Cyprinodon variegatus (sheepshead minnow): 107090543
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Entry
107090543 CDS
T06110
Name
(RefSeq) zinc finger homeobox protein 4-like
KO
K09378
zinc finger homeobox protein 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107090543
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
107090543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2
Homeobox_KN
zf-C2H2_4
zf-C2H2_jaz
zf-H2C2_5
zf-met
zf-Di19
Motif
Other DBs
NCBI-GeneID:
107090543
NCBI-ProteinID:
XP_015239457
LinkDB
All DBs
Position
Unknown
AA seq
2796 aa
AA seq
DB search
MDTGEGGGGDGGGGEERDADLSPQALSLPLLTLAVIPEQGSSSSHTSAIAPAKESLTPPQ
QGKRGAEGSKAGEGGDEKEGGRHPLENEVQQRCGFKEDFAEGCLSGQRRDERKVHEDVVE
ASHTGGLPAALSSRGKEEGKEEEEAISNQSQTKSKCSLLPQQSQYSSSSSTAMASGTLDS
KTAASPKPSHTPSSCPKPFPISSVSPKHFSCPSSSSSLLSETEVKDIKGDQGWISGFPQS
FRSQQSSMAFPLAGIEPAGAPEDDVLAGVPHTSISNGNGAKAPEPNESQLDTGIEDEKNK
EEEQREGVPKNLNQELSNNSLTSHMTIMHSRNSCKTLKCPKCNWHYKSQHTLQVHMKDKH
PETGGQCVCGTSGGKCVCGGGPQGVCGYCTSGKPHPRLARGETYACGYKPYRCEVCDYAT
SSKGNLSIHMQSDKHLNNVQNGGHANGHMQSTLNNNSNKSSGGHPVDEQPYSKLPLTIPT
PTAQPAKITSPAQPHSHGKRWRCDVCDYETSIARNLRIHTTSEKHTHNMLRLQRGYYLSH
CRGLAPHLKHLQNPGGELTLNMRLTGQQVTEQPVTLGSTLTPSPSPSPSPPPAPSMSPTT
PLSQGVFQCLVCLCFSSDSLESVEKHLNAPRSLPQSEWCSLVAGGCHCKLCGYTTPLRAN
FSLHCQTDRHRTRYQLAAHLQEGGDRGQEGASLITKGNPVQLRCNLCDFVTSSLEKLQGH
SLTSNHGLSFRVYKFLQQYDGEVDGGSWLFHCLLCNHSSSSKLQVLKHSQTSAHQQREGL
LQLQPMGGEELAAIFTIRKSQSGIPGELTEDMETSSETSTDPLDTTKDKSYLGGKTAEET
GKTKEQERRDSMPLGKRPLSLHEEKETPTKRPRTHQQNENQQTVQCPLCQVRLPCSNLRL
HLTQVHSVAQDCVDKLISAVTPSIEHLESPLESEPQNLIAKNDLNSKPMKSNDGNCSHTA
ESIVNPPKNKGISTENTEGNVAAPKDVTALLTPPLEDNTTHPSNGTLAPQSPTQTPPSSP
PISPPGDPSPLSDRHGYRFRCSRCSLAFPTQEKLQLHWQYHAMRAATECPLCSRQCRSQE
ALQRHMQNTHSQQDSTQGQNPLFAPHTAPYLEHNKDSVQQEFSLSPQVGQEAGEGDDDKI
DEETLGMEVSEEKKVDKPKEKEVFHECNGVEKNSTEFEKGPTEEVVSEPTSSLLVKKSSN
PTMDRYLDPSRPYKCTICSESFTQKTILLVHYNSVSHLHRARRALQDSGTNSMAHESPRG
PDPRPYRCRLCGVGYSQSSTLDIHLRSVLHQTRARAAQNSAQHTPESTLTLPGSVPSTNA
QVATTRDETSKSFPFDNNPNGTSGSTSSSVSSGLLGENQPTLCDPTESQQAKKRVAELLA
SRNQMMLLQQQHLAQAQVQAQLQQQTALLQSQAIHHLPLGTENLFKQHFSLAPDNLLSLQ
QQLLLPFYLSGEVKLNPELNVKNQDLGFEASSKLIPEEQVKTDSKMRSQPEEKHTKKQNS
NSTVRQPNDHSQNDAKADVVCSGSSKKQDKTETEQNNSLVIQETEETGAVNESQKHQVAC
SSFTHLGSECPPPRVPYAAANGEPLKALLQSYGYELALQYLQSRHRHQLQSVQHTDKSKA
EEYSEQEKDELSPLQKEKIEVGIKICKEEEGNKDMYLKEQTRDNGFANKRKKCCETGQKC
RDCGKLFSNALILKSHQEYLHRMLFPTDALEKFSKEYRLQYDQMYPLVEQKPGENSAVST
EATASTSGPCKEPETPTDSVKHQEKKLESSPIQSVSEPINKTNNTTKEQKITASAASSQS
SPSQPPELKQEKVPFPESSSTATSHTTSPTTLPLSNIPMLPLSLSQLSIPPLSIPKLPLP
PIPFPMELPLLPPVVMQSMALQSQPWLDSSINPELAKFYQPQLNQTLLGQQPQLSPSLLG
QQAQPNPALLGHSPQLNKALLGQHSQQNQHGQQSQGSPSTLEQQQTKRTRTRISEEQLSV
LRKHFDINSLPSDEEINKMSSLSGLPHKVIKHWFRNTLFKERQRDKDSPYNFNNPPTTAL
DDFREDITMKQSLTLSPCSLSPDLSANSSPQPQMTEEPQRGRRSSRTRFTEQQLETLQGV
FEATPYPREEEYDRLSALLSLPNRVIVVWFQNARQRARKNQDRGTDDGLEEKSNLENINR
QINGCQVTDDDHQDNSFEDEEQGDHHNENSMDLTYEYYTHPDSPSLNSSIHCSESDHQTS
DGEQTSATKKQEVKITSTQANMGPASGNTQNSSLAEDMQQKEVFQSLKTASETPPQSPTE
MAQNWAASSSQTSSIPILSKAKSDHGKACSPLRVQPSEKEVDPSSSSSSALKSEKIPSWT
PDATTCLSTETQPQAVTQFQCSLCPLTLPSFQLWQEHQTRHLLTAQSQVQLLHSGFTDRP
MPYMMLHPNPSLMASQMLSGAMSQIHPNPTHPMISHLNNIQIKNTFSDHSSNTPNNSLNL
TKQSTKHVSDTSFEGQRGNREVDEEHRRDKRQRTTITPEQLEVLYQRYSLDSNPTRGVLE
SIARDVGLTRRVVQVWFQNTRARERKGQFRSMGPGSSFTLGLNHLRCPFCRALFKVRSAL
DAHMRSRHWAEAERAGYNLSISNGSNGQSGIGLTSATDRPGPSIPSAPIHNPENDRSNKE
FSPKPPGSSYCSSTNLKNPEEDEEYEDDDDDDYPCEESSSMADQDSPSPEIAGDQSSDMS
ETQSQQYHHYHQQQRQRTQMSHFQVLQLKTFYRNHRTPNRLECETLGRELGLPPRVVQVW
FQNARAKEKRARSLTSDTAEREPAELSSRTGERDRA
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggtgagggaggaggaggggatggagggggaggagaggagagagatgctgac
ctcagtcctcaggctttatctcttcctctcctgaccctggcggtcattcctgagcagggg
tcgtcgtcctctcatacctcagccattgcccctgccaaagaatccctgaccccgcctcag
caggggaagaggggcgcagaggggtccaaggctggcgagggaggagatgagaaagaaggt
ggccgacatccgctggagaatgaagtgcaacaaaggtgtgggtttaaagaagactttgcg
gagggatgtctgtcagggcaaaggagagatgaacgtaaggtacatgaagatgtggtagag
gcctcacatacagggggcctcccagcggccctcagcagcagaggcaaagaggagggtaag
gaagaggaggaggccatttcaaaccaaagtcaaaccaaatccaaatgttctttattacct
caacagagccagtacagctcttcttccagcactgcaatggccagtggcacactcgacagc
aaaacagccgcctctccaaagccctcccacactccctcctcttgtccaaagcccttccct
atttcttcagtctctccaaagcacttcagttgtccatcatcctcttcctccctgctgagc
gagacagaggtaaaggacattaagggagatcagggctggatttctgggtttccacagagc
tttagatcccagcagtcttctatggcttttccgctggcaggtatagagcctgctggtgca
ccagaagatgatgtgctggcaggggttcctcacacttccatttccaacggaaatggtgcc
aaagctccagaaccaaatgaaagtcagttagacacaggaatcgaagacgagaaaaacaaa
gaagaagaacaaagagaaggtgttcctaaaaacctcaaccaagagctttctaataactca
ctgaccagccacatgacaataatgcactcacgcaattcttgcaagactctcaaatgccca
aagtgtaactggcattacaaatctcaacatactctacaagttcacatgaaggacaaacat
ccagagacgggtgggcagtgtgtgtgtggcacctccgggggaaagtgcgtctgtggtggc
ggaccgcaaggtgtgtgtgggtactgcacttcggggaaacctcatcctcgtttggcacga
ggtgaaacctacgcctgtggctacaagccctaccgctgtgaggtctgtgactatgctact
tcatcaaagggcaacctcagcatacacatgcaatctgataaacatctcaacaatgttcaa
aatgggggacatgcaaatggtcacatgcaaagcactctcaataacaacagcaacaagtct
tctggtggtcacccagtggatgagcagccatacagcaagttacccctcactattccaaca
cccactgcccagcctgctaaaattacatcacctgcccaacctcactctcatggcaagcgg
tggcgatgtgacgtatgcgactatgaaaccagcattgcccgcaacctccgcatacacact
acaagcgagaaacatacgcacaacatgctccggcttcagagaggctactacctgtctcac
tgtaggggtctggccccacatcttaaacacctgcaaaacccaggtggtgagcttaccttg
aacatgagactgactggtcagcaggtgacagaacaaccagtcacccttgggtctacgctt
actccatcaccatccccctccccatctcctcctccagctccctctatgtctccaactaca
cccctttcccagggtgtgttccaatgccttgtttgcttgtgcttttcttccgacagctta
gagtctgtagagaaacaccttaatgcgccccgctccttgcctcagtctgagtggtgctcc
cttgtagcaggtggttgccactgtaaactgtgtggctacaccacccctttgagggccaac
ttctccttacattgccagactgacagacaccgcacccgttaccagcttgctgctcacctc
caggaaggtggagacaggggtcaggaaggcgcttccctcataactaagggaaaccctgtc
cagctgcggtgtaacctgtgtgactttgtaacaagcagtctggagaagctacaggggcat
tccctcacttcaaaccatgggctgagctttcgggtatacaagttcctgcagcagtatgat
ggtgaggttgatggaggttcatggttgttccattgtcttctatgcaaccactcctcttct
tctaaactgcaagtactaaaacacagtcaaacatcagcccatcaacaaagagaagggcta
ctgcagctgcagccaatgggcggagaagagctggcagccatttttaccatcagaaaatcc
caaagtggcataccaggagagcttactgaggacatggagacttccagtgagaccagcact
gatcccttggatacaaccaaagacaagagttatttaggagggaaaacagccgaggaaacg
ggaaaaacaaaagaacaagagagaagagattcaatgcctttgggaaagcggccgctttct
ttacatgaggaaaaggaaaccccaaccaaacgccccagaacacaccagcaaaatgagaac
cagcagactgtccaatgcccattgtgccaagttagactcccatgttcaaaccttcgactg
catctaacacaagtgcacagtgtggcgcaagactgtgtagataagctcataagtgcggtg
acaccttccattgaacaccttgagtctccgctggagtcagaaccacagaatctgattgct
aaaaatgatctgaactctaaacctatgaagagcaatgatggaaactgctcccatacagca
gagtctattgttaatccaccaaaaaataaaggcatctcaacggagaacactgaggggaac
gttgccgcacccaaagatgtcacagcactactcaccccacccctggaggacaacaccact
cacccctccaatggcacattggctcctcagtccccaactcagacacccccttcctctcca
cccatctcccctcccggcgacccctctcccctttcggatcgtcatggttaccggtttcgt
tgcagcaggtgcagcttggcatttccaactcaggagaagctccagctgcactggcaatac
catgccatgagggcggcgacagagtgccccctttgttcaagacaatgccgcagccaggag
gccctgcagagacacatgcaaaacacgcactcacagcaggacagcacccagggacaaaat
cctctctttgcaccacacactgcaccatacctggagcataataaggattcagttcagcaa
gaatttagtttatcacctcaagttggtcaagaagcaggagagggtgatgatgacaagata
gatgaagaaacactgggcatggaggtgagcgaggaaaaaaaagtagataaacctaaagag
aaggaggttttccacgaatgtaatggtgttgagaagaattcaacagagtttgagaaaggc
ccgacagaggaggttgtatcagaacctacttctagccttcttgtcaaaaagagctcaaac
cccacaatggatcgttatctagatccatccaggccttataaatgcaccatatgctcagag
tcttttactcaaaaaacaattcttctggtccattataattctgtatcccatctccatcgg
gctcgaagagccctgcaagactctggcacaaattccatggcccatgagtccccacgtggc
ccagatcctagaccttatcgctgcagattatgtggagttgggtatagtcagagttccaca
ctggacatacatcttcgttctgtgcttcatcagactcgagctcgcgctgctcagaactca
gctcagcataccccagagtcaactttaacccttccaggttcagttccctctaccaatgcc
caggttgctaccaccagagacgaaacctccaaaagttttccctttgacaacaatccaaat
gggacaagcggttcaacctcatcctcagtgagctcaggcttattaggtgagaatcaacca
accctctgtgaccctacagagtcccagcaagcaaagaagagggtggcagagctccttgca
tcaagaaatcaaatgatgttactacagcagcagcatttagctcaagcacaggtccaggct
caactacaacaacaaacagcactgcttcagtcccaagcaatccaccacctccccctaggg
acagaaaatctcttcaaacagcacttctcactggcaccagataacctgctttcccttcaa
cagcaactactcctgccattttacttgtcaggtgaggtaaagcttaacccggaattaaat
gtaaagaaccaagatcttggctttgaagcatcttccaaattaattccagaagaacaggta
aagacagattccaaaatgagatcccagccggaggagaaacacaccaagaagcaaaattca
aattcaactgttaggcagccaaatgaccattcacaaaatgatgccaaggctgatgtagtc
tgcagtgggtcctccaaaaagcaagataaaacagaaacagaacaaaacaattccttagta
atacaagaaacagaggagacgggtgctgtaaatgaaagtcagaagcatcaagtagcttgt
tcctcttttactcatcttggatcagaatgtccccctccaagagtgccctatgctgctgca
aatggggagcctctgaaagctttgctacagagttacggctatgagctggccctgcagtat
ttacaaagcagacacagacaccaactgcagagtgtacaacacactgacaaaagtaaggcg
gaggagtattcagagcaggaaaaagatgaacttagtcctttacagaaagaaaaaatagaa
gtggggattaaaatttgtaaagaagaagaaggcaacaaagacatgtatttaaaagaacag
actagagataatggatttgcaaacaaaaggaaaaaatgctgtgaaactggacaaaagtgt
agagactgtggcaagctgttttctaatgccctgatattaaaaagccaccaagagtatctt
cacagaatgttatttcccactgatgctttagagaaattttccaaagaatatagactacaa
tatgaccagatgtacccactggtcgagcaaaagccaggagagaattcagctgtttccacc
gaagctacagcttctacgtcaggcccatgcaaagaacccgaaaccccaacagactctgtt
aagcatcaagagaaaaaactggaatcttcaccaattcagtctgtttcagaaccaataaat
aaaacaaataacacaacaaaagaacagaaaataactgcatctgctgcatcatctcaatct
tctccttctcagccacctgagcttaaacaggagaaagtgccattccctgaatcctctagt
acggctacatctcatactacaagcccaacaactcttccattgtctaacatacccatgctt
cctctttccttgtctcagctttccataccaccattgtccataccgaagcttccactacca
ccaattccttttcctatggagctaccactcctaccaccagttgtgatgcagtctatggcc
ctccagagtcagccatggttagattcaagcataaaccctgagctggcaaaattttaccag
ccacagcttaaccaaacccttcttgggcaacagccacagcttagtccatctttacttggc
cagcaagcccaacccaacccagctttgttaggtcattccccacagcttaacaaagctctg
cttggtcaacactcacaacagaatcaacatggacagcaaagtcaaggtagcccaagtaca
ttggaacaacagcagactaagagaacaaggacaagaatctctgaagagcagctgtctgtt
ttaaggaaacactttgatattaatagtcttcccagtgatgaagagatcaacaaaatgtct
tctttgtcgggtttgcctcacaaagtaattaaacactggtttcgcaacacgttatttaaa
gaacgccagcgagacaaagattctccttacaattttaataatccccctaccacagccctg
gatgattttagagaagacataacaatgaagcagagtttgaccctttctccatgttcactt
tctccagacctctcagcaaactcttcccctcaaccccagatgacagaggaacctcaaaga
ggcagacgctcttcccgaactcgttttacagagcaacagctggagaccctgcagggagta
tttgaggccaccccttaccccagagaggaagaatatgacagattatctgctctcttgtcc
cttccaaacagagttattgttgtgtggttccaaaatgcacgacaaagagctcgcaaaaat
caagaccgtggaacagatgatggattagaggagaaaagcaatcttgaaaacatcaacaga
caaataaatggttgtcaagtgactgatgatgatcatcaggataatagctttgaggatgaa
gaacaaggtgaccatcataacgaaaattccatggatttgacctatgagtattacacccac
cctgattccccttccctcaattcttccattcactgctcagaaagtgaccatcaaacatcc
gatggtgaacaaacatctgctacaaagaaacaagaagtaaaaataacttctactcaagct
aacatgggaccagcttctgggaacactcaaaatagtagtttagctgaagatatgcaacag
aaagaggtctttcagtcattgaaaacagcatctgaaacaccacctcaaagcccaacagaa
atggcccagaattgggctgcatcctcttcacaaactagttctataccaatcttgtctaag
gctaaatctgaccatggaaaagcttgcagtcctttaagagttcaaccctctgaaaaagag
gttgacccatcatcaagctcctcctctgctctaaaatcagaaaaaattccatcatggaca
cctgatgcaacaacgtgcctatcaaccgaaacccagccacaagccgtcactcaatttcag
tgtagtctctgcccattgactttgccatccttccaactatggcaagagcatcaaactaga
catcttcttactgctcagtcccaggtacaacttctacactctggattcacggaccgaccc
atgccttacatgatgcttcatcctaacccatctttaatggcaagtcaaatgctttcaggg
gccatgtcccagatacatcccaatcccacacatccaatgatttcacacttgaacaacatc
caaattaagaacactttctctgatcactctagtaacactcctaacaattccctgaaccta
acaaagcagagtacaaaacatgtatcagacactagttttgaaggtcaaagaggcaatagg
gaggttgatgaggagcacaggagggataaacgtcagagaaccaccatcactccagaacag
cttgaagtgttgtatcaacgatacagtttggactctaaccccaccagaggagtccttgag
agtattgcacgagatgttggtctcacaagacgtgtagttcaggtctggtttcagaataca
cgggcaagagaaagaaaaggacagtttcggtcaatgggaccaggatcaagcttcaccttg
ggcctgaaccacctgcgctgtccattttgcagggctcttttcaaagttaggagtgctctt
gatgcccatatgagatcacgtcactgggcagaggctgaaagagcaggttataatctgtca
ataagcaatggatccaatggacagagtgggataggattgacatctgccacagacagacca
ggtccatctatcccctctgctcctatccacaatcccgaaaatgacaggagcaacaaagag
tttagccccaagccaccagggtcttcttactgttcatccaccaacctgaaaaacccagaa
gaggatgaggaatatgaggatgatgatgatgatgactacccttgtgaggagagttctagt
atggctgaccaagattctccaagtcctgaaatagcaggggatcaaagttcagatatgagt
gagacacaaagtcagcagtaccaccattaccatcagcagcagcgccaaaggacacagatg
agccacttccaggtacttcagcttaaaaccttctacaggaaccaccgcacaccaaaccgc
cttgagtgtgagactttggggcgggagctggggttgcctccacgtgtggtccaagtgtgg
ttccagaatgccagagctaaagagaagagagccaggagcctgacctctgacactgctgag
agagaaccagctgagctttcatctaggacaggagagagagacagagcttaa
DBGET
integrated database retrieval system
