Cyprinodon variegatus (sheepshead minnow): 107095569
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Entry
107095569 CDS
T06110
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04530
Tight junction
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107095569
09142 Cell motility
04810 Regulation of actin cytoskeleton
107095569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107095569
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
107095569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PH_10
PDZ_2
PDZ_6
PH_11
Motif
Other DBs
NCBI-GeneID:
107095569
NCBI-ProteinID:
XP_015247194
Ensembl:
ENSCVAG00000000261
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MGNTESQNREHALYSTGRGYLSRKHMSRSLRISNKQSRRSRHASSGKMEHRNSETSTRSS
STPSIPQSLADNGLEPFNETRNFPDFGSPIWVDRVAMSLRPVSFHNDLASPSVHMNTMRI
TLPGPTAEETQDEEVYTNEVKYIQQTLECSRETMSFKKRSKSADTWQDDSLEFSLSDVSQ
DNLTSTEEIIDMANEREFPDCEGHMQFSPTDSADRSNSLDELYSNTSPASRQTHGRYAKW
NDTNRSMGEEEDGKMLSPSEEDGTAYGAYTLPCRRSHCLSEGLSNLQATMCTSMQGRRAK
TIQDVTAGDGSEYEDSGIDGVMLEVEHQPRRYKTMSASFSVCSMHGRSVLVGSDSGSSSG
GGASEGVQGVYENFRQELQMSSCQTESLEEAGSALSDEQSTMSSAYQSDLLLSVVQGMVR
KAGKLAVKNFLVHKKNKKVESATRRKWKTYWVSLKGCTLFFYDTDGRSAIDNNSIPKHAI
WVENSIVQAVPEHPKKDFVFCLSNSLGDAYLFQTCSQTELENWITAIHSACATAVARQHH
REDTVRLLRAEIKKLEQKIDMDEKMKKMGEMQLSAVTDTKKRKTILEQIFLWEQNLEQFH
MDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLTMGRLGIFSVSSFHALVAARTESGVR
RRTQAMSHSCSKRKSRFSSLWGVDTTSKKKTKAHPTVSQVFADEEPEKKPVDRVFVDSVK
ENTKSEDGSVKSLPRANVDSDMWVPDHLTPSWVCLPNDQPVLNTIQPGDSALCVLESICK
THELDPTKHYLRLKFFIENQVQFYIPKPEEDIYDLLYKEIELCSKITKVIQFDRDESCMI
GYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKTAFS
QVSLALTVNTLPSVDRRQLCYLPPRRSDAAEDLYTDIFSQSQEEILDDGVGLLLESCGDS
PDDDSEIFSELDECRKSTEQVAAFCRSLHDMNPSECMSSSPSPDSPFPPTVTPRQLSDAD
KLRKVICELVETERTYVKDLNCLIGRYLTPLQKENFLTQDELDVLFGNLPEMVEFQVEFL
KTLEDGTRLVPDLERLESVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKA
KTDLNFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDV
AIKAMNKVASHINEMQKIHEEFGAVFDQLITEQSSEKKEVADLSMGDLLLHNTVTWINPP
VSLGKWKKEPQMATFVFKTAVVFVCKEESKQKKKIGGSHRVSVSSEEKDPFRFRHMIPTD
ALQIRSMSNTDGESSAMCEVVHTKSESEGRPERTFHLCCSSPESRKEFLKTVHSILREKH
RRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTIDTD
IVFDGDPEQQDLTSPQESDSVPPQQKDEQLAGDTDRWVEEQFDLEEYEDQEEMKETDILS
DDDDEFSQTPRALSEEAELESPLRALSLEVSETDSRKNLQSPAENKEPDEEKISDTEKSS
ITDNSGNQAEKDEVWVRRELSGSSSDSAT
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggggaacactgagagccaaaacagggaacatgccctctacagtaccgggcggggctat
ttgtcacgaaagcacatgtctcggtctctacgcatttccaacaaacagtctagacgctct
cgccatgcttcctcagggaaaatggagcacagaaattctgagacaagtactcgctcgagt
agcacgcctagcatcccacaatccctagctgataatggtttggaaccattcaacgaaaca
agaaacttcccagactttggaagtcccatttgggtggatcgtgtggccatgagtttgcgc
cctgtgtcctttcataatgatttggccagtccctcagtgcatatgaatacaatgcgcata
accttacctggtcctactgcggaagagacgcaggatgaggaagtgtacacaaatgaggtg
aaatatatccaacagactttagagtgctccagagagacaatgagcttcaaaaagagatca
aaatctgcagacacctggcaagatgacagcctcgaattctccctgtccgatgtcagtcaa
gataatttaaccagcactgaagagattatcgacatggctaatgagagagaattccctgac
tgtgaaggccacatgcagttcagcccgacagactctgcagacaggtcaaactcactggat
gaactgtacagtaacacaagcccagcctccaggcagacccacggccgctatgccaagtgg
aacgacaccaacaggtctatgggagaagaggaggatggtaagatgctgtcaccatcagag
gaggatggaaccgcatatggtgcgtacactcttccctgccgacgttcccactgcctgtct
gaaggcctgagtaacctccaagctacaatgtgcacgagtatgcagggcaggagggcaaag
actatacaggatgtcacggccggggatggcagcgaatatgaagacagcggaatcgatggg
gtgatgttggaggtagagcaccagcctcggcgctacaagacaatgtccgcctccttctct
gtctgttccatgcatggaaggagcgtgctcgttggcagtgacagcggcagcagcagtggc
ggcggtgccagcgagggtgtgcagggggtttacgagaacttccgtcaagaacttcaaatg
agttcctgccagacggagagcttggaggaagctggctccgccctgagcgatgagcagagc
accatgagctctgcctaccagtctgatttgttgctcagcgttgtccaggggatggtgcgc
aaagcggggaaacttgctgttaagaacttccttgtgcacaaaaagaacaagaaagttgaa
tctgccacaagacgcaagtggaagacttactgggtgtccttgaaaggctgtactctcttt
ttttatgacactgatggccgttcagctattgacaacaacagtattcccaagcatgccata
tgggtagagaacagtattgtccaagctgtgccagagcatcccaaaaaagactttgtgttc
tgcctcagcaattctttgggtgatgcttatctcttccagacctgcagccagacagagcta
gaaaactggatcacagccatccactcagcatgcgctactgctgtcgctcgccagcatcac
agagaggacaccgttcggctgctccgtgctgaaatcaagaagctggagcagaagatcgac
atggatgaaaaaatgaagaagatgggagagatgcaactgtcagctgtcactgacaccaag
aagaggaagacaattctggaacaaatcttcttgtgggagcagaacctggagcagtttcac
atggatctgtttcgctttagatgctacctggccagcttgcaaggaggagagctgcccaac
cctaagcgcctcttggccttcgcctctcgccccaccaagctgacaatgggcagactgggc
atattttcggtctcttccttccatgcactggtggcagctcgaacagagagcggagtgaga
cgcagaacgcaagcaatgtctcattcctgcagcaaacgcaaaagcaggttttcctccctc
tggggtgtagacactacctcaaagaagaaaacgaaagcccaccctacggttagccaggtg
tttgctgatgaagagccagagaaaaagccagtagatcgtgtttttgtggattctgtaaag
gaaaacacaaaatctgaagacggaagtgtgaaaagtcttcctcgagccaatgttgacagt
gacatgtgggtccccgaccacctcactccttcctgggtctgtctgccaaatgaccaacct
gtgttaaacactatccagccaggagactctgcactgtgtgttcttgaatctatatgcaag
acccatgagctggacccaaccaaacactacttgagacttaaattcttcatagaaaaccaa
gtgcaattctacattccaaagccagaagaggatatatacgacttgctgtacaaagaaatt
gagctctgctctaagataacaaaagtaatccagtttgacagagatgaatcctgtatgatt
ggttatgggttttctatctcagtggtggaggaggatggagttcaacaactttacatcact
gatgtgaaggctgggggattagcctttgcaaagggtctgaatgccggagatgaaattctt
caactgaatggaaaagactctcacagtctcaatttttcagacatgaagactgcattctct
caagtgtctctagctttgaccgtcaacactctgccttctgtggaccggcgtcagctttgc
taccttccaccgcgccgctccgatgcagcagaagacctttacaccgatatcttctcccaa
agtcaagaggagattctggatgatggtgtgggactgttgctggagagctgtggagacagc
ccggatgatgattcagagatcttcagtgagcttgatgagtgcagaaagagcaccgagcag
gtcgctgctttttgtcgcagtctccatgacatgaatccgtcagagtgcatgtcctcttcg
ccgagcccggactcacccttcccgcctaccgtgactcctcgacagctgtctgatgccgac
aagctccgcaaagtgatctgtgaactagtggagaccgagcgcacctatgtcaaagatctc
aattgtcttattgggagatatttaaccccgctgcagaaagagaacttcctcacacaggat
gagctggatgttctgtttggtaatttacccgaaatggtggaattccaggtagagtttcta
aaaactcttgaagatggaaccagattagttccagatctggagagactggagagtgtggat
cagtttaagaaaatactcttttctctaggaggctctttcttgtactatgcagaccgtttt
aagatctacagtgctttctgcgccagccacaccaaggtcccaaaggttcttgtgaaagcc
aaaactgaccttaatttcaaggcctttcttgatgagcgaaatcccaagcagcagcactcc
tccaccctagaatcctatttaatcaaacccatccagagggtgctaaaatacccccttctg
ctgagggagctctactccctgactgacccagacagcgaggaacactaccatttggatgtt
gctataaaggctatgaacaaggttgccagccacatcaatgaaatgcagaagatccatgag
gagtttggagcagtgtttgaccagctaatcactgagcagagcagtgaaaagaaagaggtg
gctgatctatcgatgggcgatctgctgctccacaacacagtgacatggatcaaccctcct
gtttcccttggaaaatggaagaaagaaccacagatggcaacatttgttttcaaaacagct
gtggtctttgtatgcaaagaagagtctaagcagaagaagaaaattggtggttcccatcga
gtttctgtttcctcagaagaaaaagatccttttcgattccgtcacatgatccccactgat
gcccttcaaataagatccatgtcaaacacagatggggaaagttctgctatgtgtgaagta
gttcacacaaaatccgagtcagagggaagaccagagaggacttttcacctgtgctgcagc
tctccggagagcagaaaggaattcctgaagacggtccactccatcttgagggaaaagcac
cgccgacagctcttaaagacggagagtttacccctgaaccagcagtatgtgccatttgga
ggaaagcgactgtgtgccctgaagggagcccgtccagccataaatagagccgcatctgcc
ccaactaggactctgggcagaagaaagctggtgcgcaaccgtttcaccatagacactgac
attgtttttgatggggacccagaacagcaggacctcacttcaccacaggaatcagactct
gttcctccgcagcagaaggatgagcagttggcaggtgatacagaccgctgggtagaggag
cagtttgacctggaagagtacgaagaccaggaagagatgaaggagacagacatcctaagt
gatgatgatgacgaatttagccaaacacccagggctctgtctgaagaggctgagctggag
agccccctgagggctttatctctggaggtttcagaaacagacagtaggaagaatctgcag
tccccagctgagaacaaggaacccgatgaagagaagatatcagacacagagaagagctcc
ataactgacaactctgggaatcaagcagagaaagatgaggtttgggttcgaagggagcta
tcaggttcatcctcagacagtgctacataa
DBGET
integrated database retrieval system
