Crassostrea virginica (eastern oyster): 111101632
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Entry
111101632 CDS
T09197
Name
(RefSeq) single-minded homolog 2-like
KO
K09100
single-minded
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111101632
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111101632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HLH
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
111101632
NCBI-ProteinID:
XP_022289908
EnsemblRapid:
LOC111101632
UniProt:
A0A8B8AH92
LinkDB
All DBs
Position
6:complement(49805855..49829844)
Genome browser
AA seq
696 aa
AA seq
DB search
MKCKSKTAARTRREKENAEFYELAKLLPLPSAITSQLDKASIIRLCTSYLKMRTVFPDGL
GDGWGQRSPPRTLLEKELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQIELTGS
SIFEYIHPSDHEEMTAVLTYNPTFSTSGFPEFEIERSFFIRMKCVLAKRNAGLTSGGYKV
IHCGGYLKIKQFNMEMSPYEGCQQNVGLVAIGHSLPPSAITEMKMFSNMFMFRASLDLKL
IFLDARVAQLTGYEPQDLIERTLYQYIHACDILHMRFAHHTLLLKGQVTTKYYRFLAKDG
GWVWIQSYATIVHNSRSSRPHCIVSVNYVLSEVEARGLQIQLEQTVQKELSPFSTMSGRS
PGKARSAKSKHRRSPYSQSTSNQEFPAEYELVPPEMSSNEYCQIIQPNPHYEDPMGKFEP
LYGPAYPGVFHPDYFPHLPYHPSGQPFVDDRVPCKVESEKYFPYKNMDHLSSCMKSSSPK
LTHLDSSTEGRTNVSPRFEFRSTGPCSRSSSRDAVTGYPYSNHSESSTSEIDVGNEDIEK
RPVAPNFPPNIDTGQNKIKEEQSPKAFPVSDNHSQSRGIQQSVIMRHRPNIEPDVISDTQ
KTLPHNQQEQNFRSPHFNGGDTGMDFHGIQDRNFNAQDIYTHCLRASCAYNSYNNPTEYG
QTPIPTPKHYSPVPQPGYASVIVDTQQYHLANGYVH
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcaaatccaagacggccgcccgaacaagacgcgagaaagaaaacgccgagttc
tatgaactggcaaagttactccccctgccgtccgccataacgagtcagctggacaaagcc
tccatcataagactatgtaccagttatctcaaaatgaggacggtgttccccgacggtctc
ggggacggctggggtcaaaggtcaccaccacggacgctgttggaaaaagagctcggttct
catttgctgcagaccttggatggttttatctttgtcgtggcaccggatgggaagatcatg
tatatttcagagactgcatccgttcatctgggattatcacagattgagttaaccggaagt
agtatttttgaatacattcacccttctgaccacgaggaaatgaccgctgtgcttacttat
aatccaaccttttcaacttccggttttccagaatttgaaatagagagatccttcttcatc
cgtatgaaatgtgtacttgccaaaagaaatgcgggtctgacgtcaggtggatacaaggta
attcactgcggaggatatctaaaaatcaaacaattcaacatggaaatgtctccttacgaa
gggtgtcaacaaaatgtcgggctagtcgccatcggccattcacttccgcccagtgccatt
acggaaatgaagatgtttagcaatatgtttatgttccgtgccagcctcgatttgaaactc
atttttctggatgcaagggtcgctcagctgacaggttatgaaccccaggacttgattgag
aggaccttgtatcagtatattcacgcctgtgatatcctacacatgagatttgctcaccat
acccttttgttaaagggtcaagttacaactaagtattaccgctttctcgccaaagatggg
ggttgggtttggatacaaagttacgcgactattgtacacaacagcagatcgtctcgtcca
cattgcattgttagtgtcaattatgttttaagtgaagtagaagctagaggtcttcaaatt
cagctggaacaaactgtacagaaagaactctcgccattttcgaccatgtctggaagatct
cctggaaaagcgagatcagcaaaatccaagcatcgccgatccccctactcccaaagcacg
agcaaccaggaattcccagcagaatatgaattagtccctcctgaaatgtcatccaatgaa
tattgccaaatcatccagcccaaccctcactacgaagatccaatggggaaatttgagcct
ctttatggacctgcttatcctggtgtcttccatccggactactttcctcatcttccatat
catccatcaggtcaaccatttgtggacgatcgtgttccctgtaaagtggaatcggagaaa
tactttccttacaaaaatatggatcatttgtcatcgtgcatgaaatcatctagtcccaag
ctgactcatctggattcttcgacagagggcaggactaatgtttcgcctcgttttgaattc
agatccacgggtccttgttcccgcagtagcagtagagacgcagttactgggtatccctat
agtaaccattcggaatcatccacctcagaaattgacgtaggtaacgaagacatagaaaaa
cgccccgtcgctccgaattttccgccaaatattgataccggtcaaaataaaatcaaagaa
gagcaatcaccaaaagcgttcccagtatctgacaatcattcacagtcacgtggtattcaa
caatctgtgatcatgcgccatagaccaaacatcgaacccgatgttatttctgacactcaa
aaaacccttcctcataaccaacaagaacagaattttcgcagccctcattttaacgggggt
gatactggaatggatttccatggtattcaagatcgaaattttaatgctcaagatatttat
acgcattgcttacgtgcatcgtgtgcttacaattcctacaataatcctacggaatatggc
caaaccccgatcccgactccaaaacattactcccctgttcctcaaccgggatatgctagt
gtgattgtggacacgcaacagtatcacttagcgaacggttatgtacattga
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