KEGG   Cyprinodon variegatus (sheepshead minnow): 107087420
Entry
107087420         CDS       T06110                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107087420
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    107087420
SSDB
Motif
Pfam: PRY zf-C3HC4_4 zf-RING_UBOX zf-B_box zf-C3HC4 SPRY zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-RING_6 U-box zf-RING_10 Prok-RING_4 MRP-S31 Gp58 DUF4239
Other DBs
NCBI-GeneID: 107087420
NCBI-ProteinID: XP_015234476
LinkDB
Position
Unknown
AA seq 554 aa
MAQKVTNLEQEKISCSICLDLLKDPVTIPCGHSYCMDCIKDHWDTDGPRRNYSCPQCRKE
FRPRPVLQKNIMLAALIDDLNGIHISPADHCYAGPEDVACDVCIGRKLKAVKSCLVCLAS
YCENHLQPHYDAPPLKRHKLTHPVKKLQEIICSRHDEVMKIFCRTDQQCICYLCLMDEHK
GHETVPAAAERTEKQKELQERRQQIQQRIQDQEKDVKLLQQEVEAINGSADKAVEDNEKI
FTDLIRLILKRSSDVKQQIRSQQETEVSRVKELQKKLEQEITELKRKDAELEKLSITEDH
TQFLQNYPSLSALSESTHSSSINIRPLRYFEDVTAAVSELREKIQDILRDTWTNISELIA
EVDVLLSEPMTRAEFVKYSQEITLDPNTANRFLLLSEGNRKVEITDEPQPYADHPDRFTD
YKQVLSRESLTGRCYWEVEWRGEGGVDAVAASYGNISKEGRLDECLFGGNDKSWSLYSYT
NGYTFSYNNIHTPVSGPVSSRIGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGV
RLYDGSSVEFIKLK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggctcagaaggttactaatctagagcaagaaaaaatctcctgctccatctgtttggat
ctgctgaaggatccggtaaccattccctgtggtcacagctactgtatggactgcattaaa
gaccactgggatacggatggtccaaggaggaactacagctgccctcagtgcaggaaagag
ttcagaccaagacctgtcctgcagaaaaacatcatgctggctgctttaatcgatgatcta
aatggaatccacatttctccagctgatcactgctatgctggacctgaagatgtggcctgt
gatgtctgcatcgggaggaagctgaaggctgtcaagtcctgtctggtttgtttggcttct
tattgtgagaatcacctccagcctcactatgatgctccaccattaaagagacacaaactg
acacaccctgtgaaaaagctccaggagatcatctgctctcgtcatgatgaggtgatgaag
atcttctgtcgtactgatcagcagtgtatctgttatctctgcttaatggatgaacataaa
ggccatgaaacagtcccagctgcagcagaaaggactgagaagcagaaggagctccaggag
agacgacaacaaatccagcagagaatccaggaccaggagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatggctctgctgataaagcagtggaggacaatgagaagatc
ttcactgatctgatccgtctcatcctgaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagagcttcagaagaagctggaacaggag
atcactgagctgaagagaaaagatgctgagctggagaagctctcaatcacagaggatcac
acccagtttctccagaactacccctcactgtcagcactcagtgagtctacacactcatcc
agcatcaatattcgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagagaaaatacaggacatcctgagagacacatggacaaacatctcagagttgatcgct
gaagtggatgttttactgtcagaaccaatgaccagagctgagtttgtcaaatattcacaa
gaaatcaccctggatccgaacacagcaaacagatttctgttattatctgagggaaacagg
aaagtagaaataactgatgagccacagccttatgctgatcatcctgacagattcactgat
tataaacaggtcctgagcagagagagtctgactggacgctgctactgggaggtggagtgg
agaggagaagggggagttgatgctgtagcagcttcatatggaaacatcagtaaagaagga
agattagatgaatgtttgtttgggggaaacgacaaatcttggtcattatacagttacact
aacggttacacgttttcctacaacaacatccatactccagtatcaggtccagtttcctcc
agaataggagtgtatctggatcacagagcaggtattctgtctttctacagcgtctctgaa
accatgactctcctccatagagtccagaccacattcactcagcctctatatgctggggtt
aggctttatgacggatcctctgttgagtttattaaactgaaataa

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