Cyprinodon variegatus (sheepshead minnow): 107095966
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Entry
107095966 CDS
T06110
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107095966
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107095966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Calcipressin
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107095966
NCBI-ProteinID:
XP_015247854
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MLMSTDVASLMLPVNRGIMDRDIETAAAGAHPNAAAGAAVVRGMKRGDPEPDAQTAAALT
DLAGAECKRPRIDGSGDIGQNNEPLNPGFHGYAPHSQGSQDSTGGQEGLVAPPFTTFPPP
PPPQNGLTGTEFGPGGMFGAAGQATAEVGAGGNGATNAPNSNNGKTEETSQGEAGAQCSA
GGTGAGGSAGDSGEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG
FGFVTFENSADAEKAREKLHGTQVEGRKIEVNNATARVMTNKKIVSPYPNGEALSTLPYA
GWKLSPMVGAVYGPEIYAVPGFPYPTAAAAAAATTAAAAFRGAHLRGRGRPVYSAVRAAV
PQPAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAYRYAQPAAVTGATAAAAAYSDSY
GRVYTTDPYHALTPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctttaatgctgcccgttaatcggggaatcatggac
cgcgatattgagacggcggccgccggagcgcatccgaacgcggccgcaggagccgcggtt
gtccgggggatgaagcgcggtgacccggagccggacgctcagaccgccgctgccctgact
gacctggccggggcggaatgcaagagaccccggatagacggctccggtgacatcggacag
aacaatgagcctttaaaccccggtttccatggatatgcacctcacagtcagggctcccag
gactccaccggaggacaggagggtctagtggccccaccctttacaaccttccctcctcca
ccccctcctcaaaacggcctgactggaacagagtttggcccggggggcatgtttggtgct
gctggtcaggccacagcagaggtcggagccggcggtaacggagccacgaacgcacccaac
agcaacaatggaaagacagaggagacgtcccagggtgaggcgggggcgcagtgttcggca
ggaggtacaggagcaggaggttccgcaggagactctggagaggccaaagggactcccaaa
cgcctccacgtctcaaacatccctttccgcttccgggacccagacctcaggcagatgttt
gggcaattcgggaagattctggatgtagagattattttcaatgagaggggttcaaagggt
tttggctttgtgacatttgaaaacagcgcagacgcagagaaagccagggaaaagctccac
ggcacgcaggtggaagggcgtaagatcgaggtgaataatgccaccgccagggtgatgact
aacaagaaaatcgtcagcccttaccctaatggagaggctctcagcacgctgccctatgca
ggttggaaacttagtcccatggtgggagctgtgtatggacctgagatctacgcagtgcca
gggtttccctacccaaccgcagcagcggcagcagcagccacgacagctgcagcagctttc
cgcggtgcccacctcaggggccgaggtcggcccgtttacagcgccgtcagggctgctgtg
cctcagcctgccatccctgcctaccctggcgtggtgtatcaggatgggttttacggagct
gcagacttatatggaggctatcctgctgctgccgccgcggccgccgctgcatatcgctac
gcccagcctgctgccgtaaccggagcaaccgccgccgctgccgcctacagtgacagttat
ggccgggtttacactacagatccgtaccacgctttaactccagctgctgccgcgtacgga
gtgggagccatggctagtttataccgagcgggatacagcaggtttgctccatactaa
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