Cyprinodon variegatus (sheepshead minnow): 107095625
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Entry
107095625 CDS
T06110
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107095625
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Others
Others
107095625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Big_2
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
107095625
NCBI-ProteinID:
XP_015247277
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MMETRYCFLLFFFSEWIYLFLLTTILGGTKAEVRCIPRCQLPLVAAMPGERRGLDQTYFD
AAPGEEYYGFGEESFSASGDEKEVAAELTVSAESSFKVQPRPEENETSGLQRDGDRQKLS
HPSLSPSGPNNASEERDIILNLTAFGRRGRRSAETWSGFRSQGIEDTSVSDQGDFQLTSS
TFALAGDTAHNQAMVHWSGQNSSVILMLTKFYDFNAGRVTESSLWRSTDYGTTYEKLNEK
VGTKSILSYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKYSLGFDILSLLFHPEQ
EDWILAYSHDQKLYVSVEFGRKWQLVHNNVVPNRFYWSRLGLDKDQGMIHLEITVAVGRS
QYITCKLQNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVSVSGQAVHYVSYKRKAFYPMK
LPKYTVPKDLQIISTDENQVLAAIQDWHQNDSYNLYMSDYRGLFFTLMLEDVVSTGGPED
NVMIDLYEVAGIKGVFLSNKVVENQVKTYITYNKGRDWRLLQAPTTDLQGNKVYCEQPYC
SLHLHLHVSENPYASGNIVSKDTAPGVIIASGVLGPELSNANVSIFITSDAGNTWREVFQ
EAYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFTSSPLYVDGVLGEPGEDI
LIMTIFGHFSHRSEWQLLKIDFRPIFERRCTSVDYITWQLDNEGEVCIMGMNDYGFERQL
DGSCTSAFWFVPSASTQDCITGDSFFNTTGYRKALSNNCTDGSLLKYSPRQQKCPSRAPR
GLQLFTSEGTFVATLGRNVTFLVFLEEGLGSMTSITVDFGDGTAISYVNISSIDDGVKHI
YNKVGIYQVSATAVNNLGFDKVLLYLHVSCQLEQVQLSAPLVVIKNKAVNFTATLRPSSV
GTVTYFWWFDNKTEPFVTLDAAMSFTFSKEGSHTVTVQAVAGNTVHQDRIRVAVYDYFRS
HPLVFSSNLDELNPGVSEWREDIGRVVKTCLVQVTGISEDQILVTVLAGLPTTAEVFIVP
ERRTRDRAMDEKWAHLDQLSQVLLSALNQDLIKFTLKPGLQVNVYATRLSPAPLVDGSDS
GHSGTAVIMLVSVVLMALAIFVIYKLKRKIPGMHTYSTEQPDKEQEVIPAVTSIAVPNPE
GDELTSLDHVDVQLDSKSRGYLPSHTDIKLSDEAPHVF
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacacgttactgttttttactgttttttttttctgagtggatatatctattc
ttattaactactatcttgggcggaacaaaggcggaggtaaggtgtattccccggtgccag
ctgccgcttgttgcggcaatgccaggggaaagaaggggtctggatcagacctattttgac
gcagctcccggtgaagaatattacggctttggtgaggagtcgttcagcgccagtggagac
gaaaaggaagtcgccgctgaattaacagtgagcgcagaaagttcattcaaagtacagccg
cggccagaggagaatgagacaagtggtctgcagagagacggcgaccgtcaaaaactttcc
cacccttctctgagtccttctggtcccaataacgcaagtgaagagagagatattatatta
aacttgactgcgtttggtcggagaggacgcaggagcgcagaaacctggtctggattcaga
agccagggtatagaggacacctcggtgtcagaccaaggggactttcagctcacaagttca
acatttgcactggccggggacacagctcacaaccaggcgatggtgcactggtccggacaa
aacagcagcgtgattctcatgttaacaaagttctatgacttcaacgctggcagagtaacg
gagagttcactgtggaggtcaactgattatgggaccacgtatgaaaaacttaatgagaaa
gtcgggaccaagagcatattgagctacctgtatgtgagtccaaacaacaaaagaaagatc
atgttactaactgacccagaggttgagagcagtctgctcattagccttgacgagggggcg
tcctatcagaaatacagcttaggctttgatatcctcagcctgctattccacccagagcaa
gaggactggatcctggcttacagccatgaccaaaagctctacgtctctgttgagtttgga
aggaaatggcagcttgttcacaacaacgttgttcccaacagattctattggtccaggctg
ggtttggacaaagaccaagggatgattcaccttgagatcactgtcgcagttggacggtca
cagtacataacttgcaaacttcagaactgctccgatggaaacaagggcaagcctttccca
ggatttataatcccaaactccctggtggtgcaggatgagtacgttttcatccaggtatca
gtcagtggccaggctgtccattatgtgtcatataaaagaaaagcattttacccaatgaag
cttcctaaatacacggtccctaaggacctgcagataatcagcacggacgaaaaccaggtg
ctggcagctattcaggactggcaccagaatgattcgtacaacctctacatgtctgactac
agagggctgttcttcacactaatgctggaggatgttgtgagcaccggtggtccagaggac
aatgtcatgattgatctctatgaggttgctgggattaaaggagtgttcctgtcaaacaaa
gttgttgagaaccaagtaaaaacttatatcacatacaacaagggcagagactggcgtctt
cttcaggctccaaccactgatctccagggaaacaaggtctattgtgagcaaccgtactgc
tcattgcatctgcaccttcatgtctcagagaacccttacgcctcaggaaacattgtcagc
aaagacacagctccaggagttataatagcatcaggtgtcctaggcccagagttaagcaat
gcaaatgtcagtatcttcatcacctctgatgctgggaatacctggagagaggtttttcag
gaagcgtacagcgtgtttttcctgaatcaaggaggatctctagtggccatccgacacaca
cctctgccaattagacacatttggctgagttttgatgagggcagaaactgggacaaatat
agcttcacctcctcgccgctctatgttgatggggtgctaggggagcctggagaggacatc
ctcataatgacgatatttggtcattttagccaccgatctgaatggcaacttctcaagatt
gacttccgacctatatttgaaagacgatgtacatctgtagactacatcacatggcagtta
gacaatgagggtgaagtatgcatcatgggcatgaatgactatgggtttgagaggcaactc
gatgggagctgcacctcagctttctggtttgttccttcagcatcaacccaagactgcatt
acaggggacagctttttcaacacaacaggatatcgtaaggctttgtcaaacaactgcaca
gatggaagtctgttaaagtacagccccaggcaacaaaagtgtcccagccgggctcccagg
ggtctccagctctttaccagcgaggggacatttgttgcaacactgggcaggaacgtcacc
ttcttggtctttctggaagagggtcttggctccatgacgagtataactgtggacttcggt
gatggaactgccatatcttacgttaacatcagttccattgatgatggggtcaaacacatc
tacaataaagttggaatctatcaagtttcagcaacagcagtcaacaatcttggctttgat
aaggtcctcctttacctccatgtatcctgtcagctcgagcaggtgcagctttcagctcct
ttggtggtcatcaagaacaaagcagtgaatttcacagcaacacttcgccccagtagtgtg
ggaacagtcacgtatttctggtggtttgataataagacagagccatttgtgacccttgat
gcagcaatgtcctttaccttctccaaggaaggaagtcacaccgttactgtacaggctgtg
gctggaaatactgtccatcaggaccgaatcagagtggcagtttatgattatttcagatct
catcctttggttttttcctctaatctggacgagcttaatcctggagtttccgaatggaga
gaagacattggcagagttgtgaagacctgccttgttcaggtcacagggatcagtgaggat
cagatcctggtcacagtgcttgcaggtttgccaactacagccgaggttttcattgtacca
gagaggaggacaagagacagagccatggacgaaaagtgggcacacctggatcagctttca
caagttctgctgagcgctcttaaccaggatcttatcaagtttacattgaaacctggacta
caggtgaatgtgtatgccacccggctgtctccagctcctcttgtggatggcagtgacagc
gggcacagcggcactgcagtcatcatgctggtctcagtggtgctgatggctttggcaatc
tttgtgatatataaattgaaaagaaagatcccaggcatgcacacttacagcacagagcag
cctgacaaagaacaagaggtcatccctgcggtgacctccatagctgtcccaaaccctgag
ggggatgagctgacctcactggatcatgtggatgtacaactggattcaaaaagcagaggc
tacctgccatctcacacagacatcaagctctctgatgaagcgccccatgtgttttaa
DBGET
integrated database retrieval system
