Cyprinodon variegatus (sheepshead minnow): 107088720
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Entry
107088720 CDS
T06110
Symbol
cercam
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00310
Lysine degradation
cvg00514
Other types of O-glycan biosynthesis
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107088720 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107088720 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107088720 (cercam)
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
107088720 (cercam)
Glycosyltransferases [BR:
cvg01003
]
O-Glycan biosynthesis
O-linked Gal type
107088720 (cercam)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
107088720
NCBI-ProteinID:
XP_015236557
Ensembl:
ENSCVAG00000011857
UniProt:
A0A3Q2CVM6
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MLFSVLVLVTLISKAECYFAAEKFPEESKMQPPTVVIAIIARNTAHSLPYYLGALERLNY
PKNRISVWAATDHNSDNTTAMLREWLTVMQSFYHYVEWRPMEQPTSYVGELGPKHWPNSR
YEYVMKLKQAALNFARKRWADYILYADTDNILTNPETLNLLIAENKSVIAPMLDSQGAYS
NFWCGITPQGYYRRTAEYFPTRYRHRHGCFPVPMVHSTLLLDLRKEDMKKLAFYPPHKDY
SWPYDDIIVFAFSCRAAEIQMYVCNKERYGYLNVPAKPYFTLEDDQLNFVHVHLESLIDG
PAMYPSRYVHMFPKQRDLMGFDEIYLINLRRRPDRRDRMLYSLNELEVDVKVVDAVDGNA
LNSSDIKFLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEVVDMQMDKALIFEDDVR
FEANFKRRVLRLIEEIEQVELDWDLIYLGRKQVNPGKEEAVENVRNLVVADYSYWTLSYA
ISQQGAQKLLNAEPLSKMLPVDEFLPIMYDKHPNEDYKSHFPNRNLQAFSTRPLLVQPCH
YAGDPQWVSDTETSTLWDDDSVRTDWRGSHKTLKGAAPPPEMLSASYRDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttattttctgttttagtcttagtaacactgatttcaaaggctgagtgttattttgct
gcggaaaagttcccggaggagtcgaagatgcagcctcccaccgtggtgatcgcgatcata
gccaggaacaccgctcattccctgccttactacctcggagctttggagaggctcaactac
cccaaaaaccgcatctctgtgtgggcggccacagatcacaactcggacaacaccacagcc
atgctgagagagtggctgactgtcatgcagagcttttaccattatgttgagtggaggcca
atggaacagccaacgtcttatgtgggagagctgggtccaaagcactggcccaacagtaga
tatgagtatgtgatgaagctgaagcaggcagctctgaactttgccagaaagcgttgggcc
gactacatactgtatgctgatactgacaacatcctcaccaacccagaaactctcaacctg
ctgattgcagagaacaagtcagtcatcgcccctatgttagattcccagggagcgtactcc
aacttttggtgtggaatcactccacaggggtattatcgccgaacggcagagtacttccca
acacgttaccgtcacagacatggctgcttccccgtgccgatggtccacagcacgctgctg
ctggatctgcggaaggaagacatgaagaaactggctttctaccctcctcataaagattat
tcatggccctatgatgacatcattgtttttgccttctcctgccgtgctgcagagatacag
atgtatgtgtgcaacaaggagcgctatggctacctgaacgttccggccaaaccttatttc
acactggaggacgatcagctaaactttgtccacgtccacctggagtcactgattgatggg
cctgccatgtatccctcgcggtatgttcacatgttcccgaagcagagagacctgatggga
tttgatgagatctatctgattaacctgcgacgccgacctgaccgcagagacaggatgttg
tactccctgaatgagctggaggttgacgtcaaagtggtggatgctgtggatggaaacgca
ctgaacagcagtgacattaagttcctgggtgtggaccttctgccaggatactacgaccct
ttctctggacgtaccctgaccaagggagaagtgggctgcttcctcagccactactacatc
tggaaggaggttgtggatatgcagatggataaagctctgatttttgaagatgacgttcgc
tttgaagcaaacttcaagcgccgagtgctccggctaattgaggagatagagcaggtggag
ctggactgggatttaatataccttggcaggaagcaggtgaatcctgggaaggaggaggcg
gtggagaatgttcggaacctggtggtggcagactattcgtactggactctgtcctacgcc
atctctcagcagggagcccaaaagctgctcaatgctgagccgctctctaagatgctcccc
gttgacgaattccttcccattatgtatgacaaacatcccaatgaagactacaaatcccac
ttcccaaacagaaacctgcaagcctttagcacgcgccctcttctggtgcagccgtgtcac
tacgccggtgatcctcagtgggtgagcgacacagagacctccactctgtgggatgatgac
tctgtaaggactgattggaggggctcccataaaacactaaagggggctgcgcctccacct
gagatgctctcagcatcttacagggacgaactctag
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