Cyprinodon variegatus (sheepshead minnow): 107094914
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Entry
107094914 CDS
T06110
Symbol
pdlim3
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107094914 (pdlim3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107094914 (pdlim3)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107094914 (pdlim3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
EURL
Motif
Other DBs
NCBI-GeneID:
107094914
NCBI-ProteinID:
XP_015246297
Ensembl:
ENSCVAG00000012870
UniProt:
A0A3Q2E434
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MPLNVVLDGPPPWGFRLTGGKDFNQPLTISRITPGSKASGANLCAGDIILAIEGVPAADM
LHCEAQSKIKECYHQLCLTVERNDSRLWSPRIVEDGRAHPFKVNLESQPQEYKPIGTAHN
RKAQPFVAAANLDDRRQVVTTSYNTPIGLYSSGNIQDAMEGQIRGLVHQKPESPRALTSI
EESDVYRMLQKDQDDPQEPRQSGSFKALQEFIDSDGTRPIVTRTVKAPTTKPPPPTGNLH
KLPVCDKCGNGIVGTVVKARDKFRHPGCFVCADCEVNLKQKGYFFVEGQLYCEIHARARM
RPPEGHDLITTFPSP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccacttaatgttgtcctggatgggccacccccctggggtttccgtctgacaggagga
aaggacttcaaccagcctttgaccatctccaggatcactcctggcagtaaggcatctggt
gccaacttgtgtgctggtgacatcatcctggccatcgaaggagtcccagctgcagacatg
ctgcactgtgaggcacagagcaagatcaaggaatgctaccaccagctctgcctcactgtg
gaaaggaatgactccaggctgtggtccccacggattgtggaggatggaagagctcatcca
tttaaagttaacctggagtcacaaccacaggaatataaacccatcggcactgctcacaac
cgaaaggcccagccgtttgtggcagcagcaaacttggatgacaggcgtcaggtggtcacc
acgtcctataacactcctatcggcctgtactcctcaggcaacatccaggacgccatggag
ggtcagatccggggcctggttcatcaaaaacctgagagtcccagagctctgaccagcatc
gaggaatctgatgtgtaccgaatgttacagaaagaccaggatgacccacaggagcctcgg
cagtctggatcatttaaagccctgcaggagtttatagacagtgatggcactagacccatt
gtgactcgcacagtgaaagcccccacgaccaaaccccctccgcctacaggaaacctgcat
aagctgcccgtctgcgacaagtgtgggaatgggattgttgggacagtggtgaaagccaga
gacaaatttcgccaccctggttgctttgtgtgtgctgactgtgaagtcaacctgaaacag
aaaggctatttcttcgttgaaggtcagctgtactgtgagattcacgctcgagccagaatg
agacctccagagggccacgacctcatcacgacatttccctctccgtag
DBGET
integrated database retrieval system
