KEGG   Cyprinodon variegatus (sheepshead minnow): 107088357
Entry
107088357         CDS       T06110                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107088357 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvg03041]
    107088357 (sf3b4)
Spliceosome [BR:cvg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107088357 (sf3b4)
 Complex B
    107088357 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    107088357 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 107088357
NCBI-ProteinID: XP_015235967
Ensembl: ENSCVAG00000005536
UniProt: A0A3Q2DSX5
LinkDB
Position
Unknown
AA seq 389 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPVTAPAVLTAMGTAMTIPGLPPPG
AFPPVPPPGTMPPAMPPSMAMPPNAVPVQPVSAGGPLSGPPPFPPANMPPGMPQMPMPPP
APPGMVPPPPAPPGSAQRAPLPPNMPPPPPMGMPPRAPYGPPMGMRGPPPPMPPPGYGAA
PPGPPRPPFGFQRAPPMPPRPPGAPPRVP
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggccgcgggaccaatttcggaaagaaatcaagatgcgactgtgtatgtgggcggcttg
gatgaaaaggtgtcagagccattactgtgggagctcttcctgcaggctggtcctgtggtc
aacacacacatgcccaaagacagagtcactggccaacatcaagggtatggctttgtggag
ttcctcagtgaagaagatgctgattatgccataaaaatcatgaatatgataaagctctat
ggaaaaccgattagggtcaataaggcctcagcacacaataaaaacctagatgttggtgca
aacatcttcattggaaatttggacccagagatagacgagaaacttctctatgacactttc
agtgcttttggtgtgattctccaaacgccgaagataatgcgggacccagacacaggaaac
tcgaagggctatgcattcattaactttgccagttttgatgcgtcggacgcggccatcgag
gccatgaatggccagtacctctgcaataggcctatcacggtgtcctacgcttttaaaaag
gattccaaaggagagcgacacggttcggccgccgagcgactgctggctgcacagaacccc
ctgtcccaggctgacagaccgcatcagctgttcgccgatgctccaccaccagtgactgca
ccggcagtcctgactgcgatgggaacagcaatgaccattccaggtctccctcctcctggt
gcttttcctcctgttcctccccctggaacaatgcccccagcaatgccccctagtatggct
atgcctccaaatgcagtaccagttcaaccagtgtctgctggtggacctctgtctggacca
ccgcctttccccccagccaacatgcctccaggtatgccacagatgcccatgccgcctcct
gctcctcctggcatggtgcctccacctcctgctcccccaggatctgctcagcgagctcca
cttcctccaaatatgccaccacctccaccaatgggcatgcctcctcgggcgccctatgga
cctcctatgggtatgagagggcctcctcctcctatgcctccacccggctacggcgcagcc
cctcctggtcctcctcgtcctccttttggttttcagagagcccccccgatgccacctagg
cccccaggtgcccctcctcgggtgccttaa

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