Cyprinodon variegatus (sheepshead minnow): 107087637
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Entry
107087637 CDS
T06110
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107087637 (thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
107087637 (thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107087637 (thoc3)
03041 Spliceosome [BR:
cvg03041
]
107087637 (thoc3)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107087637 (thoc3)
Spliceosome [BR:
cvg03041
]
Complex C
Other components
EJC/TREX
107087637 (thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107087637 (thoc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
RMC1_N
NBCH_WD40
Coatomer_WDAD
PD40
Nup160
Cytochrom_D1
Peptidase_S9_N
DPPIV_N
IKI3
YNCE
PROPPIN
Motif
Other DBs
NCBI-GeneID:
107087637
NCBI-ProteinID:
XP_015234802
Ensembl:
ENSCVAG00000006941
UniProt:
A0A3Q2DUK8
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MASQYYQEMQESFRNNNKSREFQAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCVATVNTKGENINICW
SPDGQTVAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPDLKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAFACDDK
EGKYDSNREAGTVKLFGLPNDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacaatattaccaagagatgcaggagagcttcagaaataacaacaaaagccgg
gagttccaggctcatacagccaaagtacattcagtggcctggagctgcgatgggaggagg
ctcgcctccggctcgtttgataaaacagccagcgtttttgtcctggaaaaggaccgtttg
gtgaaggagaacaactacagaggacacagtgacagcgtggatcagctgtgctggcatcca
accaaccccgatctgtttgtcactgcgtccggagacaaaaccattcgcatatgggacgtg
cgcacaaccaaatgcgtcgccacagtcaacacgaagggtgagaacatcaatatctgctgg
agtccagacggtcagactgtcgcagtcgggaacaaagacgacgttgtgaccttcatcgac
gccaagacgcaccgctccaaggctgaggagcagttcaagtttgaggtgaacgagatctcc
tggaacaatgataacgacatgttcttcctcaccaacgggaacggctgcatcaatattctg
agctatccggacctgaagcccatccagtccatcaacgctcacccatccaactgcatttgc
atcaagtttgaccccacggggaaatactttgccacaggaagtgctgacgctctcgttagt
ctgtgggacgtggaggagctggtatgtgtgcgctgcttctccagactggactggccggtg
aggactctaagcttcagccacgatggaaagatgttggcctctgcctctgaggatcatttt
attgacattgcagaggttgaaacaggtgagaagctgtgggaagtgcagtgtgattctcca
actttcacagtcgcctggcatccaaagagaccgttgctggccttcgcctgtgatgacaag
gagggcaaatatgacagcaacagagaggcaggaacagtgaaactgtttggccttcctaat
gactcctga
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integrated database retrieval system
