Cyprinodon variegatus (sheepshead minnow): 107092984
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Entry
107092984 CDS
T06110
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04150
mTOR signaling pathway
cvg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107092984 (lrp6)
04150 mTOR signaling pathway
107092984 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107092984 (lrp6)
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107092984 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
cEGF
Motif
Other DBs
NCBI-GeneID:
107092984
NCBI-ProteinID:
XP_015243232
Ensembl:
ENSCVAG00000020775
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MRMSFRILLLFGSCWLISGEPLLLYANRRDLRIVDVAHEKANATVVVGGLEDAAAVDYVY
AQGLIYWSDVSEEAIKRTFFNQSGASAAETVVPGLAAPDGLACDWLGKKLYWTDSDTNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEVPKIERAGMDGTNRSMIIDK
DIHWPNGLTVDYGQQKLYWADAKHNFIHRSNLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKQTGREQRIVHSHIFSPMDLHVFSPKRQPVVRSSPCSQSNGGCSHLCL
LSPNRPFYRCACPTGVQLLEDEKTCRDGATQMLLLARRTDLRQISLDMPDFTDIILQVDD
IRHAIAIDYDPVEGYVYWTDDDVKAIRRSFLDGSDAQFVVTSQVNHPDGIAVDWIARNLY
WTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDG
MERVVMVNTSLGWPNGLALDYDERKIYWGDAKTDKIEVMNMNGTGRRVLVEDKLPHIFGF
SLLGDYIYWTDWQRRSIERVHKHTADREFIIDQLPDLMGLKATRVHESFGTNACVENNGG
CSHLCLNTPHGVHCGCPNGLELIADMQTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPL
TGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVQFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAM
DGTGRITLVSDVGRANGLTIDYAERRLYWADLDTTLIESSNMLGQEREVIADDLPHPFGL
TQYQDYIYWTDWSHRSIERANKSSGQNRTLIQGHLDYVMDILVFHSSRQAGWNACASTNG
HCSHLCLAVPSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKAAINRMVIDEQQSPDIVL
PIHNLKNVRAIDYDPLDKQLYWIDSKQNIRRSQEDGNQSVTVVSSSWLGHGPGLQLYDLS
IDIYSRFIYWTSEVTNVVNVSRTDGSRVGVVLRGEHDKPRAIVVNPEKGYMYFTNLQDRS
PKIERAALDGTEREVLFFSGLGKPAALAIDNQAGKLFWVDSDLRRIESSDLSGANRIVIA
DSNILQPVGLTVFGNHLYWIDKQQQMIERIDKNTREGRTKVQARVAYLSDIHAVHEIDMQ
EYRNHPCTKDNGGCSHICIVKGDGTTRCSCPVHLVLLSDELTCGEPPTCSPLQFACLSGE
VDCIPNTWRCDGYPECEDGSDEKDCPVCSDLEFQCDSRQCIELSLRCNGEVNCQDGSDEN
KCEVRCPAEQFSCSNGQCIGKHKKCDHNMDCSDNSDEIGCYATEEPPAPTNSTISSIVAV
VMALFVVGAIYFVCQRVLCPHMKDDGETVTNDFVVHGQSSVPLGYVPHPSSLSSSLPGMS
RGKSVIGSLSIMGGSSGPLYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQYTL
EFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRPLKSAAAAKGYTSD
LNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtcttttcggatcctgctgttatttggttcctgctggctcatttcaggcgag
ccgctgctcctttacgccaaccgccgggaccttcggatcgtggatgtggcgcacgagaag
gccaacgccacggttgtggtgggcggcctggaggacgccgccgccgtggactacgtttac
gcccagggcctcatctactggagcgacgtcagcgaggaggccatcaaacggacctttttc
aaccagtccggcgccagcgcggccgagaccgtggtgccgggcctggccgccccggacgga
ctggcgtgtgactggttagggaagaaactgtactggacggactcggacaccaatcggata
gaggtggccgaactggacgggtctttgaggaaggttctgttttggcaggagttggaccag
ccgagagcgatcgccctggatccagaacgagggttcatgtactggacggactggggggag
gtccctaagatcgagcgggctgggatggatggaaccaaccgctccatgatcatcgataag
gacatccactggcccaacgggctgacggtggactacggccagcagaaactctactgggcc
gacgccaaacacaacttcatccaccgctccaacctggacggatcctccagggaggtggtg
gttaaaggggagctgcctcaccccttcgccctcaccctgtacgaggacacgctgttctgg
accgactggaacacccactccatccactcctgcaggaagcagacgggtcgagagcagcgg
atcgtccactcccacatcttctcccccatggaccttcacgtgttcagccctaagagacaa
cccgtcgtgaggagcagcccctgttcccagagcaacggaggatgctcccacctctgcctg
ctgtcccccaacaggcccttctatcggtgcgcctgtcccaccggagttcagctgctggag
gatgagaagacctgcagagacggtgccactcagatgctcctgttggcccggcggactgac
ctgaggcagatttctctggacatgcccgacttcactgacatcatcctacaggtggacgac
atccggcacgccattgccatcgactacgacccggtggagggatacgtttactggacggac
gacgacgtgaaggccattcgccgctcgtttctggacggcagcgacgctcagttcgtcgtc
acctcccaggtgaaccatcccgacggcatcgccgtggactggatcgccaggaacctatac
tggaccgacacgggaacggatcgcatcgaggtgacccgactcaacggtaccatgaggaag
atcctgatttccgaggacctggatgagccgagggcgattgttctggaccccgtggccggg
tatatgtactggacggactggggtgaggtgccgaagatcgagcgggccgacctggacggg
atggagagagtggtgatggtgaacacttctctgggctggcccaacggcctggcgctcgac
tatgacgaacgcaaaatctactggggagacgccaagacggacaagatcgaggtcatgaac
atgaacgggacgggccgacgggtgctggtggaggacaaacttccccacatctttggcttc
agcctgctgggcgattacatctactggacggactggcagcgccgcagcatcgagcgcgtc
cacaaacacaccgccgacagggagttcatcatcgaccagctgccagacctcatgggcctt
aaagccacgcgcgtgcacgagtcctttgggaccaacgcctgtgtggagaacaacggcggc
tgtagtcacctgtgcctaaacacgcctcacggcgttcactgcggctgtcccaacggcctg
gagctcatcgccgacatgcagacctgcatcgtcccagaggccttcctgctcttctcccgc
cacaccgacatccgccgcatctccctggagaccaacaacaacaacgtggccatcccgcta
accggcgtgaaggaggcctcggcgctagacttcgatgtcaccgacaaccggatctactgg
accgacatcactctgaagaccatcagccgggccttcatgaacggcagcgctctggagcac
gtggtccagttcggcttggactatcccgaggggatggcggtggattggctggggaagaac
ttgtactgggccgacaccggcaccaatcgcatcgaagtggccaagctggacggacagcac
cggcaggttctggtctggaaggatctggacagtcccagagctctggctctggatccagct
gaggggtacatgtactggaccgagtggggcgggaagcccaagatcgaccgggctgccatg
gacggaaccggccgcatcacgctggtgtcggatgtcggccgcgccaacggactgaccatc
gactacgcagagcggcggctctactgggccgacctggacaccaccctgattgaatcgtcc
aacatgctcggtcaggaacgcgaggtgatcgccgatgacctcccccaccccttcggactc
acccagtaccaggactacatctactggacggactggagccaccgcagcatcgagcgggcc
aacaagtcgagcggtcagaaccggaccctgatccagggccacctggactacgtgatggac
atcctggtcttccactcctccagacaggccggctggaacgcctgcgcctccaccaacgga
cactgctcccacctctgcctcgccgtgcccagcagcttcgtctgcggatgccccgcccat
ttctccctgaactacgacaacaagacgtgcagcgctcccacatcgttcctgctcttcagc
cagaaggcggccatcaaccggatggtgatcgacgagcagcagagcccggacatcgtcctg
cccatccacaacctgaagaacgtccgcgccatcgactacgacccgctggacaagcagctg
tactggatcgactccaaacagaacatccggaggtcccaagaggacgggaaccagagcgta
acggtggtgtcgagctcctggctcggacacggaccgggccttcagctgtacgacctgagc
atcgacatctacagccgcttcatctactggaccagcgaggtgaccaacgtggtcaacgtg
agccggacggacggcagcagagtgggcgtggtcctgcggggcgagcacgacaagccgcgg
gccatcgtggtcaacccggagaaagggtacatgtacttcaccaacctgcaggaccgctcg
cccaagatcgagcgggcggctctggacgggacggagcgggaggttctgttcttcagcggg
ctgggtaaacccgccgctctggccatcgacaaccaggcggggaagctgttctgggtggac
tcggacctgcggcgcatcgagagcagcgacctgtccggagccaatcggatcgtgattgct
gactcgaacatcctgcagccggtgggcctgacggtgttcgggaaccacctttactggatc
gacaagcagcagcagatgatcgagaggatcgacaaaaacacgagggagggccgcaccaag
gtccaggcccgggtcgcctacctgagcgacatccacgccgtgcacgagatcgacatgcag
gagtaccggaaccatccgtgtacgaaggacaacggcggctgctcccacatctgcatcgtg
aagggagatggaaccacgcgctgctcctgccccgtccacctggttctgctgtcggatgag
ctcacctgtggcgagccgcccacctgctcgcccttgcagttcgcctgcctgtccggcgag
gtggactgcatccccaacacctggaggtgcgacggttaccccgagtgcgaggacggcagc
gacgagaaggactgccccgtctgctccgacttggagttccagtgcgacagccggcagtgc
atcgagctgagcctgcgctgcaacggggaggtcaactgccaggacggctccgacgagaac
aaatgtgaagtccgctgccctgctgagcagttctcctgctccaacggtcagtgcatcgga
aaacacaagaagtgcgaccacaacatggactgcagcgacaactccgacgagattggctgc
tacgccacagaggagccgccggctccaaccaacagcaccatcagctccatcgtggccgtg
gtcatggcgctgttcgtggtcggcgccatctacttcgtctgccagcgggtgctctgtcct
cacatgaaggacgacggcgagacggtcaccaacgacttcgtggtccacggacagtcgtcg
gtgccgctcggatacgttccgcatcccagctctctgtccagctcgctgccaggtatgtcc
agagggaaatctgtgattggttctctgagcatcatgggcggcagcagcggcccgctgtac
gaccgcgctcacgtcaccggagcctcatccagcagctcgtccagcactaaaggcacctac
ttccccccgatcctgaacccgcctccgtccccggccaccgtgcgctcccagtacaccctg
gagtttggttactcctccaacagcccctccactcaccgctcctacagctaccggccctac
acctaccgccacttcgccccgcccaccacgccctgcagcaccgacgtctgcgacagcgac
tacacgccggggcgccggccgctcaagtccgcggccgccgccaagggctacaccagcgac
ctcaactacgactcggagcctttcccgccgccgccgacgccccgcagccagtacctgtcg
gcggaggagaactgtgagagctgcccgccgtctccttacacggagcgcagctactcccac
cacctgtacccgccgccgccctccccgtgcacggactcctcgtga
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