Cyprinodon variegatus (sheepshead minnow): 107086970
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Entry
107086970 CDS
T06110
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107086970
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Others
Others
107086970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
107086970
NCBI-ProteinID:
XP_015233770
Ensembl:
ENSCVAG00000011571
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEREVSFCPKWHGALCSGLFFILSCLALVAEADITCRSCQDGYKWRPQELLLRVETSGPA
AGFQGEVWGSGGRTGRVLCEPGSAGCAELSRITDSWSGQPGQGKVGLTSQRFKRDSGGAR
TPAEGAGAAEERRVPRWSREERRAAGARQEDLKLNSSTFALTGDSAHNQAMVHWSGHNSS
VILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIMLL
TDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRW
QLVHEKVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANKGKPFPGYI
DPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDVFTPMKLPKYTLPKELHVISTDENRVVAA
VQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGLEGNVMVDLYEVAGIKGMFLANKKTD
NQVKTYITYNRGRDWRLLQAPSRDLRGNSIHCVLPYCSLHLYLHVSANPYTSGNIASRES
APGIIVASGSIGSELTTSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPLP
IRHLWLSFDEGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHFSHRSEWQLVKIDFR
SIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTFSVTMTSAPCDCTE
ADFECDYGYERRTDGKCSPAFWFHPSAMSRSCTTGMTFLNSTGYRKVVSNNCTAGVIAEY
TARRQHCPIQAPKGLHLVTSEGRLTATLGTNVTFLVFLEEGDGARTSITLDFGDGHALTY
SNVSSIEDGIKHIYKSVGIYRVTATGENSLGSETATLFLHVTCQLEHIHLSAPFVAVKNK
EVNLTAVLHPSQVGTVTYIWWIGNNTEQPVITLEGSVACTFPREGINTVTVQVAAGNTIL
QDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIRKSLIQATGVREDLLLVTV
LPGLPTAAEFFLLPDKQLTEGKPEKSSAHLDQLSELLLNALNQNLVQFTLRPGVQVTVYA
AHLSAAPLVDTSENHSGSAMLMLLSVVVAGLAVFVIYKFKRKIPGLNVYAQMQNDKEPEM
MSPANPSEATPSSQQDLVPSLEILDTEFNSRPIGCMKPHVHVKFSTDLPTYIV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggtcagcttctgcccaaagtggcacggtgcgctctgctccgggcttttc
ttcatcctgtcctgcttggctctcgtcgccgaggcggacataacctgcaggtcatgtcag
gatgggtataagtggcgtccacaggaattactgctgagggtggaaacaagtggccccgct
gcggggtttcagggggaagtttgggggagcggcggccggaccgggagggtcctctgcgag
cctgggtctgccggatgcgcggagctgagccggattacagacagctggagcggacagcct
gggcaggggaaagttggtttgacttcccagcgcttcaagagggacagtggcggtgctaga
accccggctgagggagcgggcgcggcggaggagcgcagagtgccgcgctggagcagagag
gagcgcagagctgcaggtgcgcggcaggaggacttaaagctcaacagctccacgttcgcc
ctgacaggcgactcggcccacaaccaggccatggtgcactggtccggacacaacagcagc
gtcattctgatgttaaccaaactctttgacttcaacctcaacagtgtgactgagagttca
ttatggaggtcaactgactacggtgcaacataccagaagctgaatgacaaagtgggggca
aagacgatcctcagctatctgtatgtgagccccaacaacaagaggaagattatgctgctg
acggatccggaggtggagagcagccttctgatcagctctgatgaaggagccacataccag
aagtaccggctgaacttctacatcctgagcctgctcttccaccctgaacaggaggactgg
atccttgcatacagccacgaccagaagctttacagctctgtagagtttggaagaaggtgg
cagctggtacacgagaaagtggctcctaatcgtttctattggtccaagatgggtttggac
aaagaaccaggcttaattcacctggaaaccagcatctctgaaggacaggcgctttatgtc
acctgcaagctgcagaactgcaccgacgccaacaagggcaaaccgttccccggatacatt
gaccccaattccctggtggtgcaggatgagtatgtgtttgtccaggtgtccactgcaggg
aggccggtctactatgtttctgcaaaacgagacgtctttaccccgatgaagctgccaaag
tacaccctgcccaaggagctgcatgtgatcagcacagatgaaaaccgagtggtggctgcc
gttcaggagtggaaccagaatgaaacctacaacctgtatgtgtctgacacttctggagtc
tactacactctggctctggagaacgtggtcagcagcatgggcctggagggaaacgtcatg
gtggacctctatgaggtcgctggaataaaagggatgtttcttgccaacaagaagacggat
aaccaagtgaagacgtacatcacctacaaccgcggcagagactggaggttgctgcaggct
ccgagcagagaccttagaggaaacagtatccactgtgtgctgccgtactgctcattacat
ctctatcttcacgtgtctgccaacccctacacatctggaaacatcgccagcagggagtct
gcgcctgggatcatcgtcgcctcaggctccatcggttcagagttgaccaccagcaatgtc
agcgtgttcatcacctctgatgcaggaaacacgtggagacagatctttgatgaggagtat
gctgtgctttatctcgaccaaggtggagccttggtggcaataagacacactccacttccc
atccgacacctgtggttgagttttgacgaaggacggcagtggaacaagtacagcttcacc
aacacgcctctgtttgtggacggagtgctgggcgaaccaggggaggagaccctcatcatg
acgatctttgggcacttcagtcatcgctctgagtggcagctggtaaaaatagatttcagg
tccatcttcaacaggaggtgcaccgaggcggactaccagacgtggcacctacacaaccag
ggtgagccgtgcctcatgggggtgaaaagaatctataggaagctgaagcccacctccagg
tgcgtcatgggaaagaccttctccgtgacgatgacctcggctccctgtgactgcacagag
gctgactttgagtgtgattatggctacgagagaaggactgatgggaagtgcagccccgcc
ttttggttccatccatctgcgatgtcccggagctgcacaacaggaatgacttttctcaac
agcaccggttacaggaaagtggtgtctaataactgcacagctggagtgattgcagagtac
acggccaggcgacagcactgtcccatccaggctccaaaaggtctccacctggtcaccagt
gagggcaggctgacagctacactgggaaccaatgtcaccttccttgttttcctcgaggag
ggagacggagcgaggacaagcatcactttggactttggagacggccacgccctgacatac
tccaacgtcagctccatcgaggatggcatcaaacatatttacaaatccgtggggatctac
agggtgacggccactggggagaacagccttggctctgagaccgccacgctctttctgcac
gtcacatgtcagctggagcatatccatctctctgctccctttgtggcggtgaagaacaag
gaagtgaacctgaccgccgttctgcatcccagccaagtgggaacggtcacctacatctgg
tggatcggaaataacacagagcagccagttatcaccctggaggggagtgtggcgtgcaca
ttccccagggaggggatcaatacagtcacggtgcaggtggccgctgggaatacaatcctc
caggacagaaagactatcgctgtccatgaatacttcagatcccatctgctcgccttctca
tccaacctggacgaccacaacccggacgttgctgagtggcggctggatgtaagccgggtc
atcaggaagtctctcatccaggctacaggcgtgcgagaggatctgctcctggtcaccgtc
ctcccaggtttacccacagccgccgagttcttcctcctgcctgacaagcagctcaccgag
ggcaaaccagagaagagctcagctcatttagatcagctctcagagcttctgctgaatgcc
ttaaaccaaaacctggtccagttcacgttgcggccgggagtccaggtcaccgtgtacgct
gctcacctgtcggcagcgcccctggtggacaccagcgagaaccacagtggctccgccatg
ctaatgctgctctctgtagtggttgcgggtttagctgtgtttgtcatctacaagtttaaa
aggaagatcccaggcctcaacgtctatgcgcagatgcagaacgacaaagaaccagaaatg
atgagtccagccaatccctcggaggccacgcccagctcacagcaggatttggtgccttct
ctggagattctggacaccgagtttaactcgcggcccatcggatgtatgaaacctcatgta
catgtgaaattctccacagatctccccacatacatcgtctga
DBGET
integrated database retrieval system
