDCSREGEPERPKTHCELHRDSFLASGPDGRPLVVAYVPQCDENGQYLP
EQCDGSTGYCWCVDERGQELAETRTPPGTPRMNCSIADEPQRPKTHCEHYRDSVQTSSPD
GLPPVGAYVPQCDENGQYLPEQCDYSSGHCWCVDSQGQERGGTRTPPGSPRVDCSREDEP
QRPKTHCEHYRDSVQTSGPDGLPPLGAYVPQCDESGQYLPQQCHGSTGHCWCVDSEGQER
AGTRTPPGTPRVDCSKADESEPPKTRCQNHKERGYVPQCDDDGQYIPLQCQPSTGYCWCV
NKDGEEREGTRTPPGTQPKDCTKPASNSRVESVCERWRASLIEQYGGKPDPQQYLPQCEP
DGEFSPVQCYGESTYCWCVNKEGQEITGTRSHDAVKPACLPTVAPPVVRPVTRPDVTPPA
NTDVTLLYAQGQKIGALPLNGTRLDAARSSTLLTLHGSIVVGIAYDCKENKVYWTDLSAR
TINRASVASGAEPEILISTGLFSPEGLAVDTKRRLMFWVDSNTDVIESADLDGSGRRTLF
DLDLVNPRAIIVVSSTGSLYWTDWNREAPKIETSTVDGQGRRVVVSDGVGLPNALTYDSS
SGQICWADAGTKRLECISPNGSGRRVISSGLNYPFSMVYYSNHFYYSDWRRDGVIAVSKD
SSKFTDEYLPEQRSHLYGITIATSHCLPGSH
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggacagaggagcgatgctgaccgcggctctgctgtgctgctggagctgctccgtgtat
ttggtcacagccatccggaggacagatctgtttccttatgggactttgcatggagatgca
attctaccagagggcgacgatgagacctccagagcgctgacccttcctagacccctttac
ttttttgactcctcattctcccagctctatgtggccaccaatgggatcatctcggcccag
gacctgccgatggaacagcagtatgttgacgacggcctccctacagacttccccgtggtg
gcacctttcctggctgacattgataccagtggaggacgaggacacatttattaccgggtt
actgggacccctggcatcctgaatagagtcacccaggaggtgaaccgtggattcccagac
gcaaaattcactcccacacacgctgtggtggcaacatgggaaaacgtggcggcgtatgaa
gaccaagctcgagccgctggtccttcgaacaaggtcaataccttccaagctgtgattgga
tatgatgaaaccgactcgtacgttctctttctttaccctgaagatggacttacgtttttt
gggacacggcctaaggagtcctataatgtggagatagagcttcctgctagagtcggcttc
agtagaggagaagtttcttatttcatcatttccaaaaccgatggacctttttacagcgtt
acccaggatgaagacagtgttaaaaggctttctcaggttggaaacactggaatagctggc
gtttggcttttccacactggaagacgttacttcttccaagacatcattcctgcatctact
ggtggtctccttgttatcccgcctactgttggatatagcccctacctggacacaaccacc
cctgaatatgagtttgaagattatacctttgagccagagacagaagaagaggagggtagc
caaacactgacaggcagagaccctgagtaccaaccagatcctcgtggtagcgaccactca
gactcccttcaacctggaggtttcgcgcctcctcctcattcagaagactctgatcggcag
atatcatacaaaagagaagatgtaccattgcctttggagccggtagaaaggcagtacggt
gctcctcgtgttggcgtccaagaaggacgggtccaggaacagcaaccacagcttaatttg
gacgtggtggacttgtttccaccccttacaagcaaagtagccctgtctcctggaggacac
gtggtcagtgtggatgaagatgatgttgactttgacacaggagtgatccagtacacaacg
gagaataaggaaacgtgtgccaggttccagaggcaatgttcccagaatgcattctgttca
gattatcccacaggattttgctgtcactgccaaacaggcttctacggaaatggccgccaa
tgtctaccagacggtgctcctcagcctgtcagcggtaaggtgagcgggacggtgacggtc
ggctccactccgtttgagctgaataacatcgaccttcatgcctacatcgtggttggagac
ggaagagcatacacagctattagtgaggtgccagagtcattgggctggcccatgatgtcc
gtttcaccaatcggagagcttttcggatggctgtttgctctggagctgcccaatagccag
gcaggatttaaaatcacaggtgccgagttcagtcgtcatgctgaggtgctgtttaaccct
gggaaccagcgcctgtccatcatccaaacaggccgtggccttgacgaacacaaccacctc
agcgtggatacagcaatcaatggcaatgtgccatacatcccccctggagctgaggttact
atggagcccttcaaggagacctaccaatactacccatctgttacgacctccagctccgtc
aggcggttttccgttgtttcagctgaacggggcgcagagtcctacactttccacctgaag
cagaacatcacctatcgtgactgtcgccacaacagccaggccgccacccctgagacgctg
cagatcaacatggagagggtgtttgtgatgtacgacaaggaggagacattcaaatcaatg
ctttttttaactttcaatggttctgttttgttctccatgtttgtagcagatacttctgtg
gtcgagctgttgaacccctgctatactgggagccatgactgcgacaccacagcccagtgc
atcccactggagggacaagctttccggtgccagtgtgccactggttatagaggagatgga
cagaactgtaacgacattgatgagtgtgcagagggtttgagctcttgtggcgaacactcc
cagtgcctcaaccttcctggtacacaccgctgccagtgccagagcggctttgaatccagc
tacgacggccatacttgcgttgacatagatgagtgcagctcctctccatgtcacatcaat
gccagatgcatcaatgatctcgggtccttccagtgtcagtgcctgcctgaatattatggg
gatgggttccagtgttccccccggtcagatcggctgaggagccaatgcgagcagcacaga
gaacgtctacagagtgaaggacaaacaagtgttggagcttacatccctcagtgcgattct
gatggacagtatcaaccacggcagtgccatggttctactggacaatgctggtgtgtggac
agtagaggagaggaaagaccgggaaccaggactccccctggagcggcgcctgttgaatgt
gaaacaccagatcgcccaaagactcaatgtgagcaccacagagacagtgttcggaccgac
agtaacgatggacgtctaataaatggagcttatgtacctcagtgtgatgaaaatgggcag
tacagacctctgcagtgccacggctctactggatattgttggtgtgtggacagtaggggg
gaagaaagaccaggaacccgttctccacctggttcaccccccatagactgcgacaaacct
gatcgtccaaaaagcctctgtgagcaccacagagacagtgttcagaccacagactcggat
ggacggcctcttcttggagcttttgttcctcagtgtgatgaaaatggacagtatctccaa
cagcagtgccatggttctactggacattgttggtgtgtggacagtagggggcaggagaga
gcaggaaccaggactccacctggtacaccttctgtggactgcagcagagcagatgagcca
gagcgtccaaagactcgctgtgagcatcacagagacggcgttcagaactccggttcagat
ggacttcctccaattggagcctacatacctcagtgtgatgaaaatggacagtatctacca
gaacagtgccatggttccactggacattgttggtgtgtggacagcattggacaggagagg
ttgggaaccaggacgccacctgggtcactccgtgtagactgtagcagagaaggtgagcca
gagcgtccaaagactcactgtgagcttcacagagacagttttctggcctccggtccagat
ggacgtcctctcgttgtagcctacgtacctcagtgtgatgaaaacgggcagtatttacca
gagcagtgcgacggttctaccggatactgttggtgtgtagatgaaagggggcaggagctg
gcagaaaccaggactccacctggtacgcctcgtatgaactgcagcatagcagatgagcca
cagcgtccaaagactcactgtgagcattacagagacagtgttcagacctccagtccagat
ggacttcctccagttggagcctacgtacctcagtgtgatgaaaacggacagtatctacca
gaacagtgtgattattcctctggacattgctggtgtgtggacagtcaaggacaggaaaga
ggaggaaccaggactccacctggttcacctcgtgtagactgcagcagagaagatgagcca
cagcgtccaaagactcactgtgagcattacagagacagtgttcagacctccggtccagat
ggacttcctccacttggagcctacgtacctcagtgtgatgaaagcggacagtatctacca
caacagtgccatggttctactgggcattgctggtgtgtggacagcgagggacaagagagg
gcaggaaccaggactccacctggtacacctcgtgtagactgtagcaaagcagatgaatca
gagcctcctaaaactcggtgtcagaatcataaggaaaggggatatgtacctcagtgtgac
gatgatggacagtacataccactgcagtgccagccctccaccggttattgttggtgtgtc
aacaaagatggagaggagagagagggaaccaggacaccgcctgggactcaaccaaaggac
tgtacgaaaccagcatctaacagtcgagtggagagcgtgtgtgaacgctggagagccagt
ttgatcgagcaatatggtggaaaaccagacccacaacagtatttgcctcagtgtgaacca
gatggagaattcagtcccgtccagtgttacggggagtccacttactgttggtgtgtgaac
aaggagggacaggaaatcactggtactcgttcacacgatgctgtcaaaccagcgtgcctc
ccaacagtggcaccccccgtcgtacgtcccgtgacccgtccagacgtgactcctccggca
aacaccgacgtcactctcctctacgctcaggggcagaaaataggagctctgcctctgaac
gggaccagactggatgcagcgcgctccagtactctgctgacgttacatggctccatagtt
gtcggcatagcctatgactgcaaagaaaataaagtctattggacggatttgtcagcgagg
acgataaacagagcttctgtggcatccggagctgagcctgagatactcatcagcacaggt
ctcttcagtccggaaggcttggctgtggacaccaaacgcaggttgatgttctgggtcgac
tcgaacacagatgtgattgaaagtgctgacctggacggcagcggaaggcggaccctgttt
gacttggacttggttaaccccagagccattatagtggtctcatccactgggagtctatat
tggactgactggaacagggaggctcctaagatcgagacctccaccgtggacggtcagggc
cgcagagtggtggtgtctgacggggtcggtttgccaaacgctctgacgtacgactcctcc
tctggacagatctgctgggcggatgccggtacaaagcggttagagtgcatctctccaaat
ggctctggacgaagagtgatcagctctgggctcaactaccccttcagcatggtctactac
agcaaccacttctactacagcgactggaggagggatggagtgatcgctgtgagcaaagac
agcagcaagttcactgatgaatacctgccagagcagcgctctcacctgtacggtatcacc
atagcaaccagccattgtctaccaggtagccactaa
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integrated database retrieval system
