Cyprinodon variegatus (sheepshead minnow): 107090222
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Entry
107090222 CDS
T06110
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107090222
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107090222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
BshC
Remorin_C
Motif
Other DBs
NCBI-GeneID:
107090222
NCBI-ProteinID:
XP_015238974
Ensembl:
ENSCVAG00000016329
UniProt:
A0A3Q2D5A8
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MADPAAVETCTMPKQQSLCEVSPGNLKAGEPAACGQSVKDVQKCLQSTSVKPASENGLKQ
NGASTAPQDKTKEQSQNPKTAEVLGEQDSLKKSEDPKIPAENKIEPETQTNQEPKPEEVT
EDPLGPDDVVCDSCIETPCRALKSCLTCMVSYCEPHLRPHLENPKFQNHRLVEPLRDIER
RTCESHKWPLELFCCADICCICQDCVKEEHKGHKTTPVGEARRRIEKELREKQTEMVKMV
TAGDNAINKLQDNRVSIEQSVTKVRTVIESQFQELQAIVERAKKELTEILESEESQALKQ
ADGIQVHLEQRSTELKKTQAQTEKLSKNKNDVDFLQEYAEWKKETSDNSPSGIYIGLEDR
LDSFSHVIEESTKNLCDMLVSTYIQKVKEKCNNDEIGIKITVQTNTAAKHDSSAPNPKTR
ADFLQYAAQVSFDGNTAHKFLRLTEENKKVTNTTPWQHPYPDVPERFENCRQVLAAESFY
VGRHYFEADLTGEGTHVGLTYKSIDRKGEENNSCITGNNFSWCLQWNGRSFSAWHNNEET
PLNVGKFTRIGVYVDYSQGLISFYGVDETMPLLHQYKTQFLEPLYPAFFLPKKENIVLLV
APGEPLPLKSPSPPTSPADGGTSPQT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagcagcagtggagacttgcactatgcccaaacagcagagcctgtgtgaa
gtcagtccaggtaatctgaaagcaggtgagcctgcagcttgtggtcagtctgtaaaggat
gtccaaaagtgtcttcagagtacttctgtcaaacctgcttctgagaatggtctcaagcaa
aatggagcatctactgctcctcaggacaagactaaagaacaaagtcagaacccaaagact
gcggaggtcctaggagaacaagacagtctgaagaagtctgaagaccccaaaatcccagca
gaaaacaagatagagccagaaacacagacaaaccaggagccaaaaccagaggaagtaacg
gaggatccattgggccccgatgatgtggtatgtgactcctgcattgaaaccccttgccgg
gccctaaagtcttgcctcacctgtatggtgtcctactgcgagccgcacctcaggcctcac
ttggagaacccaaagtttcagaaccatcgactagtggagccgctcagggacatagagagg
cgtacctgcgagagccacaagtggcccttggagcttttctgctgcgctgacatctgctgc
atttgtcaggactgtgtgaaagaggagcataaaggccacaagacaactccagtgggggag
gcaaggagacggatagagaaggagctgcgggagaaacagactgagatggtgaagatggtg
acagcaggagacaacgccatcaacaaactccaagacaacagagtttctattgagcaatcg
gtgacaaaggtacggacggtgatcgagagccagttccaggagcttcaggccatcgtggag
agggccaagaaggagctgactgagatcctggagagcgaggagagtcaggcgctgaagcag
gctgatggcatccaggttcacctggagcagcggtccacagagctgaagaagacacaggcc
cagacggagaagctatctaaaaataaaaatgatgttgacttcctgcaggaatatgcagag
tggaagaaagaaacctctgataactctccatctggcatctacatcggcctggaggaccgt
ttggactccttcagccacgtgatcgaggagtccactaagaatctttgtgacatgctggtg
tctacatacattcagaaggtcaaggagaagtgtaacaacgatgaaataggtataaagata
acagttcaaacaaatacagctgctaaacatgactcttctgcacctaacccgaagacacgc
gctgactttctccaatatgccgcccaagtcagtttcgatggtaacacagctcacaagttc
ctccgcttaactgaggagaacaaaaaggtgaccaacaccacaccctggcagcatccttat
cctgatgttcccgagcgctttgagaactgccgccaggtcctggctgctgaaagcttctac
gtgggtcgtcactactttgaggccgacctcacaggcgaggggacgcatgtcggcctcacg
tacaagagcatcgatcgcaagggcgaggagaacaacagctgcatcacaggaaacaacttc
tcctggtgtctccagtggaatgggaggagcttctcagcgtggcacaacaacgaggagaca
cctctgaacgtggggaagttcactcgaatcggtgtttacgttgactactcgcaaggcctt
atttctttctatggcgtagacgagaccatgccactacttcaccagtacaagacccagttt
ctagagcctctctatccagctttctttctgccaaagaaggagaatattgtacttctagtg
gcccctggggaaccgttacctctgaaaagcccctctcctcccacttccccagcagatgga
ggcacttctccacaaacataa
DBGET
integrated database retrieval system
