Cyprinodon variegatus (sheepshead minnow): 107090301
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Entry
107090301 CDS
T06110
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107090301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107090301
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107090301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
107090301
NCBI-ProteinID:
XP_015239096
Ensembl:
ENSCVAG00000015095
UniProt:
A0A3Q2D2Y8
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MRVVGRRATAMSSKEKQLALLTVLGLVLLVFYYIPTFIYATLILVVCCFALYYRGGEQLP
ARLGPNPRVGLNVPAVLRRWFPAWETTGVSVAARGRPKSSSYRSELRETEGHSTQRHSET
RIYRGEALASDSFLFSPRDFLMGSYIGKPESPSTDSGRPRAARNPREQLRERLARPNHAV
YTPNRRLSFAGEPPGPTARFTITPQRHYPLQQPGVSSVGLLPPVSWDGFRKKNVLSPRNS
PAPLSPVTVKIARPDQRNPSVNHLSCAGLTRTPADPCSRESVLRVLKESRKREVEDEDRS
FTTAQKSKRRRNDSDGSAHSAFEPLLPNGAPSQLVPKPGTLKRGMTSATDETSMKRSRTS
SISSGTGIHAPRGTPGSRRNAIQSSYSSSVGLSQWKKPSAPSSPLSSPESSRSQTPDGVS
KRLREEDIQSPSSASSVRSDHTTLDKTPDTSKQTPTPKFPVKTPLDSTGSGGKRKRKIQL
VSSNRDDHITLPPPPELGYTITAKDLDEEKKAAISKIQKVLETPAPEPEQSASPAAPTST
QPAASTTTTLSSLLAAPLPTSSSAVPVINLDPSPSSSSAPAVANTLLEALKMKISIPASS
TSATSTASVSATPASAPTFKLTTSTIAPTAPPASQSQPPSAGVVSQPSAFTQVLAQVSKA
PTSIPAASLTGPTLFGLSNQLSTTSAPSASTAAAPASSSQPVSTTNPLLTAGFKPIFAAA
TTTSSAAASSESKPLLHNFKPIFPQPSPVSATSTASTLSASSTTSVFSLTTSSSTVAPSS
FSGFNNTAAGTASLGTVTTTQSAGQPVAKSLFGNWPAPSTTSSGAATTQPSSTGNTFQFG
AAATTTAAASAASTATTTTSNTTGFSFGSTQPDPQAPKVFSFGQNTTSQNTTTASFGGFA
MANTTSSAAPTSTTQSTFPFGKPAFEAPATQSTFGSSAAPPNASFTFGTGGASSTPAATA
SSAPAPFSFGAAANTATTTAAPSFGTPVKPAFGATGFAFGTNSSQPPAAPSFGAVTQTQS
SSSNTFAFGNSAPQPAPSGSAPAATGGFNFGASMPCQQFGTPVSSNPAPQMGSFNFGAAA
ASDKPAFGTSTPSFGQGATPGPLPFGSPATPVQGFNPVPFGSPATPTFSIGAGSKPSGAR
QRLQARRHNRKK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgtcgggcggcgcgctaccgccatgtcatctaaagagaaacaattagcgctt
ttgactgttttaggtctagttcttctagttttttactatatacctacctttatttacgca
actttaattctagtggtttgctgttttgccttatactatcgcggcggagaacaacttccc
gccaggctaggcccgaatcctcgggttgggctaaacgtcccagccgtgttgcggcgttgg
tttccggcctgggagacgaccggcgtgtcggtggctgcacgggggagacctaaaagcagc
agctacagaagtgagctccgggaaacagagggacattcaacacaaagacacagtgaaacc
agaatttatcggggggaagctttggcaagcgactcgtttcttttcagtccgcgggatttt
ctaatggggagttatatcggaaaaccggaaagtcctagcaccgactctgggaggccaaga
gcggcgagaaacccacgagagcagctgcgggaaaggctggccagacccaaccatgccgtg
tacaccccaaacaggaggctttcattcgctggtgagccaccgggtcccacggccaggttc
accatcacccctcagcgtcactaccctctgcagcagccgggcgtctcctcagtgggtctc
cttccccccgtcagttgggacggctttaggaagaagaatgtcctgagtcctcgtaactcc
ccggctcccctcagccctgtcacagtgaagatcgccaggcccgaccagaggaaccccagt
gtgaatcatctgagctgtgctgggctgacccgcacccctgcagacccctgctccagagag
agcgtcctgagggtgctgaaggaaagtcgcaagagagaagtagaagatgaggacaggagc
ttcacaacagcgcagaaaagcaaaagaaggcgtaatgacagcgatggaagtgcacactct
gcctttgagcctctgctgcccaatggagctccatcccagctggtccccaaaccagggacc
ctaaaaagaggcatgacgtcggcgaccgatgagacctccatgaagaggtcccgcacctcg
tccatcagctcagggactgggatccatgctccaagaggaacccctggcagcaggagaaac
gccatccaaagctcctacagctcctcggttggcctcagtcagtggaagaaaccctctgct
cccagctctcctctgtccagccccgagtcatctcgctctcagactccagatggagtctcg
aaaagactcagagaggaggacatccagtctcccagctcagcatcttctgtgaggtcagat
cacaccacattggataaaacgcctgacacttcaaaacaaactccaacccccaaattccca
gtcaaaactccactggactcaacaggaagtggtgggaagagaaaaagaaagatacagctg
gtgtccagcaatagagatgatcatatcactctgcctccaccccctgagctgggttacacc
atcaccgctaaagatcttgacgaagagaagaaggcagccatcagtaagatccagaaggtc
ctggagacccctgccccagaaccagagcagtcagcatctccagcagcacccacctccact
cagcctgctgcatccaccaccaccaccctgagtagcctcctggcagcccctctgcccaca
tccagctccgccgttccagtaatcaacctagatcccagcccaagcagcagttcagcccct
gcagttgccaacactctgctggaggccctgaagatgaagataagcatccctgctagctcc
acatcagcaacaagcacagcgtctgtatcagccacacctgcatcggcacctacctttaaa
ctgacaacatccaccatagcccccacagcgccccctgcctctcagtctcaaccaccttct
gctggtgttgtaagccaaccgtctgccttcactcaggtgctggctcaggtctccaaagct
cccactagtatcccggctgcttccttaacaggacctaccctgtttgggctgtcaaaccag
ctcagcacaacctctgctccttcagcctccaccgctgctgcccccgccagcagctcccag
cctgtcagtaccacaaaccctcttctgactgcggggttcaagcccatctttgctgccgcc
accaccacctcctcagctgcagcctcttcagaaagcaaacctcttctccacaatttcaag
cccatctttccacagccctcccctgtctcagccacctccacagcctccaccctctctgca
agcagtacaacctcggtattcagtctgacaacaagtagctccaccgtcgccccgtcttct
ttctctgggtttaataacacggctgctggcaccgcctctctgggcaccgtcacaactacc
cagtctgcaggccaaccagtggctaaatccctctttggaaactggcctgctccatccaca
accagcagcggcgctgctacgacgcagccctctagcacagggaacacatttcaatttggg
gctgcagccaccaccactgcagcagccagtgctgcatccacagccacaaccaccacctct
aatacgacgggcttcagctttggaagcacgcagcctgatcctcaggctcctaaagtgttt
tccttcggtcagaacacaaccagccaaaacacaaccactgcttcgtttggaggctttgct
atggccaacaccacttcctctgctgcccccacctccaccacccagtccactttccccttt
ggaaagccagcgtttgaagcaccagcgacacagtccaccttcggctcctctgctgcacct
ccaaacgcctcctttacctttggtacgggtggagcttcatccacacccgccgccaccgcc
tcctcagctccagctccttttagctttggggctgctgctaacactgctaccaccactgca
gctcccagctttgggactccagttaaaccagcttttggagccactggttttgcttttggc
accaactcgtctcaacctccagctgcaccaagttttggtgcagtgacgcagacacaaagc
tcctcctcgaacacgttcgcgtttggaaatagcgccccacagccggctccctctggatcg
gcccccgctgccactggtgggtttaactttggagccagtatgccatgccagcagtttggg
actccagtttccagcaatcctgctccacaaatgggaagcttcaacttcggggctgctgct
gcttctgacaaaccagcttttgggacatcgactccgtcgtttggccagggtgctactcca
ggcccccttcccttcggaagtcctgcaactccagtccaaggctttaatcctgtacccttc
gggtcccctgcgactcccaccttctctatcggagccggatcgaagccgtctggagctcgc
cagaggctgcaggcgcgacggcacaacaggaagaagtag
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integrated database retrieval system
