Cyprinodon variegatus (sheepshead minnow): 107099559
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Entry
107099559 CDS
T06110
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107099559 (dhx57)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107099559 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
RWD
Helicase_C
DEAD
HA2_C
HA2_N
zf-CCCH_4
AAA_22
zf-CCCH
zf_CCCH_4
AAA_19
Torus
nSTAND3
NB-ARC
T2SSE
Viral_helicase1
DUF6857
Motif
Other DBs
NCBI-GeneID:
107099559
NCBI-ProteinID:
XP_015253215
Ensembl:
ENSCVAG00000011692
UniProt:
A0A3Q2E297
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MNARRRGGKPNRGGGRFNKPRGGGGGGGGGSRKGGGAARWDDDDDDFSLDFGPSRSSRAP
KGRGGGGGSRARGRDEGRGRGLRSDRKPLPRSLVNTRIPPKPGNGNRPETSSMPLQRIHM
TSDNQEKLKELLRELQTQDFDEPYDDTGSDYSDKEDEEFDKLDHRDEGQFWVTNDEPVER
AESPAYDPEEEERPTPEPIISLFAIGKLCRYGFDRERAKQALESGGGEFGATLEQLLLQV
FSERYGQKAVFPDDLQGVPMDECLSQRQEEALALAAIYGERFTERIANSVWTVSLDVPFL
SEKPAKITGAAVSKKSREVCKFYLKDRGCRFGDKCRFRHELPGKEKSVTGSSDLDGPSMP
GISSYSPPEYELEVRFPKGSRYPHQAPIVAFSTNDESVGAAGRLCVTERLFEEALSAAKS
GEPVVYTLITLCEDELSMKELLALSHHKYSTPPPMLVPQPTSLSIAKSKSVRSGASEESR
SSSANSRRAAPPATQKTSDVKENGEAEEPEEEVEVEAVPVETESYVNLRKKMESKHSQRV
ENLLPENAKLCREFQRKQSSRRFKSMLEQRRSLPAWQEKEQILDELNRCQVLVVSGMTGC
GKTTQIPQFILDASLCGPAPDVANIICTQPRRISAISVAQRVAQERAESLGNSVGYQIRL
ESVRTSATRLLYCTTGVLLRRLEGDADLRGVSHVIVDEVHERTEESDFLLLVLKDLITKR
QDLKIILMSATLNANLFSEYFYNCPTIHIPGRTFPVDQFFLEDAIAKTGYVIEDGSPYLR
SGKQNSSSTSGRGGKGDPRNMVDDLGDDVWNFMSFYKKDFVKDSVPDQQLNLQELTVRYK
DTKKSVLKTIAAMDLDKINMDLVESLLEWIVDGKHSYPPGAVLVFLPGLAEIKMLYEQLQ
SNRIFNNRRTSRCVVYPLHSTLSNEEQQAVFSRPPEGVTKIIISTNIAETSVTIDDVVYV
IDSGKMKEKRYDASKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTSHCFHHQLAE
QQLPEIQRVPLEQLCLRIKILDLFAEQPLESVFSRLIEPPAEGSLDAARQRLQDLGALTA
DEKLTPLGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEAG
EKKLAFSLANSDHLALLQAYKGWCCAAKNGNQAGFLYCRENFLSWRSLQEIASLKRQFAE
LLSDIGFIKEGLRARVIERLSSKGTDGVLEATGPEANLNSDNIRLMSAMLCAALYPNVVQ
VRAPQGNYKMTSKGAMKMQPKANELRFMTKNDGCVHVHPSSVNYTVRHYDSPYLVYHEKV
KTSRIFIRDCSMVSVYPLVLFGGGQVNVELHKGEFVISLDDGWIRFAAASHQVAELVKEL
RWELDQLLEDKIRNPSMDLCTCPRGSRIIRMIVQLITTQ
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaggagaagaggagggaagccaaacagaggaggaggaaggtttaacaagcca
agaggaggtggaggaggcggtggaggtggaagtcggaagggaggaggagctgctcgctgg
gacgatgatgatgatgatttcagccttgattttggaccgtctcgttccagcagagctcca
aaaggacgcggcggtggcggtggcagccgtgccagggggagagacgaaggacgaggaagg
ggattaagaagtgatagaaagcctctccccaggtccttggtgaataccaggatccctcca
aaaccaggcaatggcaacaggccagagaccagcagcatgcccttacagaggatccatatg
accagtgacaaccaagaaaagctgaaggagttactgcgggaactacagacgcaggatttt
gatgagccttacgatgatactggctccgattattcagataaggaggatgaggaatttgat
aaactggaccaccgtgatgaaggccagttttgggtcaccaatgatgagcctgtggagcga
gcagagagccctgcttatgacccagaggaggaggaacgccccacacctgaacccatcatc
tctttatttgccatcggaaaactctgcagatatggctttgaccgagagagagccaaacag
gctctggagtccggtggaggagaatttggggcgaccttggagcagctcctccttcaagtc
ttcagcgaacgctatggacagaaagccgttttccctgatgacctccagggggtgccgatg
gatgaatgcctgagccagaggcaggaggaagccctggcgcttgctgctatttatggagag
cgcttcacggagcgaatcgccaactctgtgtggacggtttctttggatgtgccgttcctc
tcagagaaaccagctaaaatcacaggagcagctgtgagcaaaaagagccgtgaggtctgc
aaattctacctaaaagaccgcggctgccgcttcggcgacaaatgtcggttcaggcacgaa
ctcccaggaaaggaaaagtctgtgactggttcctcggacctggatggcccaagcatgcct
ggcatcagcagctattcccctccagaatatgagctggaggtccgcttccctaaaggaagc
cgttatcctcatcaggcgccgatagtggctttcagcaccaatgatgagtccgttggagct
gcggggagactctgtgtcaccgagaggttgttcgaagaggcgctgtctgcggcgaaaagc
ggcgagcctgtcgtttacaccctgatcaccttatgtgaggatgagctcagcatgaaggag
cttctagctctcagccatcacaaatacagcacacctccccccatgttggtaccacaaccc
acctctctgtccatcgcaaagagtaagagtgtgaggagcggcgcctcagaggagagcagg
agtagcagcgcaaacagcaggagggccgccccacccgctacccagaaaacatcagatgtg
aaagagaacggagaggcagaggagcctgaagaggaggtggaggttgaagctgtcccagtc
gagacggagagctacgtcaacctgaggaagaagatggagagcaagcacagtcagagggtg
gagaaccttctgccggaaaatgccaagctgtgtcgggaattccagaggaaacagtcttcg
aggcgctttaaatccatgctggagcagcggaggagccttccagcttggcaagaaaaagag
caaatcctggatgagctgaacaggtgtcaggttctggtggtcagtggaatgacggggtgt
ggtaaaaccactcagattcctcagttcatcctggacgcctctctgtgcggccccgcccca
gacgtggccaacatcatctgcacccagcctcgccgtatttctgccatctccgtggctcag
agagtcgcacaggagcgcgccgagtctctggggaactctgtgggctaccagatccgcctg
gagagcgtcaggacatctgccaccaggctgctgtactgcaccacaggcgtgctgctcaga
agactggagggcgacgccgacctcaggggcgtctcgcacgttatcgtggatgaggtgcac
gaaagaacggaagaaagtgacttcctactgttggtgctaaaggatctaattacaaagagg
caagacctgaagattattttaatgagtgccacccttaacgccaacctcttctcagagtat
ttctacaactgtcccaccatccatataccgggacgtactttccctgttgaccagtttttc
cttgaagacgccatcgctaaaactggctatgtcattgaggacggcagcccgtatttacgc
tcagggaaacaaaattcgtcttccacgagtgggcgaggaggtaaaggtgatccgaggaac
atggtggacgatttaggcgatgacgtgtggaacttcatgtctttctataagaaagacttt
gttaaagactctgttccagaccagcagctcaacctgcaggagctcacagttcgatataaa
gatacgaaaaagtctgtccttaaaactattgctgcgatggacctggacaagatcaacatg
gacttggtggagagtctgctggagtggatagtggatggaaaacacagctacccaccaggt
gcggtgttggtgttcctgccgggtctggctgagattaaaatgctctatgagcagctgcag
tccaacaggatttttaacaacaggcgaacatcaaggtgtgtggtgtaccccctccattca
accttatccaacgaggagcagcaggccgtcttcagccgccctcctgagggcgtcacgaag
atcatcatctccaccaacatcgctgagacctccgtcaccatcgacgacgtggtttacgtc
attgactctggcaagatgaaggaaaagaggtatgacgcatccaaaagcatggagagcctg
gaggactcgtgggtgtccagagccaacgcgctgcagaggaaaggtcgagcaggtcgcgtg
gcctctggggtttgcttccatctcttcacaagccactgcttccaccaccagctggctgag
cagcagctgcctgagatccagagagtccctctggagcagctctgcctccgaattaagatc
ctggatttgtttgccgaacagccgctggagtcggtcttctctcggctcatcgagcccccg
gctgaaggcagcctggacgctgccaggcagcgtctccaggacctgggtgctctgaccgca
gatgagaagctgaccccgctgggctaccacctggcctgcctgcctgtcgacgtgcgcata
ggaaaactgatgctgtttggcgccatttttcgctgcctcgacccggcgctcaccatcgcc
gccagtctggcctttaaatctccatttgtgtctccgtgggataagagagaggaagctggc
gagaagaagcttgccttctcattggctaacagtgaccatctggctttgttacaagcatac
aagggttggtgctgcgctgcaaagaacggtaaccaggccggcttcctctactgtagggag
aacttcctgtcctggcgcagtttacaggagatcgccagcctgaagagacagtttgcagag
ctgctgtcggacatcggcttcattaaggagggattgagggccagagttattgaacgtctt
tcctcaaagggaacggatggtgttttagaggctactggacctgaggccaaccttaattcg
gataacatccgtctgatgtctgcaatgctgtgtgcagctctctatccaaacgtcgtccag
gtacgagcacctcaggggaattacaagatgaccagcaagggagcaatgaagatgcaaccg
aaagccaacgagctgcgctttatgaccaagaacgacggctgcgtccacgttcacccatcg
tctgttaactacacggtccgccactatgacagtccctacctggtttaccacgagaaggta
aagacgagccgcattttcatcagggactgcagcatggtgtccgtctacccgctggtgctg
ttcggagggggtcaggtcaacgtggagctgcacaaaggagagtttgtcatctccctggat
gacgggtggatccgattcgctgcagcttcgcatcaggtggctgagctggtaaaggagctg
cgctgggagctggaccagctgctggaagataaaatcaggaacccaagcatggacctatgc
acctgtccccgtggttctcgcatcatccgcatgatcgtccaacttataaccactcagtaa
DBGET
integrated database retrieval system
