Crassostrea virginica (eastern oyster): 111121906
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Entry
111121906 CDS
T09197
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111121906
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
111121906
TFIIIC, fungi type
111121906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_1
TPR_2
TPR_14
TPR_12
TPR_16
TPR_19
TPR_6
TPR_17
TPR_9
TPR_MalT
ANAPC3
TPR_21
LZ_Tnp_IS66
Motif
Other DBs
NCBI-GeneID:
111121906
NCBI-ProteinID:
XP_022319100
EnsemblRapid:
LOC111121906
UniProt:
A0A8B8CTR0
LinkDB
All DBs
Position
2:complement(46525284..46557216)
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AA seq
930 aa
AA seq
DB search
MEGNEENNVGSHILNVDNTEPCTSGDTTTTYTLLGNVIECTPANVTEEENVHFIEVPNDQ
LANLGLLATVSSDGLHNFSIATEPGPSGFQLVHEDNVNLESSLNMPGLEPTIQYLTGKIS
FSEFSQLMELEDPDPTVDIDDAVQTIHVTNVVMPTQEEKSMEEEEVEEESLAGTTSQSNL
DLNEKSPTKRKRRRKKKYSDLPIHLEGLMGEANIKFAQGDHDKAISICMDIIKMAPEAHM
PFQTLGMIYEDQGDLKKSLQYSLIAAYLNPVDRDSWMRLADLCLDLGDKQQATICYSKAL
KAAPQNPGNLDIYLSRSQLYEELGEKKKALEGYKSMLKITPPQDGERYMEIARTITKHYY
EEDDKVSAMETMRNAFEANSENVTAEDVNLFMELLMTQKMFLQAIEVLVNHCGVVFHLNT
EREWSQEMNLSISLIENGTVKINSVAIPELLPIDLRVKLGICLIQNKYDSLAEFVITQLL
QEDVDEVGDLYLDVAEAYMEQKCFTEAKPILERLVCSQNYNLAAVWLRLADCLNSLGDLE
GAEAAYRQVVEMAPSHIGARMSLSTLQSHLGKHEEALKALNRDESDDLLTKQEKSLLLHK
CMLLYAQGKFDDFHHACKSLLFNMYKDLNNPDFIKAVYCCRSHKTRKEMLQGHFKPGYKD
SSKSDIPVDDLWDLFIKLSELLFNNKRYEDLLEVTTLGMSCPYFMMEPRKVKQAEFMSLL
GCLLTKNEYFAFSHIREICIKEGHKSQAWNLLNQVLLIATENRHNRFCLRYLLTNPDHAP
VGLLNGHNATISGTYKYALGEYVAVLRKCPEDPLVNLCIGLTFIHLAGQKFSSKKHSLFT
QGLTFLNNYMELRGECQETYYNMGRALHQLGLTYAAVHYYKKGLTFPPVVDDEENRFDLT
PQLAYNLMLIYKTSGSEVLAKHIMQRYLVI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaatgaagaaaataacgtggggtctcatatattaaacgttgacaacacagaa
ccctgtacaagtggagataccacaacgacgtatactttgttaggaaatgttattgaatgc
accccagcaaatgtcacggaagaggagaatgttcactttatcgaggttccaaacgaccaa
ttggccaacttaggactactcgcgactgtatcctctgatgggctgcacaacttcagcata
gcaactgagcctggaccttcaggattccagctagtgcatgaagacaatgttaacttagag
tccagtctaaacatgcctgggttagaaccaaccatccagtaccttacagggaagataagc
ttcagtgagttcagtcagctaatggaattggaggatccagatcccactgttgacattgat
gatgcagtacagacaatacatgtgacaaatgttgtcatgccaacacaggaggagaagagt
atggaagaagaggaggtagaggaggagagtctggctggaaccaccagccaatcaaatctt
gatttgaatgaaaagtcccctacaaagagaaaacgtcgaaggaaaaagaaatacagtgat
ttgccaattcacctagagggactgatgggagaggccaacattaaatttgctcaaggagat
catgacaaagcaatatcaatatgcatggatattatcaagatggctccggaggcacacatg
ccttttcagacactgggtatgatttatgaggaccaaggagatctcaagaagtctctgcag
tacagtttgatagcagcgtatctgaatccagtagaccgtgacagctggatgagactggct
gatctatgtctggacctcggagataaacagcaggcaaccatttgttacagtaaagcacta
aaagctgcccctcagaatccaggtaatctggacatataccttagccggagtcagttgtat
gaagagttaggggagaagaagaaggcactggaggggtacaagtccatgctgaagataaca
ccccctcaggatggagagcgatacatggaaatagcaaggacaattactaagcattactat
gaagaagatgacaaggtatccgccatggaaaccatgagaaatgcatttgaggcgaactca
gagaatgtaacagcagaagatgtgaatttgttcatggaactattaatgacacagaaaatg
tttctgcaagccattgaggttttggtgaaccactgtggggttgtcttccatttaaacacg
gagagggaatggagtcaggaaatgaacctcagtatttccctcatagagaatggcactgtc
aaaatcaactctgttgccattcctgaactccttcccattgatttaagagtaaaactagga
atatgtctgatacagaacaaatatgactccttagcagagtttgtcatcacccagcttctt
caagaggatgttgatgaagtcggagacttgtatttagatgtagcagaagcttatatggag
cagaagtgtttcacagaagccaaaccaatcctggaacgactggtctgctcccagaactac
aatctggctgcagtgtggttacgactggctgattgcctgaactcgctgggggatctagag
ggagcggaggctgcatatagacaggtggtagagatggccccctcccacattggggccagg
atgtccctgtctaccttacagtcacacctaggcaagcacgaggaggcactcaaagcactg
aacagggatgagtctgatgacttgttaaccaaacaggagaaatctttgctgctacataag
tgtatgctgctgtatgcacaaggaaaatttgatgattttcaccatgcatgtaaatctcta
ctgtttaacatgtacaaggatctgaataacccagacttcatcaaagctgtttactgctgc
agatctcataagactaggaaagaaatgcttcaaggccatttcaaaccaggatataaagat
tcctcaaagtctgatattcctgttgatgatctgtgggatctattcattaagctttctgaa
ttgctgtttaacaacaagagatatgaggatttattggaagtaacaacccttggaatgtct
tgtccttatttcatgatggaacctaggaaagtgaagcaagctgaattcatgagtttacta
ggctgtttactgaccaaaaatgaatattttgccttcagtcatattagggaaatatgcatt
aaggaaggacataaaagtcaggcttggaatttactgaaccaagttttactgatagccaca
gaaaatagacacaatagattctgtcttagatacctactgactaatccggatcatgcccca
gtaggtttactgaatggccacaatgcaacaatatcagggacatacaagtatgctctagga
gagtatgtggccgtactgaggaagtgccctgaggatcccctagtcaatctctgcatcgga
ctcacctttatccacctggccggacaaaagttctcctccaaaaaacattcactgtttaca
caaggactgacctttctaaacaactacatggagctgaggggagaatgtcaagagacttac
tacaatatgggccgagccctgcatcagctggggttgacatatgcagccgtccactattac
aagaaaggtctaactttcccaccagttgttgatgatgaagagaaccgatttgacttgaca
ccacaactggcctacaatctgatgctgatctacaagaccagtggctcagaggttctcgcc
aaacacatcatgcagcgctacctggtcatatga
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