Cyprinodon variegatus (sheepshead minnow): 107090003
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Entry
107090003 CDS
T06110
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107090003 (med1)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
107090003 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
107090003
NCBI-ProteinID:
XP_015238615
Ensembl:
ENSCVAG00000007854
UniProt:
A0A3Q2FME8
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MAAGPGVSLQSGSPARELSISVQQGSNQTFGDRTKTEDITEAEKQSRMAALLERLHAKHN
ASRPWEGTFNVVRQAMEKRGVMNEAGHQLLLNCLETLQKALKVSSLPSMTDRLESIARQN
MLGSHLSPTKTECYITSDMFYVEVQLDAGGQLVDVKVAHQGENPTSCPELSQHLSEKNFE
AFSKHLKGLVDLYRLPGDNKLKTKMYIALQSLELDLTKMMHMFRLAMNANVVETILHGCV
GWLTPRSGGNLVSLQCYVSPYDIFEVDLTDNNVPRSLGVSVSVTIEGTSAVYKLPIAPLI
TGSHPVDNKGTPSFSTVSNSNSVDLPACFFLKMNRPMPFSLSFIQRLCNATSIPVFETSP
NLSPLYQLIVQSQLQLLEEGSSVPATLHNMHFYSVLPDQQHCYFLNGDAPVHDGHSLQGA
MVSKIPFRHPAQVPLLLDIIRHQAAYNTLIGSCVKQTSVKEDSAGLLQFEVCPLTDSSFS
VSFQHPVNESLVCVVMEVIDSRQVSCHLYKGPSDALICTDEFITKVVTRCMSIPVTMRAI
RRKAETIQADTPALSLIAQTVEIMVKNNPPPSGSPTYNMVAGDGTNPMGLPGLTGGNTPT
SGPPGGPNYAGPISSIFGMSRSDRQAQGECLTPGGVAGQQQQQQGHSDDYSKVTQNPILT
SLLQITGNVGSSPSSQNAPQPHQTPPPTSSPASNTKSHPMLMNLLKDNPTQDFAALYSSS
PLERQNSSSGSPRTDSMGGACPSGNGKGKKKRPRGPEKGGVLPGVGAGGGGGGLSVKPQP
GSSMPQHLQHHSVAHEDDFHRKLLSMDVDASQNSIFDVNLPGDGLDTHHSITPALSQCGT
PPPGSGMAYPQSHVQSQQQQAGSVPPRIVRLPSSDSIGPDITEILQDLPEQTGKGSGGSH
GQPEDGGPLGTPIRDSSSSGQGSAVFDSADIFNTNSNENPFTDAADLIAEAAATAATPNS
DSSSTNFFPDASDFNPDLLTSGHGFSQNYFDDSSPSADGDMDLVKGFGGGSQQNTPSGTP
QNPPHGQSTPESSLKDPFDMGVFGVNSGGGKPLLGQAPDLIDTHSGGSQSPLMMGISTAC
SDFKNAEPKIKQGLMRPKDESGGNGGSGSGMGMGSSSAESKQVKRSRTPSSEGKSKDKPP
KRKKLDPDGKSPSHSSGGRPYTPPSGGSGSGGSISGGGSKSPGSSGRSQTPPGGATPPIP
KITIQIPKGTITGGKTSSHGGYTSSSSATSGSGGGSGTSSSSKSHHSHSSSSGKIKSKEG
SMSQGNSSKPGGSGGGSGQSQMKGSSQGMSVGKPGSSPITKHGLSGPGGTGGGMGSGSKI
KPQGGKPPGSLMNPNIKPNISPSHSRSSSSGDKLSSPMKMQQSQVPGTPPSSKAKSPIGS
GSSSSGGSKSSSGGSSQKPSGGGSAGSASSSSGSASGSMSFSGGSQSQYGSGGGGGGGGN
GSEGNSGGSGGGAGQNNANNPNAKGKSPSRNKKPSLTAVIDKLKSVGSGGVGEDGCEVGT
PVGGPGSASTPGGPGNVPSGPSNMGSSKHSSSSQSGEYKREKSDKEGKSKVMVSGGSSGD
KKMMDPKTGGSGGTTLAKIIISKPDGGSPSIKAKVTLQKTGEGSGDSMRPQISSLKASPL
FSGSTPKHDRSSPSHSRSPGYTPLNQDSESESGSSSVAEKSHQNSPSSDDDQTMRPLPPQ
DYMSSIPLSSGEKHKKHKKEKKKLKDKDRERDRDRERDREKEKKKSSMSMGSSSHSTKTD
SWSRSPISASDSSLSMLSSDRPSRSSPMCMGNEDDDLMDSALIGNF
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggcctggtgtttcgctgcagagcggcagtcccgccagagaactttctata
tcagttcaacaaggatccaatcagacttttggagaccgtactaaaacagaagatataaca
gaagcagaaaagcagagtcgcatggctgctctgctggagcggcttcatgctaaacacaat
gcttcgcggccatgggaggggaccttcaatgttgtgcgtcaagcaatggagaaacgtggc
gtgatgaatgaagcgggtcatcagctcctcctgaactgtttggagacccttcagaaagct
ctgaaagtctcatctctcccctccatgactgatcggctggagtctatagctcgacaaaac
atgttgggctctcacctcagtccaacaaaaacagagtgctacatcacgtcagacatgttt
tatgtagaggtgcagctggatgctggtggccagttggtggacgtcaaggttgctcatcaa
ggggaaaacccgacgagttgtcctgaacttagccaacatctgagtgaaaagaactttgaa
gccttttctaaacatctcaaaggactggttgatttataccggcttcctggagacaataag
ctgaaaacaaagatgtatatagcactacagtctttggaactcgatcttaccaagatgatg
cacatgtttaggttagcaatgaatgctaatgtggtcgaaactattcttcatgggtgtgtt
ggctggctgactccccggagtggtggaaatctggtgtctcttcagtgctacgtgtcccct
tatgacatatttgaggtggacttaacagataataatgttccacgctccctgggtgtcagt
gtatctgtgaccatcgagggaacttcagctgtgtataagctcccgatcgctcccctcatc
accggatcccaccctgttgataacaaaggcacaccgtctttttccactgtgagcaactca
aacagcgtggacctgccggcctgttttttcctcaagatgaaccgccccatgcctttctca
ctctccttcatccagaggctatgcaatgccacttcgatccccgtgtttgagacgtcaccc
aacctctcacctctttaccagttaattgttcagagtcagctgcagcttctggaggagggg
agctctgtgcctgctacgttgcacaacatgcacttttattctgtcttaccagaccagcaa
cactgttatttcctaaacggtgatgcaccagtgcacgatgggcactcattacaaggagca
atggtgtccaagatcccctttcgccacccagcacaggttcccctcttgctggatatcatt
cgccatcaggcggcatacaacactctcattggcagctgtgtcaaacagacatctgttaaa
gaagacagtgcaggtcttctgcagttcgaagtctgtccgctcactgattcaagtttcagc
gtctccttccagcatcccgtcaatgaatctttagtctgtgtcgtcatggaggtgattgac
tctaggcaggtctcctgccacctgtataaaggcccatcagatgctttgatctgtacggat
gagtttataactaaagtcgtcacaagatgcatgtccattcctgttaccatgcgggccatt
cggaggaaagctgagaccatccaggcagacactccagccctctctttaatagcccagaca
gtggagatcatggtgaagaataacccacctccctccggcagtcctacttacaatatggtg
gcaggagatggaaccaacccaatgggactacctgggcttactggtggcaacacacctact
agtggaccacctgggggacctaattatgcaggtccaatcagttctatctttggaatgtcc
cgttctgacagacaagcccagggagagtgtctgaccccaggaggggttgctggccagcag
cagcaacagcaaggccattcagacgactacagcaaagtcactcagaaccccattctgacc
agtttgttacagataactggaaatgttggttccagtcccagctcccagaatgcaccacag
ccccatcaaactcccccaccaacttcatcccctgccagcaacacaaagagtcaccctatg
ctgatgaacctgttaaaagataaccccacacaggattttgctgcgctgtacagctcgagt
cccttagagcgacagaattcctcatcaggttctccacgaacagatagcatgggcggggct
tgtcctagtggcaacggcaaggggaagaagaagcgtcctcgcggccctgaaaagggagga
gtgttgcctggagtaggtgcaggtggaggaggtggcgggctgagtgtgaaacctcaaccg
ggttcctccatgccacagcacctccagcaccactcggttgctcatgaggatgatttccac
cgcaagctgctctcaatggacgtggacgcttctcagaattctatatttgatgttaacctc
cctggtgatggcttggacacacaccacagcataactccagcacttagccagtgtggaacg
cccccaccaggctctggcatggcttacccacagtctcatgttcagtctcagcagcaacag
gccggttctgtcccgcctcgcatcgtccgccttccaagctctgacagcattgggcctgat
attacagaaatcctgcaggatttacctgagcaaactggaaaaggtagcggtgggagccat
gggcaaccggaagatggagggcctttaggcactcccattcgtgactcctccagctcgggg
cagggtagcgctgtgttcgattcggcagacattttcaataccaacagcaacgaaaaccca
tttactgatgcggctgacctgattgctgaggcagccgcgactgctgccactcccaacagt
gactcctcttccactaacttctttcctgatgcgtctgacttcaaccctgaccttttgacc
tcgggccatggcttctcacaaaactactttgatgacagctctccaagtgctgatggagac
atggatttggtaaaaggctttgggggaggtagccagcagaatactccctcaggaactcca
cagaaccctccacatggacagagcactccagagtcctcactgaaggacccttttgatatg
ggggtctttggagtcaacagcggtggtgggaaaccacttttgggtcaagctcctgattta
atagacacacacagcgggggatcccaaagcccccttatgatgggaatcagcactgcatgt
tcggattttaaaaatgcagaaccaaaaatcaaacagggactcatgcggcccaaggatgag
agtgggggaaatggaggaagcggttctgggatgggaatgggaagcagctcagcagagagt
aaacaggtcaaacgaagccggacaccatcaagtgagggaaaatctaaagataaacccccg
aaacgcaaaaagctcgacccagatgggaagtccccctctcacagctcaggggggcgaccc
tacacgcctcccagtggtggttcaggctcaggaggaagcataagcggtggaggctccaag
tctcccggtagttctggacgctcacaaactcctccaggaggtgctacccccccaatcccc
aaaatcactattcagatccctaaaggtacgatcactggggggaaaacttcctcccacggt
ggatacacctccagcagctctgcgacgagcggctctggaggtggaagtgggacgagcagc
agcagcaaaagccaccattcacattcttcttcctctggaaagattaagtccaaagaagga
tccatgtcgcagggcaacagttccaaaccaggggggtcaggaggtggaagcggccaatca
cagatgaaaggatcctctcaaggtatgagtgttggcaaacctggatcatccccgatcact
aagcatggtctatctgggcctggggggactggaggtggaatgggaagtggcagtaaaatt
aagcctcagggaggtaaacctccgggttcacttatgaatcccaacataaagcctaacatc
tcaccttcccattcccgctccagcagctccggtgacaaactctcctctccgatgaaaatg
cagcagtcccaagttccaggaactcctccttcttccaaagctaagtccccaattggatca
ggaagcagcagctcgggaggatccaagtcttcctctggtggaagttcccaaaaacccagt
ggcgggggttccgctggttctgcatcgtcttcatccggctcagcgtccggttccatgagc
ttctctggtggatcccagtctcagtatggcagcggtggaggaggaggaggtggtggtaat
gggagtgaaggaaatagcggagggagtggcggaggggcgggtcagaacaatgctaataac
cccaacgccaaagggaagtctcccagtagaaacaagaaaccttctctaacagcagtcata
gacaaactaaagagtgtgggcagcggaggagttggggaggatggttgtgaggtagggaca
ccagttggaggtcccgggtcagcatctactcctggtggtcctggaaatgttcccagcgga
ccctcaaacatgggttcttctaaacattcttcatcctctcaaagcggagaatacaagcgg
gaaaagtctgataaagagggaaagtccaaagtgatggtttcagggggtagtagtggagac
aaaaagatgatggatccaaaaactggagggtcaggtggaaccactctggccaaaatcatc
atcagcaagccagatggtggctcccccagcatcaaggccaaagtgacccttcagaaaacc
ggggagggatccggagactctatgcgtccgcagatctccagcctcaaagcgtcccccctc
tttagcggctccactcctaaacatgaccggtcatcgccaagccacagtcgctcaccagga
tacacacctctgaaccaggacagcgagagtgagtctggaagcagctcggtagccgagaag
tctcaccagaacagccccagctcggacgatgaccagaccatgcgcccccttcccccccag
gactacatgagctccatccctctcagctcgggggagaaacacaaaaagcacaagaaggag
aagaagaagctgaaggataaggatcgagagagagacagagaccgagagagggacagggag
aaggagaagaagaagtcctccatgtccatggggtcttcttcacattcaacaaaaacagac
agttggtcccggtctcccatctctgcctcagattcatcactctccatgcttagttcagat
cgtccatcccggtccagtcccatgtgtatgggaaatgaagatgatgaccttatggactct
gcccttattggcaacttttaa
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integrated database retrieval system
