Crassostrea virginica (eastern oyster): 111119642
Help
Entry
111119642 CDS
T09197
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04136
Autophagy - other
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111119642
04136 Autophagy - other
111119642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119642
04121 Ubiquitin system [BR:
cvn04121
]
111119642
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111119642
Membrane trafficking [BR:
cvn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
111119642
Ubiquitin system [BR:
cvn04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
111119642
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111119642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
111119642
NCBI-ProteinID:
XP_022315748
EnsemblRapid:
LOC111119642
UniProt:
A0A8B8CIU1
LinkDB
All DBs
Position
2:complement(4071877..4076277)
Genome browser
AA seq
213 aa
AA seq
DB search
MAAGSISEDEFWNSIISFLTLSSKIDRKWMIIDTQNGARYVKKTEIIKDTENKEHPASPM
DNAHIRNNEVEVFKLSKIEDEDSAVFQGEESLDQSILTWEYHILYSQSFSVPVLYFNVHT
QNGKLLSLDEIWKKVPETYQERLSEDRWTFISQQEHPVLGCPYFYLHPCHTAELMKNTPA
VTDKRHYIVAWLSAVGPVVGLNLPLEYGKLCAC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggttcaatttcggaagacgaattttggaacagcattatttcctttttgacg
ctttcaagcaaaatcgacagaaaatggatgatcatagatacccaaaatggtgccagatat
gtaaagaagacagaaattattaaagacacagaaaataaagaacatccggcaagtccaatg
gacaatgctcatataagaaataatgaggttgaagtatttaaactttcaaagattgaagat
gaagattcagcagtatttcagggtgaggagtccttagatcaaagcatcttgacctgggaa
tatcacatcttgtacagtcagagtttcagcgtgccagtattatacttcaatgtgcacaca
caaaatggaaaattgctaagtttggatgaaatttggaagaaagtgccagagacctatcaa
gagaggttgtcagaagatagatggacctttatatcacaacaggagcatccagtacttggt
tgtccatatttttacctacatccttgtcatacagctgaacttatgaaaaacacaccagct
gtaacggataaaaggcattacattgtggcctggctgagtgctgtaggcccagtggtgggc
ttgaaccttcccctggagtatgggaaactgtgtgcttgctaa
DBGET
integrated database retrieval system
