Cyprinodon variegatus (sheepshead minnow): 107092149
Help
Entry
107092149 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: centromere protein F-like
KO
K11499
centromere protein F
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107092149
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
107092149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CENP-F_N
CENP-F_leu_zip
CENP-F_C_Rb_bdg
Crescentin
GAS
ATG16
Fez1
Tropomyosin
DUF724
HALZ
Motif
Other DBs
NCBI-GeneID:
107092149
NCBI-ProteinID:
XP_015241952
LinkDB
All DBs
Position
Unknown
AA seq
2790 aa
AA seq
DB search
MSWAVEEWKDGLPGKALQKIQEMEVQLDKLKKERTQKQFQLDSLEAALQKQKQKVDSERS
EISALKRENQSLVESCDSLEKSRQKVVHELGVKEQQVSYLEGQLNSCRKTIERLEQELKK
YKNELDRSQPAGSSSLSSSSSDLQAYSTPQKSFAMPAPVPAHRQQDNKLDDLQEKLNREV
DERKKLESELKVLQVKLLNQSSVSVSHKDIAARQAGSSIFPWQQQDQVHCLRAQDKMETP
LKRRGASLWDAHEETPIKPSHRMSSSIAVQSPSGPSQHMEQMKTLNQELRGRVSELERNI
SAQEKEIRNNTSKLQELQAHLNQARKDLAERDRDLAKAGHELSQAADKHQQLEAKCSSVE
QKLKQVSEEMSCQRHNAESCRRALEQKLKDQERNSQKELAQLQSSNQALDLELNQTRTKL
TQEIQQAKKDHNVLQADMEKMRIQKSQMERELEEQKQKLLRSEQSLQAAQTKEQDLRKKM
EELQKEKNCVTVQLDRSTRSISQLEEEKRSSEQKLRSTQGLLEDLKAKSEGQEVELKRLQ
SKLEQQAQTSARELENMKRTISDVESRNEKCQNELQKQRQESERLSNKLNGVEKESQELK
SSLTGSQDECKALKQEHQALLDWKKEKEDLINQTEAVQKELTDKIITLEGNLNLMNEANR
ENQSKISSIEADKAGLSAHIDSLKGQLLIKSTELEEKEHQYQQLQLQVTEAEQKHSKDLE
NVGKQLAQLEGQLNELKSQLQRETIRAELAEKTISELQEEQQAACDLLHSKDQLVELGLA
EISQLKESLAQSTAQQEKLNASFVEEKAALLMQCEDSVSAKAEETERIKLQMEEVQQELL
LSRNKITSIEQMLKVQEQLGAELQKQINTMSNKEEELMKMCEEKSEQLRQSEEQLKEQRS
LKEETEKQLRESEARIVSMETEKSELNSQIEEIQKKAEFLQHSQAEKINTLLEQIVALEK
QAAANQEAADEVPVLKNKLDMVNQSLAHLNKSTEALEENLCSANEKKADLEAALSEKTKL
ISALEDQIKNLTEKMLKETESHSAKIEDLINRERILKEQLEGTKNSLAAATAESSSHQEE
IQTMNTALSTALRGLEEKDNSIKSLKEKLNRAEAEHSKASELLKEKSVAMNKIKVQLEML
QMDLEDNETAMNSVESQVEELKGTKASLEAQISDMEAMLQESKAQVSVLESRLDEVQSQN
SMLETKYVTAKEELLERSCEITRLEEDAVKRQQLEENVASLESKLSLVTEENTKLEETLQ
QIIQKKESSLNRLSEEKSSLEVSLRQLLDEQKQTATEITQVKAEKEELQERVNSLSEEIQ
RLHTTVGELSEQKQEAEAEIDRIAAERRETESAFSLAAEEKAMLDVTVGLLNSEKAELQE
KLFTLTSEKGDLVSTMKQMEEEKHQLESNYSRVSEENVQLLSEIAQLSEEKQQLQASAER
MKEELASFREESKRVQSSLLCSEEERQKLKEQLYVREEIINQENKERTQQFETEQAELHQ
RLSSLQAELTVLQQNYSLLLEETDQQHRRIQQLTESRKCPNPAENLTHIGPNDQEEMVDG
AVCAEPNPELDPNIITSTESNPQSEPSSDQAFSEEEMMRKEEASDQEVLRDELEEEVSGE
NSGAGEVLGSENLNCDPSFPKSLKFFGLKSSPVRDGISSNTEIGSEVELLRSELDLLTSE
LQLRAELSSELKVQIYNLEMKVHAAEEQAQNAAKQLSIAREEKKSLSNEVAHLLEEREAL
TLQLQTSKCQLTDVMEMLEGLEMAKGGWDEKFLQQANELKRVRSEKANLEKHILGMESEL
ETMQAERDRLKEEMETQRKTCSGLKQQVETLHVETTQLRAELVSCTEDKEELNQSLAQWR
DKVHSLEKTNCDTRNLISILEVDIRTGRKEYEALQSSMKGVEAEREQLLQQVSALEEVIS
KEIGEKEELLNRLSEMREDHTSTNQNTESMAGKIQALEREVCSLSQSLESSLLEKGEIAS
RLNSTNEEVQQMRTGIEKLQVRIESDERKKKKMGELLKAAQIKSDSLQDRIDALEREKDE
LEQNLEDAVLQAETAKAELEEEKRKVEEEKEELTEKLSELCATLESLRSEKALLEMELDN
KNMEIEELKAARDKLERGLEKAEMDRREEQERQKYRLEEMEKLTREEAERQSVQVGDLQG
KLEASLQRETTLEQKFADSVREKEKMQSAMIELEKEKQSLLISQDLQTEMERENTNLKAN
VESLGEEIKDLQTLLQAKEEEIHTLEKEKGLEAEQRQALDETISSVRAEKRQLEERMDQL
EQERDELQSTLVSVLQEKGRLDQERTELDEERVQLRSKVSSIEKEKQDLQQTLSSLEQGK
LRLEAATQQLQSSLMMIEQEKSNLSSALSHLEEEKAQESGDRERIIQERQTLQQKVASME
KELETCQQSISQLSEQVSELTSSTARLSKERDSALSKINLWMKTCRQLEQEKLNLVNSSE
VDSSNEELQAEVTQLRAEEEDRKKELEELKSALKKEKMEAEKRQQSFIEKDKEVKERTAA
LKEIRREMEEKERELEGIRKELDEVNRLLEEKSTEADESIDKYCSLLVKVHKLEESNDVL
KLRLEQVTSSRCPNEAKIPSETRRCSARRSSSKHQEEKNNENTENAVVHTVASSPQGSFQ
GKRCHKEISDRDSVQEALHNLTKKLKANGMTPRPRGEQQDEEFRPEGLPDLVQKGFADIP
MGEASPYIIRRTTGRRCSPRLAARQTHADIKVLGPIQTPPGSSAETPGRTRLPLHSEQKP
LHSPLNLEMEPEKKQVLVEQTKQGENCHVQ
NT seq
8373 nt
NT seq
+upstream
nt +downstream
nt
atgagctgggcggtggaggagtggaaggatggacttccagggaaagccctgcagaagatc
caggagatggaggtccagctggacaaactcaaaaaagaaaggacacagaagcagtttcag
ctggactccctggaagctgcgctgcagaaacagaagcagaaggtggacagtgaacgctca
gagatatctgctttgaaaagggaaaaccagtcgttggttgaatcgtgtgactctttggaa
aaaagtcgtcagaaggttgttcacgaacttggtgtcaaagagcagcaggtgagctacctg
gagggtcagcttaattcctgcaggaagaccatagagcgactggagcaagaactcaagaag
tacaaaaatgagctggatcgctctcagcctgctggctcctcctcgctgtcgtcatcctcc
tctgacctgcaggcgtacagcactccacagaagagcttcgcaatgccagcacccgtccct
gcacatagacagcaagacaacaaactggatgacctacaggaaaagttaaaccgtgaagtg
gacgaaagaaaaaagctggagagtgagcttaaagtgctgcaggtcaagctgttgaatcag
tcttcagtcagcgtcagccacaaagacattgcggcacgtcaagccggatcgtctatattc
ccatggcaacagcaggatcaggtccactgcctgcgcgctcaggataagatggaaactccg
ctgaagagacgtggggcgtctctgtgggacgcacacgaggagacgccaatcaaacccagc
cataggatgagttcttccatagctgtccagagtcccagtggaccctcccaacacatggag
cagatgaaaactctcaaccaagagctccgtggacgtgtgtcagagctggagaggaatata
tcggctcaggaaaaggagatccgtaacaatacgtcaaagctgcaagaactccaagcgcac
ctaaaccaggctcgtaaagacctggctgagcgggacagagacctggccaaggccggacat
gagctgagtcaagcagctgacaaacaccagcagctggaggcaaagtgttcatcggttgag
cagaagttgaaacaagtctcagaggagatgagctgccagaggcacaacgctgaaagctgc
agacgagctctggagcagaagctcaaagaccaagaaagaaacagccaaaaggagttggct
cagcttcagagttccaatcaggctttggatttggagctcaaccagactagaaccaaactc
acccaggagatccaacaggccaaaaaagaccacaatgtgctccaagcagacatggagaag
atgcgcatacagaagagtcagatggagagagagctagaagaacagaagcagaagctgctg
cgctcagaacaaagcctgcaggccgctcagaccaaggagcaagacctccgcaaaaagatg
gaggagctacaaaaagagaagaactgtgtgactgtccagttggaccggagcaccaggtcc
atttctcagttggaagaagagaagaggagctcggagcagaaactcaggagcacccagggg
ctgctggaggatctgaaagccaaatccgaaggacaggaggtggagctgaagaggcttcag
tcaaagctggagcagcaggctcagacatcagcaagggagctggaaaacatgaagagaaca
atttctgatgtggagtccagaaatgaaaaatgtcagaatgagctccagaagcagcggcag
gagagcgagaggcttagcaataagctgaacggtgtggagaaggagagccaagagctgaag
agcagcctcactggaagccaggatgagtgtaaggctttaaaacaagaacatcaggctctg
ctggactggaagaaggaaaaggaggacttgataaaccaaaccgaggctgtgcagaaggag
ctcactgataaaatcattactttggaaggcaacttgaatctgatgaacgaggccaatcgt
gaaaatcagagcaagatctcctccatagaggcagacaaagctggtctgtcagcccacatc
gactcactgaaaggacagctcctcatcaaaagcacagagctggaggagaaggagcaccag
taccagcagcttcagcttcaggttaccgaggcagagcagaaacacagcaaagacctggag
aatgttgggaagcagctcgctcagctggaaggacagctcaatgaactgaagtcccagttg
cagagggaaaccattcgagctgagcttgctgagaagacgatctctgagcttcaggaggag
cagcaggcagcatgcgacctgcttcactccaaagatcagctggtggagctgggcctggct
gagatcagtcagctgaaggaaagtctcgctcagtccactgcacagcaggagaagctaaat
gccagctttgtggaggagaaggccgccctcctgatgcagtgtgaggacagcgtttctgca
aaggctgaggagacagagcgcatcaagctgcagatggaggaagtccagcaggagctgctg
ctctccagaaacaagatcacttccatagagcagatgctgaaggtgcaggaacagctgggg
gccgagctgcagaaacaaatcaacacaatgtccaataaggaggaggagctcatgaagatg
tgcgaggagaaatcggagcagctcagacagtcagaggagcagcttaaagagcagaggagc
ctgaaagaggagacggagaagcagctcagagagagtgaagctcggatcgtctccatggaa
acagaaaagtctgagctcaacagtcagattgaagagatacagaaaaaagcggagttcctg
cagcacagtcaggcagaaaagataaatactctcctggagcagatcgttgctttggagaaa
caggcggctgcaaaccaagaagcagcagacgaggttccagttttaaagaacaaactggac
atggtcaatcagtcccttgctcacctaaacaaatctaccgaagctttagaagagaacctc
tgctctgcaaacgaaaagaaggccgatctggaggccgccctgtctgagaaaacaaaactc
atctctgctttggaggatcaaatcaaaaatctgactgagaagatgctgaaagagacggag
agccacagcgcgaagattgaagacctgatcaacagggagagaatcctaaaagagcagctg
gagggtaccaaaaattccctagcagcagccacagccgagtccagctctcatcaggaggag
atccaaaccatgaatactgctctatctaccgcattgcgcggtttggaagagaaagacaac
tcaataaagagtctaaaagagaaactgaacagggcagaggctgagcacagcaaagcctct
gaacttctgaaggagaagtctgtggccatgaacaaaattaaggtgcagctggaaatgctg
cagatggacctggaggacaacgagactgccatgaactctgtggagagtcaggtggaggag
ctgaagggcactaaagcatcgctggaggcccagatctctgacatggaggccatgctacag
gaaagcaaagctcaggtgtctgttttagaaagccgtttggatgaggtccaatcccagaac
tctatgctggagaccaaatatgtgacagccaaggaggagctgctggagaggagctgtgag
ataacgcgcctggaggaggacgccgtgaaacggcagcagctagaggagaacgttgcctct
ttagaatccaaactgagtctggttactgaagaaaatacaaagttagaggaaacactgcag
cagatcatccagaaaaaagagagcagcctgaatcggctaagtgaggagaaaagcagcctt
gaggtttctttgaggcagttactggatgagcagaaacaaactgctactgaaataacccag
gttaaagctgagaaggaggagctgcaggagagggtgaacagcctgtcagaggagatccag
cgactccacactactgtcggagagttatctgagcaaaaacaggaggcggaggcagagatt
gatcggattgctgcagagagacgtgagactgagtctgcattcagtctggccgctgaggag
aaagccatgctagatgttactgtgggtttattgaacagtgaaaaggctgagcttcaggag
aagctttttacattaacctctgagaaaggggacttggtcagcaccatgaaacagatggaa
gaagagaagcatcagctggaatccaactacagtcgagtctctgaggaaaacgtccagctg
ctgtcagagattgcccagctgtctgaggagaagcagcagcttcaagccagcgctgagagg
atgaaagaagagctggcttcttttagagaggagagcaagcgtgtgcagtcctccctgcta
tgctcagaggaggagcgacagaaactgaaggagcagctctacgtgagggaggagattatc
aaccaggagaacaaagagcggacccagcagtttgagactgagcaggcggaacttcatcag
aggctctcaagcctccaggcggagctgaccgtactccagcagaactattccttactgctt
gaagaaacggaccaacagcaccgccgcatacagcagcttacagaatcgaggaaatgcccg
aatccagcagaaaacctcacccatattggacccaatgaccaggaagaaatggtggacgga
gctgtatgtgccgaaccaaacccagaactggacccaaacatcattaccagcacagagtcc
aatcctcagagcgagccgagctcggatcaggctttcagtgaggaagaaatgatgaggaag
gaggaggcctctgatcaggaggtgctcagagatgagttggaagaggaggtctctggggag
aacagcggtgctggtgaagttctgggaagtgagaatctaaactgtgatccatctttccca
aaatccttgaaattctttggactcaagtcttcaccagtcagagatggcatcagctctaac
acagaaattgggagtgaagtggagttgctgcgctctgagttggacctgctgacctcggag
cttcagctgagggcagagctgagctcagaactgaaagttcaaatttacaacctggagatg
aaggttcatgctgcagaggagcaagctcagaatgcagctaaacagctgagcattgcccga
gaggaaaagaagagcctttctaatgaggtggcccacctgctggaggagagggaggctttg
actctgcagctgcaaacgtcaaaatgccaactgactgatgttatggagatgttggaaggg
cttgagatggccaaaggtggatgggatgaaaagttccttcagcaggcgaatgagttaaag
agggtccgctctgaaaaggctaacctggagaagcatatcctgggaatggagtctgaactg
gagaccatgcaggcagaaagggacaggctgaaggaggagatggagacccagaggaagact
tgttcaggattgaagcaacaggtggaaacactccatgtagagacgacccagctgagggct
gaacttgtgtcctgcaccgaagacaaagaagagttaaatcagtctttagcacagtggaga
gataaagttcacagtttggagaagaccaactgtgacaccagaaatttaatttccatcctg
gaggttgacatccggacgggaaggaaagagtatgaagctcttcaaagcagcatgaaggga
gtggaggcagagagagagcagcttttgcagcaggtttcagccctggaagaagtcatttct
aaagagatcggcgagaaagaggagctgctcaaccgtctcagtgagatgagagaagatcat
acctctaccaaccaaaacactgagtccatggctggaaaaatccaggctttagagagggaa
gtctgcagcctttcccaatcgctggagtcttctttgctagaaaaaggagagattgcctct
cggttgaattccactaatgaagaggtccaacagatgaggacgggcatcgaaaagctccag
gtccgcatcgagtcggatgagaggaagaaaaaaaagatgggagaattactcaaagctgct
cagatcaagtctgactcactgcaggatcgcattgatgctctggagcgagagaaggacgaa
ctggagcaaaatctagaggacgctgtgctgcaggctgaaacggcaaaagctgagctagaa
gaagagaagagaaaggtggaggaagagaaggaggagctcactgagaagctatctgagctc
tgtgctacgctggaatccctgagatctgagaaagctcttttagagatggagctggacaat
aagaacatggagatagaggagctgaaggcagctagggacaaactggagaggggactggag
aaggcagagatggatagaagagaggaacaggaaaggcagaaatacagactggaagagatg
gaaaaattaacaagagaggaggctgagagacaaagtgtgcaagtaggagaccttcagggt
aagctggaagcttctctgcagagagagaccaccctcgaacaaaagtttgcagactctgta
cgggaaaaggagaagatgcagtcagcgatgatagagttggagaaagagaaacaaagtctg
ctgatctctcaagatttgcagacagagatggaaagggaaaacactaacctgaaggcaaat
gtagagtctttaggtgaagaaatcaaggatcttcaaacacttttacaggctaaagaggaa
gaaatccataccttggagaaggagaaaggccttgaggcagagcagaggcaagctttagat
gaaaccatatcatcagtcagggcagagaagcgacaactggaggaaagaatggaccaacta
gaacaggagagggatgaacttcagtccacactggtgtctgttcttcaggagaaaggaaga
ctagaccaggagagaacagagctggatgaagagagagtacagcttcggtcaaaggtctca
tctatagaaaaggagaaacaagacctccaacaaaccctctcctcattagagcagggcaag
ctgaggttagaggctgcaacacaacaattacagtcctccctgatgatgatagagcaagag
aagagcaacctatcctcagctctatctcacctggaggaggagaaggcgcaggagagtggg
gacagagagagaatcatacaagaacgtcagactctgcagcaaaaagttgcttccatggag
aaagagttggagacgtgccagcagtccatctcacagctcagtgagcaggtctctgagttg
acgtccagcactgctcgtctgtctaaagagagagactctgctctgagcaaaatcaacctc
tggatgaagacctgcaggcagctggagcaggagaaactcaacctcgtgaacagctcagaa
gtggatagtagcaatgaggagttacaggctgaggtgacccagctgagggcggaagaagag
gatagaaagaaagaactagaagagctgaagagcgccctgaagaaggagaagatggaggct
gagaaaagacaacaaagttttatagaaaaagacaaagaagtgaaggagcgtacggctgcc
ctgaaggaaattagaagggagatggaggagaaggaaagagagctagaggggatcagaaag
gagctggatgaagttaacaggcttctggaggagaagagcacagaggctgacgagagcata
gataaatactgcagcctgctggttaaagtccataagctggaggagagcaatgatgtgctg
aagttacgactggagcaggttacttcaagccgatgtcctaacgaagccaagatcccctcg
gagactcgccggtgctcagcaagacgttcttcctctaaacatcaggaagaaaaaaacaat
gaaaacacagagaatgcagttgttcatacagtagcaagctctcctcagggatcctttcag
gggaaacggtgtcataaagaaatcagtgacagagacagtgtccaggaggcgctacacaac
ctgacaaagaagctcaaagccaacggcatgacacccagaccaagaggtgaacagcaggat
gaagagttcagaccagagggcctgcctgacctggtgcagaaagggtttgctgatattcct
atgggagaagccagtccatatatcataaggaggaccacagggcggcgctgcagtcctcgg
ctggctgcaaggcagactcatgctgatataaaggttttggggcctatccagactcctcct
ggttcatcagcagaaacccctggcaggacacgcctgcctctacatagcgaacagaaacct
ttgcattctccactgaatttagagatggaaccagaaaagaagcaagttttagttgagcaa
acaaaacaaggagaaaactgtcatgttcagtag
DBGET
integrated database retrieval system
