Crassostrea virginica (eastern oyster): 111103780
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Entry
111103780 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111103780
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111103780
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111103780
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111103780
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111103780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
NlpE
Motif
Other DBs
NCBI-GeneID:
111103780
NCBI-ProteinID:
XP_022292952
EnsemblRapid:
LOC111103780
UniProt:
A0A8B8AN43
LinkDB
All DBs
Position
7:14804369..14840210
Genome browser
AA seq
1429 aa
AA seq
DB search
MVPLMYKALTFCQFFFSRETKKLMARVIFPYNSSLVMFTCPTQVAKHSTYKPTDLGNLLD
QGIGGKEGINVCVADXEKILCIVRDLLDTQSHGTRHTINLPASTSVKEMISVVAKQFGYA
DDTINISYQKQTGTTLHELLLREHEDEKLQDVCTPETKKHNFSIVEKEGTLPQIVERGAS
LETSTSSSGMCESSASGTSSSYFSGASTSASTSTDTYTYPESYSYATAVIKSDTGYVGLV
NQAMTCYLNSLLQTLYMTPEFRNAVYRWEFDGKEDNMSKSIPYQLQKLFLLLQTSKKKAI
ETTDVTRSFGWDSSEVWQQHDVQELCRVMFDALEQKWKKTDQANLINNLYQGKLKDYVKC
LECGNESARLDTYLDIPLVIRPFGSNECHGSVDEALQAFVEPETLDGNNQYFCEKCNRKC
DAHKGLKFVSFPYLLTLQLKRFDFDYTTLHRIKLNDRLTFPAVLNLNHLIEPEQSGSEET
TTSNSLEVSSDEGIEIESSQSLTSSDHSSLSSEAVANDKNNKAAGAKGPYVYELFSIMVH
SGSAAGGHYYAYIKSFRDGQWYSFNDQHVSKITYEDITKTYGGSSTSRGYYSAAYTSSTN
AYMLMYRQIDKQRNKDFIQPENFPEHLKLALQNIKEREEQEIRQRELDKSTCKIKVYYFH
PRERRKIEQKLEVHKDRSLREATAFCLLLEIMFCIVFQLFCIDKSVPMDCCRLVKFDEYQ
DTLECSFENEEDTTMGVLLGGVKQTYNFDLLLETKRPDQVFQEYRPGGVTVKLFVADLQN
DVIQEPPISVRAYHAQTVSEFKKMVAEVLGASSDKMRCVLERFHNDLKFXSVPNKTLKTE
GFFKSNKVYIEFSGEEETSHFTHTHFFRLLDRHQNTIRIHVNLPSTADVEDFLKSSSRHE
QLMKDAKTSVKTPEDSSTCLEIRSKTGSDSLDEGISDRGSDSEIDFKTKRMTLSRSDPSI
YHSCQSIDIGRVSPLGSVSEGRANSPVGHSSSSQDTSTSAEFSVPTNYRGLCNNCEGQED
ATDSLLGDSNGREAVEHGDSDSEQTAPPSPGERVVSDTDFKSEGNWESEYDHDVTITKEE
PSKRYFHIVQNDVDMLTKQRNLTILVDKRITLGAFKTELEPHIGTTSENFKVYRVYSNNQ
EFESIRLTETLSFFEDGKLNIKLGRALKPGEYRVKVYQLLVNDPEPGKFLIDTIFAKGMS
VLESKKLIIPEIKEQCGLEIPIERCRLRKKTWRNPGTVYTDNQIYEDEVHIFANWEVFLQ
ILDGPEELTSTSQLAIFVRRWKPSLYELDTFQEVILSSQTVDDLKKKISEISGIEVEDIE
YAKGRGTFPCDISLLEIHNDLDWSPHVTSLNSWPLYICDDGCVLFYRDKTEKLAELSDSR
KKELQQKENARIARGTVRSSYSPRKERALKIYTDESPTASGSKSAPDLD
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggttcctttgatgtacaaggccttgacgttctgccagttcttcttcagcagggaaacc
aaaaagttgatggccagggtaatatttccatacaactcctctttggtcatgtttacatgt
ccgacacaagttgccaaacacagcacctacaagcccacagatcttgggaatctgcttgat
caaggaatcggaggcaaggaaggcatcaatgtatgtgtagcagatngagagaagattctt
tgtattgttcgtgacttgctggacactcagagtcatgggactcgccacaccatcaactta
ccagcctcaacctcagtcaaggagatgatttcagtggtggccaaacagtttggttatgca
gatgatactattaatatatcttatcagaaacaaacaggaaccacactgcatgagttattg
ttacgagaacatgaagatgagaagctacaggatgtttgtacacctgaaacaaagaagcac
aacttctcaatcgtagagaaagaagggacattaccacaaatagtagagagaggggcttct
ttggaaactagtacctcctcctctggtatgtgcgaatcgagtgcctctggaacctcctcc
tcctacttctctggagcctccacctctgcctcaacctcaacagacacctacacctatcca
gagagctactcttatgctactgctgttatcaaatcagacacaggttatgttggactagtc
aatcaagccatgacctgctatctaaacagccttttacagaccttgtatatgacaccagaa
ttcagaaatgcagtgtatagatgggaatttgatggaaaggaagataacatgtccaaaagc
attccatatcagctacagaagctcttcctcttacttcagacaagtaagaagaaagcaata
gaaacaactgatgtgaccagaagctttggctgggatagcagtgaagtttggcaacaacat
gacgtacaggagttgtgtcgtgtgatgtttgatgctctagaacagaaatggaaaaaaacc
gaccaagcaaacctcataaataatttgtaccagggtaaactcaaggactatgtcaaatgt
ttagagtgtggtaacgagagtgcccgattggatacctaccttgacatacctctggtaatc
aggccatttggttcaaacgagtgccatggcagtgtggatgaagccctccaggcctttgtg
gaaccagaaaccttggatggaaataatcaatacttttgtgagaaatgtaacaggaagtgt
gatgcacacaagggactgaagtttgtctcttttccatacttgttgacgctgcagttgaag
agattcgactttgattacacaaccctgcataggatcaagctgaatgatcgtttgactttt
cctgcagttctgaacttaaaccaccttattgaacctgagcaatcaggttctgaagagact
actacgagtaattctttagaagttagcagtgatgaaggtatagagattgaatccagccaa
tccttgacctcttcagaccattctagtctttcaagtgaagctgttgctaatgacaagaac
aacaaagctgctggggcaaagggtccctatgtatacgagttgttctccataatggtgcat
tcagggagtgctgctggtggtcattattatgcctacatcaagtcttttagagatggccag
tggtatagtttcaatgatcaacatgtttcaaagataacttatgaagacatcaccaaaaca
tatggtggatcaagtacatcaaggggctattactctgcagcatacacaagttcaacaaat
gcttatatgctgatgtacaggcagattgataaacagagaaataaagactttatacagcct
gagaatttcccagagcacctcaaattagccctgcaaaacataaaggaaagggaggagcaa
gagatacgccaaagggagctggacaagtcaacctgcaagataaaagtatactatttccat
ccaagagaaaggaggaaaattgagcagaaactggaagttcacaaagataggagcctgagg
gaggccacagcattttgtctcttgttggaaattatgttctgtatcgtattccagctgttc
tgcatcgacaagtctgttccaatggactgctgtcgcctggtcaagtttgatgagtatcag
gacaccctggaatgctcgtttgaaaatgaggaggacactaccatgggtgtattacttgga
ggggttaaacagacctataactttgatctgcttctagaaacaaaacggccagatcaagtg
tttcaggagtacaggcctggaggtgtgactgtgaagctctttgtggctgaccttcagaat
gatgttatccaagagcctccaatcagtgttcgagcctatcatgctcagacagttagcgag
ttcaagaaaatggtggcagaggtactaggtgcctcctcagataaaatgaggtgtgtttta
gagaggtttcacaatgaccttaaatttntgtctgttcccaacaaaactttgaaaactgaa
ggtttcttcaaaagcaacaaggtgtacattgagttttctggggaagaggagaccagccac
tttacacacacccacttcttcagactgctggatcgccaccagaacacaatccgcattcat
gttaacctcccctctacagctgatgtggaagatttcctgaaatcaagctcccggcatgaa
caactgatgaaggacgccaaaaccagtgtgaaaaccccagaggacagctccacgtgtttg
gaaatccggagtaaaacaggaagtgattcattagatgagggtattagtgatcggggaagt
gatagtgaaatagatttcaaaacaaagagaatgacactgtctagaagtgacccttcaata
tatcacagctgtcagtcaatcgacattggacgcgtcagccctcttggttcagtttcggag
ggacgggccaatagccctgttggacacagtagcagtagtcaggacaccagcaccagtgca
gagtttagtgttccaactaattacaggggtttgtgtaataattgtgaaggacaagaagat
gccacagacagtttactaggagattctaatggtcgagaagcagtagaacatggagatagt
gattctgaacagactgcacccccttcacccggggaacgagtcgtcagtgacacggacttt
aagtccgaaggaaactgggagtcggaatatgatcatgatgtgacaattacaaaagaagaa
ccttcaaaacgatattttcatattgtacagaatgatgtggatatgctgacaaaacaaaga
aatttaaccattttagttgataaaagaattactcttggagctttcaagaccgagttagaa
cctcacataggaacaacttctgaaaattttaaggtttacagagtttactccaataatcaa
gagtttgaaagcatcagattaacagaaaccttgtctttctttgaggatggaaagttaaat
atcaagctgggaagagcactgaaaccaggggagtacagggtgaaagtctaccagctgctg
gtcaatgaccctgagcctgggaagtttttgattgatacaatattcgccaaaggaatgtca
gtgttggagtcaaagaagctgatcatcccggaaatcaaagaacagtgtggactagagatt
cctatagaaagatgtcgcctgagaaaaaagacttggaggaacccaggcacagtgtacact
gacaaccaaatctatgaagacgaggtccatatttttgctaactgggaagtcttcctacag
attctggatggtccagaagagctgacctctacatcacagctagccatttttgttcgtcga
tggaagccaagcttgtatgaacttgacacatttcaagaagttattttgtcttcacaaaca
gtagatgaccttaaaaaaaagatatctgaaattagtggaattgaagtggaggacattgaa
tatgccaagggcagagggacttttccatgtgacatttctctgcttgagattcacaatgac
ttggactggagtccccatgtgacaagcttgaactcctggcctctctacatctgtgatgat
ggctgtgttcttttttaccgagacaaaacggaaaagctggctgaattatcagattcaaga
aagaaagaactacagcaaaaggaaaatgctagaattgcacgaggaacagtgcggtcctct
tactccccaaggaaagaaagagctctgaagatatacactgatgagtcaccaacagcgagt
ggcagcaaatcagcaccagatttagactga
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