Cyprinodon variegatus (sheepshead minnow): 107098722
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Entry
107098722 CDS
T06110
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107098722
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107098722
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107098722
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107098722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
Sec7-like_HUS
Cnd1
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
107098722
NCBI-ProteinID:
XP_015252027
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MEPSMESCLAQVLQKDVGRRLQTGQDIIDYILDQDKSPDLDQDQTALDRMVDGIATSWVN
SSNFKVNLLGLDLLSALVTRLQDRFRAQIGTVLPSLIDRLGDAKDQVREQDQTLLLKIME
QAASPQVGTLSSSVGQLVEEAAIFSPAGQNRPALSRTLNPGPEFWTVGEQLNTSLIRNLE
ATGQGSKVRTLNNLDPTAGGHEGHNQPRTEKLSSMASVEFKPAASSSSADKNFEDEDSVD
GGRSSSSSSSKAPPGGRRPAVSSVRRPSSGSSTKSTGKEAAAGAVDEEDFIKAFDDVPSV
QVGGRVMHVKERSGGRGHACEGTFRWAGSFMRRNVQVGGVMHAKERSGGRGHACEGTFRW
AGHLSSVLQNKFDHGAESVMPTLLNLVPNSAKVMATSGMAAIRLILRHTHYPRLIPIITS
NCSSKSVAVRRRCYEFLDLMLQEWHTNTLERTHSYSRNHDNGRGDVKKQEENREAVHIDR
EEETRGGSGTEQDLVLQEIVVCYWGFHGHYSREAELLFQALESTYQKALQSHLRSSDSVV
SLPQSDRSSSSSQESLNRPLSVKSLIGGSISRSKLVGTRVSSTPGSLQRSRSDIDVNAAS
SAKSRLSSVPASSPFSSAAALPPGSYASLDGVLGKSDGRVRTRRQSSGSVGGASPSVVDS
RGRSRAKVVSQSQRSRSANTVSGKASASSNLLQAPPLFPHVLQSGPSCSSVRLPAAVACF
SLDVAHISCPPAASRRHSRSTSALSTADAHGQSDRYGLIHQARISASVNAMRVLNTGTEV
EAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGLPHYLR
QTEDVAEVLNHCASSNWSERKEGLLGLQTLLKSQRILSRVELKRLCEIFTRMFADPHSKV
ENLPDVCRCSQMESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFV
NSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQDGATK
LLHHHLKNSSNVSSPSNTLGRTVPRHTPSRTSPLTSPTNCSHGGVSPSMTEYDTENMNAE
EIYSSLRGVTEAIQSFSYRSQEDLNEPLPRDGKRDHAVGREGVAPSPGSEARLGLDVVEG
GRTALDNKTSLLNTPSPRSFSGPRTREFSPYGYGDTIYDKSALKEAVFDDDVEQFRDCRR
PESGGIQTSLPKAFPPVGPDNSDLVADLLKELSNHNERCEERKGALVELLKITREDNAAV
WDEHFKTILLLLLETLCDKDHTIRALALRVLKEILRNQPVRFRNYAELTIMKTLEAHKDS
HKEVTGSRRVLNLRSDITPPYLDLLSGPESGSNRPPTRTALIQNIRTTNRQNLRWSSAGP
GAQSQPGGSVPTGGLSPNRGAQSQPGGSVPTGGLSPNRGAQSQPGGSMKLLNLYIKRAQT
TNSNSSSSSDVSSHS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcatggagagctgcttggcccaggttctgcagaaggatgtgggccggcgc
ctgcaaacgggtcaggacatcatcgactacattctggaccaggacaagtccccggacctg
gaccaggaccagacggcgctggaccggatggtggacgggattgccacctcctgggtcaac
tccagcaacttcaaggtgaatctgctgggcttggacctcctgtctgccttggtgacgcgg
ttacaggacagattccgggctcaaatcggaacagttctacccagcctgatcgatcgactg
ggagacgccaaagatcaagttcgagagcaggaccagactctgctgctaaagatcatggag
caggctgcgtctcctcaggtagggactttgtcctcctcagtgggacagttggtggaggaa
gcagctatttttagcccggctggtcagaaccgacccgctttaagccggactctgaaccca
ggtccagagttctggactgtgggggaacagctgaacacaagtctgataagaaacctagag
gctacaggtcaggggtcaaaggtcaggaccctgaacaacctggacccaactgctggaggc
catgagggacacaaccaacccagaacagagaagctgtccagcatggcgagtgtggagttt
aaaccagcggcttcttcttcttctgcagataaaaactttgaggatgaagactcagtggat
ggaggcaggtcctcctcctcctcgtcctccaaggcgcctcctggtgggcggaggccggca
gtgagctcggtgaggagacccagctctggttcatccaccaagtccacaggtaaagaagcc
gcagctggagctgtggacgaagaggacttcatcaaagcgtttgacgacgtgccgtcggtc
caggtaggtgggcgggtcatgcatgtgaaggaacgttcaggtgggcggggtcatgcatgc
gaaggaacgttcaggtgggcggggtcattcatgcgaaggaacgttcaggtgggcggggtc
atgcatgcgaaggaacgttcaggtgggcggggtcatgcatgcgaaggaacgttcaggtgg
gcggggcatctgtcctcggtgctgcagaacaaatttgaccacggagcggagagcgtcatg
cccaccctgctgaacctggtacccaacagcgccaaggtcatggccacgtcagggatggcg
gctatccgcctcatcctgcggcacacccactacccccgcctcatccccatcatcaccagt
aactgctcctccaagtctgtggctgtcaggaggcgctgctatgagttcctggacctcatg
ctgcaggagtggcacaccaacacgctggagaggacacattcctactcccgtaaccatgac
aacgggaggggagacgtcaaaaagcaggaggaaaaccgtgaggctgttcacatcgaccgg
gaagaggagacgagaggagggagtgggactgagcaggatctggtccttcaggagattgtt
gtgtgttactggggtttccatggccactacagccgtgaggcggagcttctgttccaggcg
ctggagtccacctatcagaaggcgctccagtctcacctgaggagctcggacagcgtggtg
tctctgcctcagtcggaccgctcctcctcttcctcccaggagagcctgaaccgaccgtta
tctgtgaagagtctgattggaggcagcatttcaagaagtaaactggtgggtaccagggtt
tcctccacaccggggtccctgcagcgctcccgcagcgacatcgacgtgaacgccgcctcc
agcgccaagtcccgcctgtccagcgtccccgcctcctcgccgttcagctctgcggccgcc
ctccccccaggatcctacgcctctctggacggcgttcttggtaaaagtgacggtcgtgtc
cgtaccagacgccagagctcaggcagcgtgggcggagccagtccctcagtggtggacagc
agggggcgcagtcgagccaaggtggtctcccagtcccagcgatccagatcagccaatacc
gtcagcggtaaggcctcagcttcatccaatctgctccaagctcctcccctttttcctcat
gtgctccaatcagggccgtcctgctcctctgtccgtctgcctgcagctgttgcatgcttc
tctttggacgtggcccacatctcctgtcctcccgcagcctcccgccgtcactcccgttca
accagtgccctgtccacagccgacgcccacggccagtcagatcgctacggtttgatccac
caggcgaggatctctgcgtcggtgaacgccatgcgggtcctgaacaccggcacagaggtg
gaggcggcggtggcggacgctctgctgttaggagactccaggaacaagaggaagccgctg
cggcggcggtacgagtctcctgggatgtactctgatgatgacgccaacagcgacgcctcc
agcgcctgctcagagcgctcctacagctccaggaacgggggcctcccccactacctgcgg
caaacggaggacgtggccgaggtcctgaaccactgcgccagctccaactggtcggagcgc
aaggagggcctgctgggtctgcagaccctcctgaagagccaaagaatcctgagccgagtg
gagctgaagagactctgtgagatcttcaccaggatgtttgcagaccctcacagtaaggta
gagaaccttccagatgtctgtagatgttcccagatggaatcgtttccattcgaccagcag
ttcaacatcttgatgaggttcatcgtggaccagacccagacgccaaacctcaaggtgaag
gtggccatcctgaagtacatcgagtctctggctcggcaaatggaccccacagactttgtg
aactccagcgagactcggctggcggtttcccgcatcataacttggaccactgaacccaaa
agctctgatgtgaggaaggcggcccaggtggttctgatcgccctgtttgagctcaacacc
ccggagttcaccatgctgctgggggcgctgcccaaaaccttccaggacggcgccaccaag
ctgctgcaccaccacctgaagaactccagcaacgtgagttctcccagtaacacgttgggt
cggacggtaccgcgccacacccccagcagaaccagccccctcacctctcccaccaactgt
tcccatggaggagtctcccccagcatgacggagtacgacacagagaacatgaacgctgag
gagatctacagctcgctgcgcggcgtcaccgaggccatccagagcttcagctaccggagc
caggaggacctgaacgagccgctgccacgggacggcaagcgggaccacgccgtgggacgg
gaaggcgtggcgccctctccgggttctgaggcccgtctgggtttggacgtggtggaaggc
ggccgcacggctctggacaacaagacgtcgctgctgaacacgccgtcgccgcgctccttc
tctgggcccaggacccgcgagttctccccgtacggatacggcgacaccatctacgacaag
agcgccctgaaggaggccgtgttcgacgacgacgtggagcagttccgcgactgccggcgg
ccggaatcaggaggaatccagaccagtcttcccaaagcctttcctccggtcggtcccgat
aactcggacctggtggctgacctgctgaaggagctgtccaatcacaacgagcgctgtgag
gagcgtaaaggagccctggtggagctgctgaagatcacacgcgaggacaacgcggcggtg
tgggacgagcactttaagaccatcctgctgctgctgctggagacgctgtgtgataaagac
cacaccatcagggctctggctctgcgagttctgaaggagatcctgaggaaccagccggtc
cgcttcaggaactacgccgagctgaccatcatgaagaccctggaggctcacaaagactct
cataaagaggtgaccgggtccaggagggttctgaacctgaggagtgacatcacgccgcca
tatttggacctcctctcaggtccagagtccggttctaaccgtcctcctaccagaaccgcg
ctgatccaaaacatcaggaccaccaacagacagaacctgcggtggagcagcgccggcccg
ggggctcagtcccaaccggggggctcagtcccaaccggggggctcagtcccaaccgaggg
gctcagtcccaaccggggggctcagtcccaaccggggggctcagtcccaaccggggggct
cagtcccaaccggggggctcaatgaagctcctgaacctctacatcaaacgggcccaaacc
accaacagcaacagcagcagctcctccgacgtctcctcccacagctaa
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integrated database retrieval system
