Crassostrea virginica (eastern oyster): 111119946
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Entry
111119946 CDS
T09197
Name
(RefSeq) WD repeat-containing protein 78-like isoform X1
KO
K24723
dynein axonemal intermediate chain 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111119946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111119946
04812 Cytoskeleton proteins [BR:
cvn04812
]
111119946
Cilium and associated proteins [BR:
cvn03037
]
Motile cilia and associated proteins
Dynein arm
111119946
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
111119946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
111119946
NCBI-ProteinID:
XP_022316238
EnsemblRapid:
LOC111119946
UniProt:
A0A8B8CK74
LinkDB
All DBs
Position
2:56942176..56950684
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AA seq
840 aa
AA seq
DB search
MSTSKPRKNQYLNPGASQVTASTTSRKGNVAASVNKSKYGGTGGTIYASARSRSNILSSA
SKRSVTQAEKVVAKPPVQVLDDAGNDVTPLPLLHSDPNTVKKNQSNILADSSAGTPTDLM
SQASIYNTGNVTASTFGGGPFTRSVFSASQGTTSDSMMGEDITEPSQDMSSAWAEIRHKR
EEVKETLTEDDLGKVVNLTLTETETIWLLDMPGTSVSNESEEAPKVKKRNEEYQELKKNR
VGNDQYMERGMNTFNEPAKYKTVQTTKITCVDTGIMASTWDMYDTFEQRDQEIRAKEKEE
EEEGTISRPSSPKEKEEGKGGAKPQPGEPTGLVREDSVKPSVSERPRTESRATMASSVAG
SESVFASRETGVSSVPSEMSAAEEEKIFKSENFQRDLFIMERVVNLNTYQTKQALYRNFP
IIPDIDRESTELGDKQVSMVSDMGPNFDRLWSYSCKLTSGRNISCMSWNKLNPDLIAVGY
GEFEFSDQKSGLICCWCLKNPDYPERVYACKEGVTAIDFSKAYPNLLAVGMYDGGVAIYN
VASMKDEPIIDNFHTPGKHTAPVWHIKWIEKERGSGEESSEVVVSISTDGRVTQWSIRKG
FECYDIMKLKRTPTRMGGKKEKKGEAFISRHAGGMCFDFHTKEPNIYVTGTEDGHIHKCS
CSYNEQYLETYNGHTGPVYKIEWSPFVSDIFLSCSADWSIRLWHQERTQPILNFFSSTKS
VYDVVWSPKSSTVFACVNEGAVEVWDLSISTLDPIITNNPTSGAKKTSVSFSKNSDCILV
GDSKGELTVYQLRSMPEPPTDQEEALRNVIKASLASQLQQDLKKKQEEAKELEKEVDEEI
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgaaacctcgaaaaaatcaatatttgaatccaggtgctagccaggtgact
gccagtaccacatcccgaaaaggaaatgttgctgcctctgtcaacaagagtaaatatgga
ggaacaggggggacaatttatgccagtgctaggtcaagatcaaatatattatcatcagcc
agcaaacggagtgtaacccaggctgaaaaggttgtggccaagcctccagttcaggtactt
gatgatgctggaaatgatgttaccccgttaccacttttacattcagacccaaacactgtg
aagaaaaatcagagcaatattttggctgacagctcagcaggaactccaacagatctgatg
tcccaggcctccatttataacacggggaatgtgacagctagtacatttggaggtggtccc
ttcacaaggtctgtgtttagtgcttctcaagggacaacctcggactccatgatgggtgag
gatatcacagaaccctcccaagacatgtcctcagcctgggcagagatccgtcacaagcgc
gaggaagtgaaggagacactgactgaggatgaccttgggaaggtcgtcaatctgaccttg
actgagacagagaccatctggttactggacatgccaggaacatcagtgtctaatgagtca
gaggaggctcccaaggttaaaaagaggaatgaggaataccaagagttgaagaagaatcgt
gttggaaatgaccaatacatggagagagggatgaacacatttaatgaaccagcaaaatac
aaaactgttcagacaaccaagatcacctgtgtggatactggtattatggcttctacatgg
gatatgtatgacacatttgaacaaagggaccaagaaatcagagctaaagagaaggaagag
gaggaagaagggacgatcagtcggcccagcagccccaaggagaaggaggaagggaagggc
ggggccaagccccagcccggggagcccaccggcctggtccgcgaagattctgtgaagccc
agcgtctctgagcgcccacggacagagagtcgagccaccatggcctcgtcagtagcggga
tccgagagtgtgtttgccagtcgagagacgggcgtgtcgtccgtacccagtgagatgtct
gccgcagaggaggagaaaatcttcaagtctgagaatttccagagagaccttttcatcatg
gagagagttgtcaacttgaacacataccaaaccaaacaggctctgtacagaaacttccct
atcatacccgacattgaccgcgagagcacagaactgggagataagcaggtcagcatggtc
agtgacatggggccgaactttgaccgcctctggtcctactcctgtaagctgaccagtggg
cgcaacatcagctgtatgtcctggaacaagctcaaccccgaccttattgctgtgggatac
ggggaatttgaattttctgatcagaagtctggattgatttgctgttggtgccttaaaaac
cctgattacccagagagagtgtatgcatgtaaggagggagtcacagctattgacttctcc
aaggcctaccccaatctcctggctgtggggatgtacgatgggggtgtggccatatataat
gtggcaagcatgaaggacgaaccaatcatagacaactttcacacccctggtaaacacacg
gcaccagtgtggcacatcaagtggatcgagaaggagcgggggtcaggggaggaatcctca
gaggtcgtggtgtccatctccacggacggccgtgtcacgcagtggtccatcaggaagggc
ttcgagtgctacgacattatgaagctgaaaaggacgcccaccagaatgggaggaaagaaa
gagaagaaaggggaggccttcatctccaggcacgctggaggaatgtgttttgatttccac
accaaagaacccaacatatatgtaacaggaactgaagatggccatattcacaaatgttcg
tgttcatacaatgaacagtacttagagacctacaatggacacacaggacctgtatataag
attgagtggtctccctttgttagcgacattttcttaagctgcagtgccgattggagcata
agattgtggcatcaggaacgaacgcagccaattctcaacttcttctcttcaacaaaatcg
gtgtatgatgtagtctggtctcctaagtcctccacagtgtttgcctgtgtgaatgaaggc
gcagtagaggtgtgggatctcagcatcagcacgttggaccctatcatcaccaataatcca
acatccggagccaaaaagacgtccgtctccttctccaaaaactcagattgtattttggtt
ggtgacagtaaaggggagttaactgtgtatcagctgcgaagcatgccggagccccccaca
gaccaggaggaggcattgaggaatgtgatcaaggcgtccctggccagtcagctccagcag
gacctcaagaagaaacaggaggaggccaaggagctggaaaaggaggtcgacgaggagatc
tag
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