Crassostrea virginica (eastern oyster): 111115845
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Entry
111115845 CDS
T09197
Name
(RefSeq) uncharacterized protein LOC111115845
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111115845
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111115845
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111115845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-RING_5
SGL
zf-C3HC4_2
zf-RING_2
Trm112p
DUF3450
TBCA
Motif
Other DBs
NCBI-GeneID:
111115845
NCBI-ProteinID:
XP_022310433
EnsemblRapid:
LOC111115845
UniProt:
A0A8B8C408
LinkDB
All DBs
Position
9:complement(91115048..91121553)
Genome browser
AA seq
661 aa
AA seq
DB search
MDQEFITCRICSRPLSDPCYLECLHDFCKQCIKDDLTQNLSTKLSAYACPVCKQLTETKN
TTPEKWAEQLPASDFVGALTEVHKLKNEDVMCTPCKRKSKTTTGSKWCRTCHEALCSSCI
DVHASLKTTMKHSMMDLHEVKLSGTKSLIFGPNCMKHDQQSLRSFCEDHNELICSLCIGE
KHKQCKQIRTVDEEVKARNYELQEVSSKSANQLQIVQKALKSSLSSLTDVETTRSNLSDK
IKSVRKRVDEILTKCEKKSLEELERIETDLRGKLEQDVDKLESLNEESSHTNQLLEQVKN
YGSNAHILQCLQQVRERSNKNSTAFEEYREVKELPKVTFVINRQLDGLMRTLTSLGDFSI
GENGIGSTESKQSKTPDNQDEQKPGNSERRFKRAENVVSVRTPSDENACVISGILSLPNL
DWLFCDKGNRKLKLYNGKFRMKTEHILEQPPYDITLLGDQIVAVTIPDEMKISIFKILAG
INLQEEIRTKDRCYGISYSSSESKFVVTCPFGSPASLRLLSRNGEELMVLIPEEDHQSLF
LRPLYVRFDNSGNSILVSDSQRNRVTSITRSVYRRFHYTHANLRSPRGLALDSEGGFLVA
GWGSDTVHRVDAGGRCKQEVLSRHDGVISPQAVALSYDQTAFVLSLDESSCRSDFVLLFS
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaatttatcacctgtagaatatgttcaaggcctcttagcgatccttgttac
ttggaatgtctccatgacttctgcaaacaatgcataaaagatgacctgacccagaatctc
agtacgaagctgtctgcatacgcatgcccggtttgcaaacaactgacagagacaaagaac
acaaccccggaaaagtgggcggagcaacttccggccagtgatttcgttggagctttaacg
gaagtgcataaactgaaaaacgaggacgtcatgtgcacgccttgtaaacggaagagcaag
acgacgaccggaagtaaatggtgtcgcacctgtcacgaggcattatgttccagttgcatc
gacgtccatgcttcactgaaaaccacgatgaaacacagcatgatggacctgcacgaagtg
aaacttagcggcacgaagagccttatttttggaccgaactgtatgaaacacgaccaacag
tccctaaggtcattctgtgaagaccacaatgaactcatctgctcgttatgtattggtgaa
aaacacaagcagtgtaagcagataaggacagtggacgaagaagtgaaagccaggaattac
gaacttcaggaagtttcctcaaagtcggcaaaccagctacaaatcgtccaaaaagccctg
aaatcctcgctctcttctctcactgacgtagaaaccactcgttccaacttgagcgacaaa
attaaaagtgttcgtaaacgagtcgatgaaattttgacgaaatgcgaaaagaaatcgttg
gaggagttagaaaggatagaaactgacctccgaggtaaactggaacaggatgtcgacaaa
ttagagtctttgaatgaggagagttctcacacaaaccaacttctcgaacaggtgaagaac
tacggcagcaatgctcacatattgcagtgtctgcaacaggttcgagaaagaagcaacaaa
aattcgacggcgtttgaagagtaccgagaggtcaaagagcttcccaaggtcacctttgtc
atcaatagacagctagacggcctgatgagaaccttgacctctctcggggattttagtatt
ggggaaaatggcatcggttctacagaatcgaaacaatcgaaaaccccggataaccaagac
gaacagaaaccaggaaattccgagagacgatttaagagagcagagaatgtagtgtcagtg
aggacaccgtcggacgagaacgcatgcgtaatcagcggcattttgtctctgccgaaccta
gactggttattttgtgacaaaggtaaccggaagttgaaactgtacaatggcaaatttcgg
atgaaaacggaacatatcttagaacaacctccctatgacatcacactcctgggggatcag
attgtcgcagtgaccattcccgatgagatgaaaatctccatattcaaaattctcgctgga
atcaatctacaagaggaaatacgtaccaaggaccgttgttacggaataagttactcttct
tcagagagcaaatttgtggtcacgtgtccatttggatctccggcatccttacgattgctc
tctcgaaatggagaagaactgatggttctgattcccgaggaagatcaccagtcccttttt
ctcagacctctttacgtcaggttcgataactcggggaactcgatcttggtcagcgacagt
caacgaaaccgcgtgacgtcaattacccgctccgtgtaccggcgattccactacacccac
gcaaacctgaggtcaccgcgcggcctcgctctcgactcggaggggggtttcctggtggcg
ggttgggggtcggacaccgtccatcgcgttgacgcaggcgggagatgtaaacaggaagtg
ctgtctcgccatgacggggtgattagtccgcaggctgtcgctttgtcatacgaccagacg
gcgtttgtgctgtctctagatgaatcaagctgtagaagcgattttgtgcttttattttct
ttgtga
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